RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 K7EIM0 57 aa14.49□□□□□ -0.09
PDLIM7-203ENST00000359895 K7EN84 100 aa14.49□□□□□ -0.09
PDLIM7-203ENST00000359895 HNF1AP20823 631 aa14.49□□□□□ -0.09
PDLIM7-203ENST00000359895 CDX1P47902 265 aaPredicted RBP14.49□□□□□ -0.09
PDLIM7-203ENST00000359895 C12orf57Q99622 126 aa14.49□□□□□ -0.09
PDLIM7-203ENST00000359895 FLNCQ14315 2725 aa14.48□□□□□ -0.09
PDLIM7-203ENST00000359895 TENM4Q6N022 2769 aa14.48□□□□□ -0.09
PDLIM7-203ENST00000359895 SMIM6P0DI80 62 aa14.48□□□□□ -0.09
PDLIM7-203ENST00000359895 CX3CL1P78423 397 aa14.48□□□□□ -0.09
PDLIM7-203ENST00000359895 ZNF329Q86UD4 541 aa14.48□□□□□ -0.09
PDLIM7-203ENST00000359895 TTC9CQ8N5M4 171 aa14.48□□□□□ -0.09
PDLIM7-203ENST00000359895 SGMS2Q8NHU3 365 aa14.48□□□□□ -0.09
PDLIM7-203ENST00000359895 CCL19Q99731 98 aa14.48□□□□□ -0.09
PDLIM7-203ENST00000359895 PIMREGQ9BSJ6 248 aa14.48□□□□□ -0.09
PDLIM7-203ENST00000359895 TRAV30A0A087WSZ9 112 aa14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 PSG1P11464 419 aa14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 CNN1P51911 297 aaKnown RBP14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 ZNF48Q96MX3 618 aaPredicted RBP14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 RBM14Q96PK6 669 aaKnown RBP14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 IL36BQ9NZH7 164 aa14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 CDC42EP3Q9UKI2 254 aa14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 NDUFS8O00217 210 aa14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 CLEC12BQ2HXU8 276 aa14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 FBLN7Q53RD9 439 aa14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 TMEM190Q8WZ59 177 aa14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 IGF2BP2-AS1Q96M15 143 aa14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 FAM103A1Q9BTL3 118 aaKnown RBP14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 GSX1Q9H4S2 264 aaPredicted RBP14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 OSTCQ9NRP0 149 aa14.47□□□□□ -0.09
PDLIM7-203ENST00000359895 LRBAP50851 2863 aa14.46□□□□□ -0.09
PDLIM7-203ENST00000359895 IGLV11-55A0A075B6I3 123 aa14.46□□□□□ -0.09
PDLIM7-203ENST00000359895 A0A0U1RQK1 487 aa14.46□□□□□ -0.09
PDLIM7-203ENST00000359895 ZNF320A2RRD8 509 aa14.46□□□□□ -0.09
PDLIM7-203ENST00000359895 PEX7O00628 323 aa14.46□□□□□ -0.09
PDLIM7-203ENST00000359895 GCGP01275 180 aa14.46□□□□□ -0.09
PDLIM7-203ENST00000359895 RD3LP0DJH9 198 aa14.46□□□□□ -0.09
PDLIM7-203ENST00000359895 MYCNOSP40205 109 aa14.46□□□□□ -0.09
PDLIM7-203ENST00000359895 ERVFC1-1P60608 527 aa14.46□□□□□ -0.09
PDLIM7-203ENST00000359895 LYZP61626 148 aa14.46□□□□□ -0.09
PDLIM7-203ENST00000359895 ACTL10Q5JWF8 245 aa14.46□□□□□ -0.09
PDLIM7-203ENST00000359895 FAM168AQ92567 244 aa14.46□□□□□ -0.09
PDLIM7-203ENST00000359895 THYN1Q9P016 225 aa14.46□□□□□ -0.09
PDLIM7-203ENST00000359895 TMEM14CQ9P0S9 112 aa14.46□□□□□ -0.09
PDLIM7-203ENST00000359895 TOMM40O96008 361 aa14.45□□□□□ -0.1
PDLIM7-203ENST00000359895 IGKV1-17P01599 117 aa14.45□□□□□ -0.1
PDLIM7-203ENST00000359895 NBEAP1P0C6P0 100 aa14.45□□□□□ -0.1
PDLIM7-203ENST00000359895 GP9P14770 177 aa14.45□□□□□ -0.1
PDLIM7-203ENST00000359895 SAA4P35542 130 aa14.45□□□□□ -0.1
PDLIM7-203ENST00000359895 RPEL1Q2QD12 228 aa14.45□□□□□ -0.1
PDLIM7-203ENST00000359895 ASPHD1Q5U4P2 390 aa14.45□□□□□ -0.1
PDLIM7-203ENST00000359895 S100A7AQ86SG5 101 aa14.45□□□□□ -0.1
PDLIM7-203ENST00000359895 SPOCK3Q9BQ16 436 aa14.45□□□□□ -0.1
PDLIM7-203ENST00000359895 PITPNC1Q9UKF7 332 aa14.45□□□□□ -0.1
PDLIM7-203ENST00000359895 NPFFO15130 113 aa14.44□□□□□ -0.1
PDLIM7-203ENST00000359895 HLA-DRB1P01911 266 aa14.44□□□□□ -0.1
PDLIM7-203ENST00000359895 MFAP4P55083 255 aa14.44□□□□□ -0.1
PDLIM7-203ENST00000359895 Q8N9W7 124 aa14.44□□□□□ -0.1
PDLIM7-203ENST00000359895 AJUBAQ96IF1 538 aa14.44□□□□□ -0.1
PDLIM7-203ENST00000359895 MRPL27Q9P0M9 148 aaKnown RBP14.44□□□□□ -0.1
PDLIM7-203ENST00000359895 ISLRO14498 428 aa14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 IGLV2-8P01709 118 aa14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 YPEL3P61236 119 aaPredicted RBP14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 RPL19P84098 196 aaKnown RBP14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 FANCD2OSQ96PS1 177 aa14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 SLC25A39Q9BZJ4 359 aaPredicted RBP14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 RNF24Q9Y225 148 aa14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 V9GYV3 84 aa14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 WNK2Q9Y3S1 2297 aa14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 SCGB2A1O75556 95 aa14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 SLC25A5P05141 298 aaKnown RBP14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 S100A2P29034 98 aa14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 RANP62826 216 aaKnown RBP14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 NDPQ00604 133 aa14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 PAX8Q06710 450 aa14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 C10orf105Q8TEF2 133 aa14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 BLNKQ8WV28 456 aa14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 GAR1Q9NY12 217 aaKnown RBP14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 EPDR1Q9UM22 224 aa14.43□□□□□ -0.1
PDLIM7-203ENST00000359895 IGHV7-81A0A0B4J1V7 117 aa14.42□□□□□ -0.1
PDLIM7-203ENST00000359895 GNG7O60262 68 aa14.42□□□□□ -0.1
PDLIM7-203ENST00000359895 HIST1H1BP16401 226 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-203ENST00000359895 RPL15P61313 204 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-203ENST00000359895 OR5I1Q13606 314 aa14.42□□□□□ -0.1
PDLIM7-203ENST00000359895 CLEC2AQ6UVW9 174 aa14.42□□□□□ -0.1
PDLIM7-203ENST00000359895 SMIM12Q96EX1 92 aa14.42□□□□□ -0.1
PDLIM7-203ENST00000359895 TMEM68Q96MH6 324 aa14.42□□□□□ -0.1
PDLIM7-203ENST00000359895 USP9XQ93008 2570 aaPredicted RBP14.41□□□□□ -0.1
PDLIM7-203ENST00000359895 PGPA6NDG6 321 aa14.41□□□□□ -0.1
PDLIM7-203ENST00000359895 VWC2LB2RUY7 222 aa14.41□□□□□ -0.1
PDLIM7-203ENST00000359895 SLC17A3O00476 420 aa14.41□□□□□ -0.1
PDLIM7-203ENST00000359895 HIST1H1EP10412 219 aaKnown RBP14.41□□□□□ -0.1
PDLIM7-203ENST00000359895 TMEM183BQ1AE95 376 aa14.41□□□□□ -0.1
PDLIM7-203ENST00000359895 KLF17Q5JT82 389 aaPredicted RBP14.41□□□□□ -0.1
PDLIM7-203ENST00000359895 FAM120AOSQ5T036 256 aa14.41□□□□□ -0.1
PDLIM7-203ENST00000359895 ZNF600Q6ZNG1 722 aa14.41□□□□□ -0.1
PDLIM7-203ENST00000359895 HIST3H2BBQ8N257 126 aa14.41□□□□□ -0.1
PDLIM7-203ENST00000359895 C5orf17Q8NAS9 161 aa14.41□□□□□ -0.1
PDLIM7-203ENST00000359895 SHANK2-AS3Q9BTD1 123 aa14.41□□□□□ -0.1
PDLIM7-203ENST00000359895 TRAPPC1Q9Y5R8 145 aa14.41□□□□□ -0.1
PDLIM7-203ENST00000359895 DCHS2Q6V1P9 2916 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms