RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 SPTAN1Q13813 2472 aaKnown RBP16.44■□□□□ 0.22
COL13A1-202ENST00000357811 TCRBV4S1A1TA0A5B7 111 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 DIRC3C9JPN6 131 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 APCSP02743 223 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 SLC25A5P05141 298 aaKnown RBP16.44■□□□□ 0.22
COL13A1-202ENST00000357811 C11orf42Q8N5U0 333 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 PRSS33Q8NF86 280 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 NUDT10Q8NFP7 164 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 NUDT11Q96G61 164 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 CHODLQ9H9P2 273 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 PGPA6NDG6 321 aa16.43■□□□□ 0.22
COL13A1-202ENST00000357811 FAM87AP0C7U9 286 aa16.43■□□□□ 0.22
COL13A1-202ENST00000357811 C3orf36Q3SXR2 165 aa16.43■□□□□ 0.22
COL13A1-202ENST00000357811 ZNF841Q6ZN19 808 aa16.43■□□□□ 0.22
COL13A1-202ENST00000357811 RNASE6Q93091 150 aaKnown RBP16.43■□□□□ 0.22
COL13A1-202ENST00000357811 TRAV9-1A0A075B6T8 112 aa16.43■□□□□ 0.22
COL13A1-202ENST00000357811 AMY1AP04745 511 aa16.43■□□□□ 0.22
COL13A1-202ENST00000357811 COMPP49747 757 aaPredicted RBP16.43■□□□□ 0.22
COL13A1-202ENST00000357811 FXYD5Q96DB9 178 aa16.43■□□□□ 0.22
COL13A1-202ENST00000357811 COTL1Q14019 142 aa16.42■□□□□ 0.22
COL13A1-202ENST00000357811 GDF5OSQ5U4N7 250 aa16.42■□□□□ 0.22
COL13A1-202ENST00000357811 Q0VG73 95 aa16.42■□□□□ 0.22
COL13A1-202ENST00000357811 LCN12Q6JVE5 192 aa16.42■□□□□ 0.22
COL13A1-202ENST00000357811 Q71RC1 249 aaPredicted RBP16.42■□□□□ 0.22
COL13A1-202ENST00000357811 ZNF586Q9NXT0 402 aa16.42■□□□□ 0.22
COL13A1-202ENST00000357811 SMIM27A0A1W2PRY6 76 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 VMA21Q3ZAQ7 101 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 TCF24Q7RTU0 167 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 PDPNQ86YL7 162 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 KIR3DL3Q8N743 410 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 VSTM2AQ8TAG5 236 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 ST6GALNAC6Q969X2 333 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 C19orf24Q9BVV8 132 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 MRPL32Q9BYC8 188 aaKnown RBP16.41■□□□□ 0.22
COL13A1-202ENST00000357811 E7EQL1 145 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 SUB1P53999 127 aaKnown RBP eCLIP16.41■□□□□ 0.22
COL13A1-202ENST00000357811 BPIFB3P59826 476 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 WDR73Q6P4I2 378 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 NUP35Q8NFH5 326 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 TMEM186Q96B77 213 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 IGHV1-8P0DP01 117 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 UBE2G1P62253 170 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 MAJINQ3KP22 176 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 ETFRF1Q6IPR1 90 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 HIGD1CA8MV81 97 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 LY6HO94772 140 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 TMEM183BQ1AE95 376 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 TEX43Q6ZNM6 134 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 OR2D3Q8NGH3 330 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 MIEN1Q9BRT3 115 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 TRAV8-1A0A0A6YYK1 113 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 M0QZ24 198 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 OR1L4Q8NGR5 311 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 ARL2-SNX15V9GYD0 113 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 RPL19P84098 196 aaKnown RBP16.39■□□□□ 0.21
COL13A1-202ENST00000357811 MRGPRG-AS1Q2M3A8 158 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 LINC00322Q6ZN03 302 aaPredicted RBP16.39■□□□□ 0.21
COL13A1-202ENST00000357811 KCNS1Q96KK3 526 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 S4R3C0 116 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 IGLC7A0M8Q6 106 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 IZUMO1RA6ND01 250 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 VWC2LB2RUY7 222 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 ZNF835Q9Y2P0 537 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 COL12A1Q99715 3063 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 TRBV9A0A0B4J1U6 114 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 MT-ND6P03923 174 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 Q8NA96 180 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 RNASE8Q8TDE3 154 aaKnown RBP16.38■□□□□ 0.21
COL13A1-202ENST00000357811 FBXL15Q9H469 300 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 ESDP10768 282 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 FOXA3P55318 350 aaPredicted RBP16.38■□□□□ 0.21
COL13A1-202ENST00000357811 TBR1Q16650 682 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 PNKDQ8N490 385 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 TSKUQ8WUA8 353 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 MAP1AP78559 2803 aaPredicted RBP16.38■□□□□ 0.21
COL13A1-202ENST00000357811 ZNF324O75467 553 aaPredicted RBP16.38■□□□□ 0.21
COL13A1-202ENST00000357811 FSTL3O95633 263 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 HLA-DQA1P01909 254 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 PMCHL1Q16048 86 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 C3orf79P0CE67 100 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 LYZP61626 148 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 TMEM155Q4W5P6 130 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 SPACA3Q8IXA5 215 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 LINC01560Q8TB33 94 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 IGHV1-69-2A0A0G2JMI3 117 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 A0A1W2PRD5 423 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 A0A1W2PRF3 423 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 A0A1W2PRM7 423 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 NBEAP1P0C6P0 100 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 RPL27AP46776 148 aaKnown RBP16.37■□□□□ 0.21
COL13A1-202ENST00000357811 ZNF137PP52743 207 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 TMEM30BQ3MIR4 351 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 RNASEKQ6P5S7 137 aaKnown RBP16.37■□□□□ 0.21
COL13A1-202ENST00000357811 Q8N976 141 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 C18orf32Q8TCD1 76 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 RALYQ9UKM9 306 aaKnown RBP16.37■□□□□ 0.21
COL13A1-202ENST00000357811 INSIG2Q9Y5U4 225 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 SH2D7A6NKC9 451 aaPredicted RBP16.36■□□□□ 0.21
COL13A1-202ENST00000357811 ATP5IP56385 69 aaPredicted RBP16.36■□□□□ 0.21
COL13A1-202ENST00000357811 MMDQ15546 238 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms