RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 RBMXL3Q8N7X1 1067 aaKnown RBP12.42□□□□□ -0.42
LMNA-201ENST00000347559 CT45A3Q8NHU0 189 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 PRNDQ9UKY0 176 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 TEX50A0A1B0GTY4 177 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 MGST3O14880 152 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 IGKV1-16P04430 117 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 FAM87AP0C7U9 286 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 FABP2P12104 132 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 PATE2Q6UY27 113 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 NPIPB3Q92617 1050 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 GUCD1Q96NT3 240 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 FNDC10F2Z333 226 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 FAM106CPP0CH98 169 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 FGF6P10767 208 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 COL8A1P27658 744 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 FAM106AQ4KMX7 169 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 LINC00305Q7Z4B0 112 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 FXYD5Q96DB9 178 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 NDFIP1Q9BT67 221 aa12.41□□□□□ -0.42
LMNA-201ENST00000347559 TRAV8-1A0A0A6YYK1 113 aa12.4□□□□□ -0.42
LMNA-201ENST00000347559 F2RL2O00254 374 aa12.4□□□□□ -0.42
LMNA-201ENST00000347559 RNASE2P10153 161 aaKnown RBP12.4□□□□□ -0.42
LMNA-201ENST00000347559 CSN1S1P47710 185 aa12.4□□□□□ -0.42
LMNA-201ENST00000347559 UBALD2Q8IYN6 164 aa12.4□□□□□ -0.42
LMNA-201ENST00000347559 RND1Q92730 232 aa12.4□□□□□ -0.42
LMNA-201ENST00000347559 SIGMAR1Q99720 223 aa12.4□□□□□ -0.42
LMNA-201ENST00000347559 FAM173AQ9BQD7 235 aa12.4□□□□□ -0.42
LMNA-201ENST00000347559 CALYQ9NYX4 217 aa12.4□□□□□ -0.42
LMNA-201ENST00000347559 ZNRD1Q9P1U0 126 aa12.4□□□□□ -0.42
LMNA-201ENST00000347559 ZNF257Q9Y2Q1 563 aa12.4□□□□□ -0.42
LMNA-201ENST00000347559 SRRM4A7MD48 611 aaKnown RBP12.4□□□□□ -0.42
LMNA-201ENST00000347559 OR5A1Q8NGJ0 315 aa12.4□□□□□ -0.42
LMNA-201ENST00000347559 FLYWCH2Q96CP2 140 aaKnown RBP12.4□□□□□ -0.42
LMNA-201ENST00000347559 ASCL2Q99929 193 aa12.4□□□□□ -0.43
LMNA-201ENST00000347559 TTTY12Q9BZ98 90 aa12.4□□□□□ -0.43
LMNA-201ENST00000347559 PSMB11A5LHX3 300 aa12.39□□□□□ -0.43
LMNA-201ENST00000347559 HSD52Q0P140 79 aa12.39□□□□□ -0.43
LMNA-201ENST00000347559 ITLN1Q8WWA0 313 aa12.39□□□□□ -0.43
LMNA-201ENST00000347559 CEP192Q8TEP8 1941 aa12.39□□□□□ -0.43
LMNA-201ENST00000347559 CADP27708 2225 aa12.39□□□□□ -0.43
LMNA-201ENST00000347559 DSPP15924 2871 aaKnown RBP12.39□□□□□ -0.43
LMNA-201ENST00000347559 IGKV1D-17A0A075B6S4 117 aa12.39□□□□□ -0.43
LMNA-201ENST00000347559 UPK2O00526 184 aa12.39□□□□□ -0.43
LMNA-201ENST00000347559 CACNG7P62955 275 aa12.39□□□□□ -0.43
LMNA-201ENST00000347559 SAMD5Q5TGI4 173 aa12.39□□□□□ -0.43
LMNA-201ENST00000347559 Q71RC1 249 aaPredicted RBP12.39□□□□□ -0.43
LMNA-201ENST00000347559 PCP2Q8IVA1 136 aa12.39□□□□□ -0.43
LMNA-201ENST00000347559 CIARTQ8N365 385 aaPredicted RBP12.39□□□□□ -0.43
LMNA-201ENST00000347559 TSSC4Q9Y5U2 329 aaPredicted RBP12.39□□□□□ -0.43
LMNA-201ENST00000347559 PLXNB1O43157 2135 aa12.38□□□□□ -0.43
LMNA-201ENST00000347559 C9orf172C9J069 976 aa12.38□□□□□ -0.43
LMNA-201ENST00000347559 APOBEC3AP31941 199 aaPredicted RBP12.38□□□□□ -0.43
LMNA-201ENST00000347559 LOXL1Q08397 574 aaPredicted RBP12.38□□□□□ -0.43
LMNA-201ENST00000347559 C2orf83Q53S99 150 aa12.38□□□□□ -0.43
LMNA-201ENST00000347559 DHRS13Q6UX07 377 aa12.38□□□□□ -0.43
LMNA-201ENST00000347559 ZNF788Q6ZQV5 615 aa12.38□□□□□ -0.43
LMNA-201ENST00000347559 OR2Z1Q8NG97 314 aa12.38□□□□□ -0.43
LMNA-201ENST00000347559 SMAD7O15105 426 aaKnown RBP12.38□□□□□ -0.43
LMNA-201ENST00000347559 GCSHP23434 173 aa12.38□□□□□ -0.43
LMNA-201ENST00000347559 OR1L4Q8NGR5 311 aa12.38□□□□□ -0.43
LMNA-201ENST00000347559 DEFB127Q9H1M4 99 aa12.38□□□□□ -0.43
LMNA-201ENST00000347559 WFDC3Q8IUB2 231 aa12.37□□□□□ -0.43
LMNA-201ENST00000347559 SOX21Q9Y651 276 aaPredicted RBP12.37□□□□□ -0.43
LMNA-201ENST00000347559 A0A1B0GV72 72 aa12.37□□□□□ -0.43
LMNA-201ENST00000347559 IFI27P40305 119 aaPredicted RBP12.37□□□□□ -0.43
LMNA-201ENST00000347559 FAM201AQ5SY85 155 aa12.37□□□□□ -0.43
LMNA-201ENST00000347559 ZNF784Q8NCA9 323 aaPredicted RBP12.37□□□□□ -0.43
LMNA-201ENST00000347559 PRSS22Q9GZN4 317 aa12.37□□□□□ -0.43
LMNA-201ENST00000347559 M0R296 226 aa12.37□□□□□ -0.43
LMNA-201ENST00000347559 ARMS2P0C7Q2 107 aa12.37□□□□□ -0.43
LMNA-201ENST00000347559 FCGR2BP31994 310 aaPredicted RBP12.37□□□□□ -0.43
LMNA-201ENST00000347559 PSG3Q16557 428 aa12.37□□□□□ -0.43
LMNA-201ENST00000347559 ABHD17BQ5VST6 288 aa12.37□□□□□ -0.43
LMNA-201ENST00000347559 ZADH2Q8N4Q0 377 aa12.37□□□□□ -0.43
LMNA-201ENST00000347559 hADV38S2A0JD32 116 aa12.36□□□□□ -0.43
LMNA-201ENST00000347559 SAA1P0DJI8 122 aaPredicted RBP12.36□□□□□ -0.43
LMNA-201ENST00000347559 BOD1L2Q8IYS8 172 aa12.36□□□□□ -0.43
LMNA-201ENST00000347559 SAP25Q8TEE9 199 aa12.36□□□□□ -0.43
LMNA-201ENST00000347559 ZNF714Q96N38 554 aa12.36□□□□□ -0.43
LMNA-201ENST00000347559 MLST8Q9BVC4 326 aa12.36□□□□□ -0.43
LMNA-201ENST00000347559 SERTM2A0A1B0GWG4 89 aa12.36□□□□□ -0.43
LMNA-201ENST00000347559 K7ERJ3 54 aa12.36□□□□□ -0.43
LMNA-201ENST00000347559 ADAMTSL5Q6ZMM2 481 aa12.36□□□□□ -0.43
LMNA-201ENST00000347559 PRNTQ86SH4 94 aa12.36□□□□□ -0.43
LMNA-201ENST00000347559 PPP1R35Q8TAP8 253 aa12.36□□□□□ -0.43
LMNA-201ENST00000347559 INSIG2Q9Y5U4 225 aa12.36□□□□□ -0.43
LMNA-201ENST00000347559 TANC2Q9HCD6 1990 aa12.36□□□□□ -0.43
LMNA-201ENST00000347559 K7EMI3 77 aa12.35□□□□□ -0.43
LMNA-201ENST00000347559 DLL1O00548 723 aa12.35□□□□□ -0.43
LMNA-201ENST00000347559 SMIM17P0DL12 118 aa12.35□□□□□ -0.43
LMNA-201ENST00000347559 ERHP84090 104 aaKnown RBP12.35□□□□□ -0.43
LMNA-201ENST00000347559 C10orf55Q5SWW7 151 aa12.35□□□□□ -0.43
LMNA-201ENST00000347559 PIP4P2Q8N4L2 257 aa12.35□□□□□ -0.43
LMNA-201ENST00000347559 SRSF12Q8WXF0 261 aaKnown RBP12.35□□□□□ -0.43
LMNA-201ENST00000347559 MRPL36Q9P0J6 103 aaKnown RBP12.35□□□□□ -0.43
LMNA-201ENST00000347559 C19orf71A6NCJ1 209 aa12.35□□□□□ -0.43
LMNA-201ENST00000347559 E7EUB6 86 aa12.35□□□□□ -0.43
LMNA-201ENST00000347559 WFDC12Q8WWY7 111 aa12.35□□□□□ -0.43
LMNA-201ENST00000347559 PPIAL4EA0A075B759 164 aa12.35□□□□□ -0.43
LMNA-201ENST00000347559 IGHV3-21A0A0B4J1V1 117 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms