RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 GHRHP01286 108 aa3.99□□□□□ -1.77
SCN3A-202ENST00000360093 PRSS2P07478 247 aa3.99□□□□□ -1.77
SCN3A-202ENST00000360093 NEUROG1Q92886 237 aa3.99□□□□□ -1.77
SCN3A-202ENST00000360093 HIST1H4GQ99525 98 aa3.99□□□□□ -1.77
SCN3A-202ENST00000360093 NXT2Q9NPJ8 142 aaKnown RBP3.99□□□□□ -1.77
SCN3A-202ENST00000360093 PSG8Q9UQ74 426 aa3.99□□□□□ -1.77
SCN3A-202ENST00000360093 A0A087WV48 116 aa3.99□□□□□ -1.77
SCN3A-202ENST00000360093 EGR1P18146 543 aa3.99□□□□□ -1.77
SCN3A-202ENST00000360093 C9orf139Q6ZV77 190 aa3.99□□□□□ -1.77
SCN3A-202ENST00000360093 SMIM12Q96EX1 92 aa3.99□□□□□ -1.77
SCN3A-202ENST00000360093 GGTLC1Q9BX51 225 aa3.99□□□□□ -1.77
SCN3A-202ENST00000360093 TNFSF13O75888 250 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 IGHV3-11P01762 117 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 STAG3L3P0CL85 134 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 LYL1P12980 280 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 IGFL2Q6UWQ7 119 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 COQ2Q96H96 371 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 SLC25A39Q9BZJ4 359 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-202ENST00000360093 TRGV2A0A075B6R0 118 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 ZNF98A6NK75 572 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 TOMM40O96008 361 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 MSMBP08118 114 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 FABP2P12104 132 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 RNF114Q9Y508 228 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 DENND4AQ7Z401 1863 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 IGHV3OR16-13A0A075B7E8 117 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 IGHV3-49A0A0A0MS15 119 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 IGHV3-74A0A0B4J1X5 117 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 CBLN1P23435 193 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 PDE6HQ13956 83 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 TEX36Q5VZQ5 186 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 SP5Q6BEB4 398 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-202ENST00000360093 C1QTNF4Q9BXJ3 329 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 LY96Q9Y6Y9 160 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 S4R3C0 116 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 DOCK11Q5JSL3 2073 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 PKDREJQ9NTG1 2253 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 TMEM262E9PQX1 116 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 CD7P09564 240 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 LINC00311Q8N616 119 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 KLHDC3Q9BQ90 382 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 ABCA4P78363 2273 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 OR11H12B2RN74 326 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 H0YIZ8 118 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 H3BUX3 64 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 ORMDL2Q53FV1 153 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 OR11H1Q8NG94 326 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 OR11H2Q8NH07 326 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 RNF166Q96A37 237 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-202ENST00000360093 NDUFB8O95169 186 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 PSG1P11464 419 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 SUMO2P61956 95 aaKnown RBP3.98□□□□□ -1.77
SCN3A-202ENST00000360093 SRSF1Q07955 248 aaKnown RBP eCLIP3.98□□□□□ -1.77
SCN3A-202ENST00000360093 SRSF6Q13247 344 aaKnown RBP3.98□□□□□ -1.77
SCN3A-202ENST00000360093 ZNF585BQ52M93 769 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 OR10J3Q5JRS4 329 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 ZNF562Q6V9R5 426 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 BPESC1Q9GZL8 116 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-202ENST00000360093 RNF224P0DH78 156 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 GATA2P23769 480 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-202ENST00000360093 KIR3DL3Q8N743 410 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 OR10W1Q8NGF6 305 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 TSKUQ8WUA8 353 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 SCGB3A1Q96QR1 104 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 COL8A2P25067 703 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 MEIG1Q5JSS6 88 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 DNLZQ5SXM8 178 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 ST20Q9HBF5 79 aa3.98□□□□□ -1.77
SCN3A-202ENST00000360093 DOCK10Q96BY6 2186 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 IGLV3-9A0A075B6K5 115 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 IGKV1-5P01602 117 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 APOHP02749 345 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-202ENST00000360093 HINT1P49773 126 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-202ENST00000360093 CD24P25063 80 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 SAA4P35542 130 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 KAAG1Q9UBP8 84 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 C7orf71A4D174 169 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 E9PQ18 207 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 CHCHD1Q96BP2 118 aaKnown RBP3.97□□□□□ -1.77
SCN3A-202ENST00000360093 MGST2Q99735 147 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 MDKP21741 143 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-202ENST00000360093 IFI27P40305 119 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-202ENST00000360093 UQCRFS1P47985 274 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 KIAA1644Q3SXP7 199 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 PRSS33Q8NF86 280 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 ANAPC10Q9UM13 185 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 A0A1W2PRX2 142 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 SELLP14151 372 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 FOXL1Q12952 345 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 AGMATQ9BSE5 352 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 SLC17A3O00476 420 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 ZNF138P52744 262 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 PEF1Q9UBV8 284 aaKnown RBP3.97□□□□□ -1.77
SCN3A-202ENST00000360093 ZNF256Q9Y2P7 627 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-202ENST00000360093 DMRT1Q9Y5R6 373 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 TFF1P04155 84 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 SRD5A1P18405 259 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 C1orf122Q6ZSJ8 110 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 ZNF833PQ6ZTB9 187 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms