RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ZNF674Q2M3X9 581 aa10.62□□□□□ -0.71
CDC42-202ENST00000344548 IGHV4-59P01825 116 aa10.61□□□□□ -0.71
CDC42-202ENST00000344548 C8orf88P0DMB2 117 aa10.61□□□□□ -0.71
CDC42-202ENST00000344548 PARLQ9H300 379 aa10.61□□□□□ -0.71
CDC42-202ENST00000344548 TECRQ9NZ01 308 aaKnown RBP10.61□□□□□ -0.71
CDC42-202ENST00000344548 ZNF727A8MUV8 499 aa10.61□□□□□ -0.71
CDC42-202ENST00000344548 TSPAN4O14817 238 aa10.61□□□□□ -0.71
CDC42-202ENST00000344548 C9orf152Q5JTZ5 239 aa10.61□□□□□ -0.71
CDC42-202ENST00000344548 OR5AU1Q8NGC0 362 aa10.61□□□□□ -0.71
CDC42-202ENST00000344548 ISOC2Q96AB3 205 aa10.61□□□□□ -0.71
CDC42-202ENST00000344548 ZNF414Q96IQ9 312 aa10.61□□□□□ -0.71
CDC42-202ENST00000344548 MS4A10Q96PG2 267 aa10.61□□□□□ -0.71
CDC42-202ENST00000344548 FBXL7Q9UJT9 491 aa10.61□□□□□ -0.71
CDC42-202ENST00000344548 FSHBP01225 129 aa10.6□□□□□ -0.71
CDC42-202ENST00000344548 LYZP61626 148 aa10.6□□□□□ -0.71
CDC42-202ENST00000344548 FAM110DQ8TAY7 271 aaPredicted RBP10.6□□□□□ -0.71
CDC42-202ENST00000344548 SUN5Q8TC36 379 aa10.6□□□□□ -0.71
CDC42-202ENST00000344548 NOL4LQ96MY1 436 aaPredicted RBP10.6□□□□□ -0.71
CDC42-202ENST00000344548 C19orf24Q9BVV8 132 aa10.6□□□□□ -0.71
CDC42-202ENST00000344548 AKAP9Q99996 3911 aa10.6□□□□□ -0.71
CDC42-202ENST00000344548 SCO2A0A1W2PP80 73 aa10.6□□□□□ -0.71
CDC42-202ENST00000344548 NDUFB4O95168 129 aa10.6□□□□□ -0.71
CDC42-202ENST00000344548 C19orf54Q5BKX5 351 aa10.6□□□□□ -0.71
CDC42-202ENST00000344548 PRSS57Q6UWY2 283 aa10.6□□□□□ -0.71
CDC42-202ENST00000344548 OR1L6Q8NGR2 347 aa10.6□□□□□ -0.71
CDC42-202ENST00000344548 ZNF48Q96MX3 618 aaPredicted RBP10.6□□□□□ -0.71
CDC42-202ENST00000344548 NIPSNAP3BQ9BS92 247 aa10.6□□□□□ -0.71
CDC42-202ENST00000344548 CUBNO60494 3623 aa10.6□□□□□ -0.71
CDC42-202ENST00000344548 IGHV3-35A0A0C4DH35 117 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 PGPEP1LA6NFU8 196 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 OR2T8A6NH00 312 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 TMEM250H0YL14 139 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 J3QLI3 93 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 RD3LP0DJH9 198 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 TVP23CQ96ET8 276 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 PFDN5Q99471 154 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 SMIM7Q9BQ49 75 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 CHRDL1Q9BU40 450 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 MRPL32Q9BYC8 188 aaKnown RBP10.59□□□□□ -0.71
CDC42-202ENST00000344548 SDF2L1Q9HCN8 221 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 AURKAIP1Q9NWT8 199 aaPredicted RBP10.59□□□□□ -0.71
CDC42-202ENST00000344548 C21orf62Q9NYP8 219 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 TRBV20OR9-2A0A075B6H5 130 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 GGTLC3B5MD39 225 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 SMAD7O15105 426 aaKnown RBP10.59□□□□□ -0.71
CDC42-202ENST00000344548 ADMP35318 185 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 PLP1P60201 277 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 RHOGP84095 191 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 C15orf32Q32M92 178 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 PQLC2Q6ZP29 291 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 ZNF491Q8N8L2 437 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 OR1L4Q8NGR5 311 aa10.59□□□□□ -0.71
CDC42-202ENST00000344548 TRBV9A0A0B4J1U6 114 aa10.58□□□□□ -0.72
CDC42-202ENST00000344548 H3BTX0 84 aa10.58□□□□□ -0.72
CDC42-202ENST00000344548 GNG7O60262 68 aa10.58□□□□□ -0.72
CDC42-202ENST00000344548 HYPMO75409 117 aa10.58□□□□□ -0.72
CDC42-202ENST00000344548 CTSGP08311 255 aa10.58□□□□□ -0.72
CDC42-202ENST00000344548 MFAP4P55083 255 aa10.58□□□□□ -0.72
CDC42-202ENST00000344548 USF2Q15853 346 aaPredicted RBP10.58□□□□□ -0.72
CDC42-202ENST00000344548 Q56UQ5 140 aa10.58□□□□□ -0.72
CDC42-202ENST00000344548 IL17RELQ6ZVW7 336 aa10.58□□□□□ -0.72
CDC42-202ENST00000344548 NANPQ8TBE9 248 aa10.58□□□□□ -0.72
CDC42-202ENST00000344548 FXYD5Q96DB9 178 aa10.58□□□□□ -0.72
CDC42-202ENST00000344548 IGHV3OR16-8A0A075B7F1 116 aa10.58□□□□□ -0.72
CDC42-202ENST00000344548 ELOA3CA0A087WX78 387 aaPredicted RBP10.58□□□□□ -0.72
CDC42-202ENST00000344548 TAGLN2P37802 199 aaKnown RBP10.58□□□□□ -0.72
CDC42-202ENST00000344548 BPIFB3P59826 476 aa10.58□□□□□ -0.72
CDC42-202ENST00000344548 UBE2L3P68036 154 aaKnown RBP10.58□□□□□ -0.72
CDC42-202ENST00000344548 TMEM95Q3KNT9 176 aa10.58□□□□□ -0.72
CDC42-202ENST00000344548 C16orf82Q7Z2V1 217 aa10.58□□□□□ -0.72
CDC42-202ENST00000344548 MRPL27Q9P0M9 148 aaKnown RBP10.58□□□□□ -0.72
CDC42-202ENST00000344548 TRAV41A0A0B4J266 112 aa10.57□□□□□ -0.72
CDC42-202ENST00000344548 IER3P46695 156 aa10.57□□□□□ -0.72
CDC42-202ENST00000344548 TAS2R45P59539 299 aa10.57□□□□□ -0.72
CDC42-202ENST00000344548 CCDC140Q96MF4 163 aa10.57□□□□□ -0.72
CDC42-202ENST00000344548 PAXXQ9BUH6 204 aa10.57□□□□□ -0.72
CDC42-202ENST00000344548 OR51M1Q9H341 326 aa10.57□□□□□ -0.72
CDC42-202ENST00000344548 IGHG2P01859 326 aa10.56□□□□□ -0.72
CDC42-202ENST00000344548 IL4P05112 153 aa10.56□□□□□ -0.72
CDC42-202ENST00000344548 RPL23P62829 140 aaKnown RBP10.56□□□□□ -0.72
CDC42-202ENST00000344548 SUMO1P63165 101 aaKnown RBP10.56□□□□□ -0.72
CDC42-202ENST00000344548 KLK9Q2XQG4 91 aa10.56□□□□□ -0.72
CDC42-202ENST00000344548 LCNL1Q6ZST4 164 aa10.56□□□□□ -0.72
CDC42-202ENST00000344548 SLC25A39Q9BZJ4 359 aaPredicted RBP10.56□□□□□ -0.72
CDC42-202ENST00000344548 TMEM167BQ9NRX6 74 aa10.56□□□□□ -0.72
CDC42-202ENST00000344548 THYN1Q9P016 225 aa10.56□□□□□ -0.72
CDC42-202ENST00000344548 KLK9Q9UKQ9 250 aa10.56□□□□□ -0.72
CDC42-202ENST00000344548 COLCA2A8K830 154 aa10.56□□□□□ -0.72
CDC42-202ENST00000344548 TOMM40O96008 361 aa10.56□□□□□ -0.72
CDC42-202ENST00000344548 GPR183P32249 361 aa10.56□□□□□ -0.72
CDC42-202ENST00000344548 RHEBQ15382 184 aa10.56□□□□□ -0.72
CDC42-202ENST00000344548 ZNF343Q6P1L6 599 aa10.56□□□□□ -0.72
CDC42-202ENST00000344548 ZNF502Q8TBZ5 544 aa10.56□□□□□ -0.72
CDC42-202ENST00000344548 RNF2Q99496 336 aa10.56□□□□□ -0.72
CDC42-202ENST00000344548 WI2-2373I1.2A0A1W2PRP0 233 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 PDE6DO43924 150 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 PRB4P10163 310 aaPredicted RBP10.55□□□□□ -0.72
CDC42-202ENST00000344548 GP9P14770 177 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 CRYBB3P26998 211 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 PPIFP30405 207 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms