RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 SHISA2Q6UWI4 295 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 STPG3Q8N7X2 389 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 SLC39A9Q9NUM3 307 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 ANKRD34BA5PLL1 514 aa15.93■□□□□ 0.14
SHISA4-201ENST00000362011 TSPAN15O95858 294 aa15.93■□□□□ 0.14
SHISA4-201ENST00000362011 TOMM40O96008 361 aa15.93■□□□□ 0.14
SHISA4-201ENST00000362011 CD28P10747 220 aa15.93■□□□□ 0.14
SHISA4-201ENST00000362011 GATA2P23769 480 aaPredicted RBP15.93■□□□□ 0.14
SHISA4-201ENST00000362011 ARL3P36405 182 aa15.93■□□□□ 0.14
SHISA4-201ENST00000362011 CDX1P47902 265 aaPredicted RBP15.93■□□□□ 0.14
SHISA4-201ENST00000362011 ELLP55199 621 aaPredicted RBP15.93■□□□□ 0.14
SHISA4-201ENST00000362011 ZNF616Q08AN1 781 aa15.93■□□□□ 0.14
SHISA4-201ENST00000362011 ZNF680Q8NEM1 530 aa15.93■□□□□ 0.14
SHISA4-201ENST00000362011 WFDC12Q8WWY7 111 aa15.93■□□□□ 0.14
SHISA4-201ENST00000362011 OR5B12Q96R08 314 aa15.93■□□□□ 0.14
SHISA4-201ENST00000362011 CHRDL1Q9BU40 450 aa15.93■□□□□ 0.14
SHISA4-201ENST00000362011 PEF1Q9UBV8 284 aaKnown RBP15.93■□□□□ 0.14
SHISA4-201ENST00000362011 PPP5D1E7EU14 171 aa15.92■□□□□ 0.14
SHISA4-201ENST00000362011 LINC00869P0C866 280 aa15.92■□□□□ 0.14
SHISA4-201ENST00000362011 RD3LP0DJH9 198 aa15.92■□□□□ 0.14
SHISA4-201ENST00000362011 ADMP35318 185 aa15.92■□□□□ 0.14
SHISA4-201ENST00000362011 AKR1C8PQ5T2L2 129 aa15.92■□□□□ 0.14
SHISA4-201ENST00000362011 ZNF600Q6ZNG1 722 aa15.92■□□□□ 0.14
SHISA4-201ENST00000362011 TRBV12-3P01733 135 aa15.91■□□□□ 0.14
SHISA4-201ENST00000362011 PSG1P11464 419 aa15.91■□□□□ 0.14
SHISA4-201ENST00000362011 RELQ04864 619 aaPredicted RBP15.91■□□□□ 0.14
SHISA4-201ENST00000362011 ACOT6Q3I5F7 207 aaPredicted RBP15.91■□□□□ 0.14
SHISA4-201ENST00000362011 Q6ZRG5 221 aa15.91■□□□□ 0.14
SHISA4-201ENST00000362011 Q8WTZ3 238 aa15.91■□□□□ 0.14
SHISA4-201ENST00000362011 UBQLN2Q9UHD9 624 aa15.91■□□□□ 0.14
SHISA4-201ENST00000362011 UMAD1C9J7I0 102 aa15.9■□□□□ 0.14
SHISA4-201ENST00000362011 MBP02144 154 aa15.9■□□□□ 0.14
SHISA4-201ENST00000362011 SULT1A2P50226 295 aa15.9■□□□□ 0.14
SHISA4-201ENST00000362011 ZNF767PQ75MW2 155 aa15.9■□□□□ 0.14
SHISA4-201ENST00000362011 C11orf44Q8N8P7 122 aa15.9■□□□□ 0.14
SHISA4-201ENST00000362011 OR51G1Q8NGK1 321 aa15.9■□□□□ 0.14
SHISA4-201ENST00000362011 C4orf3Q8WVX3 66 aa15.9■□□□□ 0.14
SHISA4-201ENST00000362011 PLA2G2EQ9NZK7 142 aa15.9■□□□□ 0.14
SHISA4-201ENST00000362011 TSSC4Q9Y5U2 329 aaPredicted RBP15.9■□□□□ 0.14
SHISA4-201ENST00000362011 GGCTO75223 188 aaKnown RBP15.89■□□□□ 0.13
SHISA4-201ENST00000362011 YIF1AO95070 293 aa15.89■□□□□ 0.13
SHISA4-201ENST00000362011 M6PRP20645 277 aa15.89■□□□□ 0.13
SHISA4-201ENST00000362011 TMEM41BQ5BJD5 291 aa15.89■□□□□ 0.13
SHISA4-201ENST00000362011 FAM74A1Q5RGS3 127 aa15.89■□□□□ 0.13
SHISA4-201ENST00000362011 KLHL30-AS1Q8NEE0 82 aa15.89■□□□□ 0.13
SHISA4-201ENST00000362011 NUDT19A8MXV4 375 aa15.88■□□□□ 0.13
SHISA4-201ENST00000362011 I3L521 148 aa15.88■□□□□ 0.13
SHISA4-201ENST00000362011 BMPR1BO00238 502 aa15.88■□□□□ 0.13
SHISA4-201ENST00000362011 RAB5CP51148 216 aa15.88■□□□□ 0.13
SHISA4-201ENST00000362011 PLP1P60201 277 aa15.88■□□□□ 0.13
SHISA4-201ENST00000362011 RAB2AP61019 212 aa15.88■□□□□ 0.13
SHISA4-201ENST00000362011 LYZP61626 148 aa15.88■□□□□ 0.13
SHISA4-201ENST00000362011 PXDC1Q5TGL8 231 aa15.88■□□□□ 0.13
SHISA4-201ENST00000362011 OR1L4Q8NGR5 311 aa15.88■□□□□ 0.13
SHISA4-201ENST00000362011 CITED2Q99967 270 aaPredicted RBP15.88■□□□□ 0.13
SHISA4-201ENST00000362011 VSIRQ9H7M9 311 aa15.88■□□□□ 0.13
SHISA4-201ENST00000362011 IGHV3-35A0A0C4DH35 117 aa15.87■□□□□ 0.13
SHISA4-201ENST00000362011 WI2-2373I1.2A0A1W2PRP0 233 aa15.87■□□□□ 0.13
SHISA4-201ENST00000362011 COX7A2P2O60397 106 aa15.87■□□□□ 0.13
SHISA4-201ENST00000362011 OR2C1O95371 312 aa15.87■□□□□ 0.13
SHISA4-201ENST00000362011 HSPB1P04792 205 aaKnown RBP15.87■□□□□ 0.13
SHISA4-201ENST00000362011 C18orf65Q6ZTR6 163 aa15.87■□□□□ 0.13
SHISA4-201ENST00000362011 RNF141Q8WVD5 230 aa15.87■□□□□ 0.13
SHISA4-201ENST00000362011 PFDN5Q99471 154 aa15.87■□□□□ 0.13
SHISA4-201ENST00000362011 PUS1Q9Y606 427 aaKnown RBP eCLIP15.87■□□□□ 0.13
SHISA4-201ENST00000362011 IL4P05112 153 aa15.86■□□□□ 0.13
SHISA4-201ENST00000362011 HIST2H2BDQ6DRA6 164 aa15.86■□□□□ 0.13
SHISA4-201ENST00000362011 DPPA3Q6W0C5 159 aa15.86■□□□□ 0.13
SHISA4-201ENST00000362011 OR10G4Q8NGN3 311 aa15.86■□□□□ 0.13
SHISA4-201ENST00000362011 OR10G9Q8NGN4 311 aa15.86■□□□□ 0.13
SHISA4-201ENST00000362011 OR10G7Q8NGN6 311 aa15.86■□□□□ 0.13
SHISA4-201ENST00000362011 OR1B1Q8NGR6 318 aa15.86■□□□□ 0.13
SHISA4-201ENST00000362011 RNF125Q96EQ8 232 aa15.86■□□□□ 0.13
SHISA4-201ENST00000362011 ZNF414Q96IQ9 312 aa15.86■□□□□ 0.13
SHISA4-201ENST00000362011 PBDC1Q9BVG4 233 aa15.86■□□□□ 0.13
SHISA4-201ENST00000362011 RPRMQ9NS64 109 aa15.86■□□□□ 0.13
SHISA4-201ENST00000362011 DOK5Q9P104 306 aa15.86■□□□□ 0.13
SHISA4-201ENST00000362011 TGP01266 2768 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 IGHV4OR15-8A0A075B7B6 117 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 A0A087WW49 117 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 NDUFA4O00483 81 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 RGS13O14921 159 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 HYPMO75409 117 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 OR5G3P0C626 314 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 ORM2P19652 201 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 KRTAP10-3P60369 221 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 GCSAMLQ5JQS6 135 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 FAM122CQ6P4D5 195 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 TOMM20LQ6UXN7 152 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 FAM213BQ8TBF2 198 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 LRRC20Q8TCA0 184 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 GATAD1Q8WUU5 269 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 RNF2Q99496 336 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 ZFAND3Q9H8U3 227 aa15.85■□□□□ 0.13
SHISA4-201ENST00000362011 ELOA3CA0A087WX78 387 aaPredicted RBP15.84■□□□□ 0.13
SHISA4-201ENST00000362011 A0A1W2PRX2 142 aa15.84■□□□□ 0.13
SHISA4-201ENST00000362011 RPEL1Q2QD12 228 aa15.84■□□□□ 0.13
SHISA4-201ENST00000362011 C10orf113Q5VZT2 155 aa15.84■□□□□ 0.13
SHISA4-201ENST00000362011 DNAJC4Q9NNZ3 241 aa15.84■□□□□ 0.13
SHISA4-201ENST00000362011 A0A1W2PPV4 95 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms