RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 OR10W1Q8NGF6 305 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 FUT9Q9Y231 359 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 NAV3Q8IVL0 2385 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 A0A1W2PPQ1 181 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 EREGO14944 169 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 ARL16Q0P5N6 197 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 C5orf64Q2M2E5 130 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 DEFB112Q30KQ8 113 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 TMEM14EPQ6UXP3 125 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 C9orf139Q6ZV77 190 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 RPUSD4Q96CM3 377 aaKnown RBP11.66□□□□□ -0.54
CXCL12-201ENST00000343575 TXNDC17Q9BRA2 123 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 TMEM147Q9BVK8 224 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 SNHG12Q9BXW3 62 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 MXRA5Q9NR99 2828 aa11.65□□□□□ -0.54
CXCL12-201ENST00000343575 PMS2P5A8MQ11 134 aa11.65□□□□□ -0.54
CXCL12-201ENST00000343575 CD5LO43866 347 aa11.65□□□□□ -0.54
CXCL12-201ENST00000343575 PDE6DO43924 150 aa11.65□□□□□ -0.54
CXCL12-201ENST00000343575 FOXL1Q12952 345 aa11.65□□□□□ -0.54
CXCL12-201ENST00000343575 MMD2Q8IY49 270 aa11.65□□□□□ -0.54
CXCL12-201ENST00000343575 RPP25LQ8N5L8 163 aaKnown RBP11.65□□□□□ -0.54
CXCL12-201ENST00000343575 TMEM37Q8WXS4 190 aa11.65□□□□□ -0.54
CXCL12-201ENST00000343575 COMMD5Q9GZQ3 224 aa11.65□□□□□ -0.54
CXCL12-201ENST00000343575 NAGKQ9UJ70 344 aa11.65□□□□□ -0.54
CXCL12-201ENST00000343575 TRAV9-1A0A075B6T8 112 aa11.64□□□□□ -0.55
CXCL12-201ENST00000343575 C15orf62A8K5M9 175 aa11.64□□□□□ -0.55
CXCL12-201ENST00000343575 MDKP21741 143 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-201ENST00000343575 COMPP49747 757 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-201ENST00000343575 PAFAH1B2P68402 229 aa11.64□□□□□ -0.55
CXCL12-201ENST00000343575 SPANXN5Q5MJ07 72 aa11.64□□□□□ -0.55
CXCL12-201ENST00000343575 NECAP1Q8NC96 275 aa11.64□□□□□ -0.55
CXCL12-201ENST00000343575 OR1L8Q8NGR8 309 aa11.64□□□□□ -0.55
CXCL12-201ENST00000343575 ZNF48Q96MX3 618 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-201ENST00000343575 HINT2Q9BX68 163 aa11.64□□□□□ -0.55
CXCL12-201ENST00000343575 CBY1Q9Y3M2 126 aa11.64□□□□□ -0.55
CXCL12-201ENST00000343575 SCGB1D1O95968 90 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 CA2P00918 260 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 AMY1AP04745 511 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 ELLP55199 621 aaPredicted RBP11.63□□□□□ -0.55
CXCL12-201ENST00000343575 WT1-ASQ06250 92 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 TNXAQ16473 311 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 IL17RELQ6ZVW7 336 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 TMEM219Q86XT9 240 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 OR4F5Q8NH21 305 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 CIB3Q96Q77 187 aaPredicted RBP11.63□□□□□ -0.55
CXCL12-201ENST00000343575 OR4F4Q96R69 305 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 SMR3AQ99954 134 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 C20orf144Q9BQM9 153 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 NCBP2LA6PVI3 153 aaKnown RBP11.63□□□□□ -0.55
CXCL12-201ENST00000343575 TEX22C9J3V5 150 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 C17orf112F2Z3M2 114 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 F6UZH7 168 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 INS-IGF2F8WCM5 200 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 H3BUX3 64 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 LINC00614P0C842 121 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 RPL15P61313 204 aaKnown RBP11.63□□□□□ -0.55
CXCL12-201ENST00000343575 NDPQ00604 133 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 ZNF709Q8N972 641 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 OR10G9Q8NGN4 311 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 OR10G7Q8NGN6 311 aa11.63□□□□□ -0.55
CXCL12-201ENST00000343575 HEYLQ9NQ87 328 aaPredicted RBP11.63□□□□□ -0.55
CXCL12-201ENST00000343575 UBE2L5PA0A1B0GUS4 154 aa11.62□□□□□ -0.55
CXCL12-201ENST00000343575 IGLC7A0M8Q6 106 aa11.62□□□□□ -0.55
CXCL12-201ENST00000343575 A6NDX4 124 aa11.62□□□□□ -0.55
CXCL12-201ENST00000343575 RPLP1P05386 114 aaKnown RBP11.62□□□□□ -0.55
CXCL12-201ENST00000343575 PLGLAQ15195 96 aa11.62□□□□□ -0.55
CXCL12-201ENST00000343575 TMEM144Q7Z5S9 345 aa11.62□□□□□ -0.55
CXCL12-201ENST00000343575 TRAPPC1Q9Y5R8 145 aa11.62□□□□□ -0.55
CXCL12-201ENST00000343575 PXMP4Q9Y6I8 212 aa11.62□□□□□ -0.55
CXCL12-201ENST00000343575 PRSS46E5RG02 174 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 GNB1P62873 340 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 CX3CL1P78423 397 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 TEX38Q6PEX7 206 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 SRSF12Q8WXF0 261 aaKnown RBP11.61□□□□□ -0.55
CXCL12-201ENST00000343575 MS4A10Q96PG2 267 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 PLEKHA3Q9HB20 300 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 ANK3Q12955 4377 aaKnown RBP11.61□□□□□ -0.55
CXCL12-201ENST00000343575 IGHV7-81A0A0B4J1V7 117 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 IGHV4-59P01825 116 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 ESDP10768 282 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 IER3P46695 156 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 RPL27AP46776 148 aaKnown RBP11.61□□□□□ -0.55
CXCL12-201ENST00000343575 LY6EQ16553 131 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 ZNF562Q6V9R5 426 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 C5orf56Q8N8D9 126 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 HSPB9Q9BQS6 159 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 SLC25A33Q9BSK2 321 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 ELOVL1Q9BW60 279 aa11.61□□□□□ -0.55
CXCL12-201ENST00000343575 SH2D7A6NKC9 451 aaPredicted RBP11.6□□□□□ -0.55
CXCL12-201ENST00000343575 DLEU1O43261 78 aa11.6□□□□□ -0.55
CXCL12-201ENST00000343575 APELAP0DMC3 54 aa11.6□□□□□ -0.55
CXCL12-201ENST00000343575 RNASE2P10153 161 aaKnown RBP11.6□□□□□ -0.55
CXCL12-201ENST00000343575 EGR2P11161 476 aaPredicted RBP11.6□□□□□ -0.55
CXCL12-201ENST00000343575 AREGP15514 252 aa11.6□□□□□ -0.55
CXCL12-201ENST00000343575 TPPP2P59282 170 aa11.6□□□□□ -0.55
CXCL12-201ENST00000343575 YPEL3P61236 119 aaPredicted RBP11.6□□□□□ -0.55
CXCL12-201ENST00000343575 FXYD3Q14802 87 aa11.6□□□□□ -0.55
CXCL12-201ENST00000343575 VWC2Q2TAL6 325 aa11.6□□□□□ -0.55
CXCL12-201ENST00000343575 MIEN1Q9BRT3 115 aa11.6□□□□□ -0.55
CXCL12-201ENST00000343575 KCNIP2Q9NS61 270 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms