RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 C20orf173Q96LM9 149 aa11.32□□□□□ -0.6
NECTIN1-202ENST00000340882 IGF2BP2-AS1Q96M15 143 aa11.32□□□□□ -0.6
NECTIN1-202ENST00000340882 TP53RKQ96S44 253 aa11.32□□□□□ -0.6
NECTIN1-202ENST00000340882 TMEM208Q9BTX3 173 aa11.32□□□□□ -0.6
NECTIN1-202ENST00000340882 ZNF586Q9NXT0 402 aa11.32□□□□□ -0.6
NECTIN1-202ENST00000340882 CRXO43186 299 aaPredicted RBP11.31□□□□□ -0.6
NECTIN1-202ENST00000340882 TOMM40O96008 361 aa11.31□□□□□ -0.6
NECTIN1-202ENST00000340882 PSG1P11464 419 aa11.31□□□□□ -0.6
NECTIN1-202ENST00000340882 KRTAP10-1P60331 282 aa11.31□□□□□ -0.6
NECTIN1-202ENST00000340882 TTC32Q5I0X7 151 aa11.31□□□□□ -0.6
NECTIN1-202ENST00000340882 COQ8AQ8NI60 647 aa11.31□□□□□ -0.6
NECTIN1-202ENST00000340882 NPIPB3Q92617 1050 aa11.31□□□□□ -0.6
NECTIN1-202ENST00000340882 PDCD10Q9BUL8 212 aa11.31□□□□□ -0.6
NECTIN1-202ENST00000340882 SSR3Q9UNL2 185 aa11.31□□□□□ -0.6
NECTIN1-202ENST00000340882 A8MTW9 85 aa11.3□□□□□ -0.6
NECTIN1-202ENST00000340882 GSTZ1O43708 216 aaPredicted RBP11.3□□□□□ -0.6
NECTIN1-202ENST00000340882 ATP5G1P05496 136 aa11.3□□□□□ -0.6
NECTIN1-202ENST00000340882 RD3LP0DJH9 198 aa11.3□□□□□ -0.6
NECTIN1-202ENST00000340882 PI3P19957 117 aa11.3□□□□□ -0.6
NECTIN1-202ENST00000340882 PSMB9P28065 219 aa11.3□□□□□ -0.6
NECTIN1-202ENST00000340882 S100GP29377 79 aa11.3□□□□□ -0.6
NECTIN1-202ENST00000340882 ID1P41134 155 aa11.3□□□□□ -0.6
NECTIN1-202ENST00000340882 ATP5G3P48201 142 aa11.3□□□□□ -0.6
NECTIN1-202ENST00000340882 AKR1C2P52895 323 aa11.3□□□□□ -0.6
NECTIN1-202ENST00000340882 TSPAN5P62079 268 aa11.3□□□□□ -0.6
NECTIN1-202ENST00000340882 LPCAT3Q6P1A2 487 aa11.3□□□□□ -0.6
NECTIN1-202ENST00000340882 ENY2Q9NPA8 101 aa11.3□□□□□ -0.6
NECTIN1-202ENST00000340882 M0R2Z0 102 aa11.29□□□□□ -0.6
NECTIN1-202ENST00000340882 SLC25A4P12235 298 aa11.29□□□□□ -0.6
NECTIN1-202ENST00000340882 UCP3P55916 312 aa11.29□□□□□ -0.6
NECTIN1-202ENST00000340882 LINC00315P59091 139 aa11.29□□□□□ -0.6
NECTIN1-202ENST00000340882 ESRGQ1W209 222 aa11.29□□□□□ -0.6
NECTIN1-202ENST00000340882 SPATA31B1PQ5VZV4 182 aa11.29□□□□□ -0.6
NECTIN1-202ENST00000340882 EBLN2Q6P2I7 272 aa11.29□□□□□ -0.6
NECTIN1-202ENST00000340882 ACY3Q96HD9 319 aa11.29□□□□□ -0.6
NECTIN1-202ENST00000340882 CBY3A6NI87 242 aa11.28□□□□□ -0.6
NECTIN1-202ENST00000340882 EBAG9O00559 213 aa11.28□□□□□ -0.6
NECTIN1-202ENST00000340882 HTR2BP41595 481 aa11.28□□□□□ -0.6
NECTIN1-202ENST00000340882 HAMPP81172 84 aa11.28□□□□□ -0.6
NECTIN1-202ENST00000340882 SPINK13Q1W4C9 94 aa11.28□□□□□ -0.6
NECTIN1-202ENST00000340882 SP6Q3SY56 376 aa11.28□□□□□ -0.6
NECTIN1-202ENST00000340882 C2orf83Q53S99 150 aa11.28□□□□□ -0.6
NECTIN1-202ENST00000340882 RNF125Q96EQ8 232 aa11.28□□□□□ -0.6
NECTIN1-202ENST00000340882 C17orf77Q96MU5 243 aa11.28□□□□□ -0.6
NECTIN1-202ENST00000340882 PBDC1Q9BVG4 233 aa11.28□□□□□ -0.6
NECTIN1-202ENST00000340882 PGPEP1Q9NXJ5 209 aa11.28□□□□□ -0.6
NECTIN1-202ENST00000340882 A0A1W2PPQ1 181 aa11.27□□□□□ -0.61
NECTIN1-202ENST00000340882 J3QL48 77 aa11.27□□□□□ -0.61
NECTIN1-202ENST00000340882 BAP18Q8IXM2 172 aa11.27□□□□□ -0.61
NECTIN1-202ENST00000340882 OR4C16Q8NGL9 310 aa11.27□□□□□ -0.61
NECTIN1-202ENST00000340882 S100A16Q96FQ6 103 aaKnown RBP11.27□□□□□ -0.61
NECTIN1-202ENST00000340882 CNBD2Q96M20 576 aa11.27□□□□□ -0.61
NECTIN1-202ENST00000340882 ABHD1Q96SE0 405 aa11.27□□□□□ -0.61
NECTIN1-202ENST00000340882 UPK3BQ9BT76 320 aa11.27□□□□□ -0.61
NECTIN1-202ENST00000340882 DOK5Q9P104 306 aa11.27□□□□□ -0.61
NECTIN1-202ENST00000340882 ISLRO14498 428 aa11.26□□□□□ -0.61
NECTIN1-202ENST00000340882 TSPOP30536 169 aa11.26□□□□□ -0.61
NECTIN1-202ENST00000340882 PRSS3P35030 304 aa11.26□□□□□ -0.61
NECTIN1-202ENST00000340882 SPCS3P61009 180 aa11.26□□□□□ -0.61
NECTIN1-202ENST00000340882 RND3P61587 244 aa11.26□□□□□ -0.61
NECTIN1-202ENST00000340882 TMEM69Q5SWH9 247 aa11.26□□□□□ -0.61
NECTIN1-202ENST00000340882 SPARTQ8N0X7 666 aa11.26□□□□□ -0.61
NECTIN1-202ENST00000340882 OR11H7Q8NGC8 314 aa11.26□□□□□ -0.61
NECTIN1-202ENST00000340882 RNASEH2CQ8TDP1 164 aaKnown RBP11.26□□□□□ -0.61
NECTIN1-202ENST00000340882 FCGR1BQ92637 280 aa11.26□□□□□ -0.61
NECTIN1-202ENST00000340882 HEYLQ9NQ87 328 aaPredicted RBP11.26□□□□□ -0.61
NECTIN1-202ENST00000340882 TRAV26-1A0A087WT03 109 aa11.25□□□□□ -0.61
NECTIN1-202ENST00000340882 LOC100506127A0A0U1RQW1 187 aa11.25□□□□□ -0.61
NECTIN1-202ENST00000340882 PGAM2P15259 253 aa11.25□□□□□ -0.61
NECTIN1-202ENST00000340882 PIGPP57054 158 aa11.25□□□□□ -0.61
NECTIN1-202ENST00000340882 ZNF90Q03938 601 aa11.25□□□□□ -0.61
NECTIN1-202ENST00000340882 AARDQ4LEZ3 155 aa11.25□□□□□ -0.61
NECTIN1-202ENST00000340882 GPX8Q8TED1 209 aa11.25□□□□□ -0.61
NECTIN1-202ENST00000340882 RPRMQ9NS64 109 aa11.25□□□□□ -0.61
NECTIN1-202ENST00000340882 TNFRSF18Q9Y5U5 241 aa11.25□□□□□ -0.61
NECTIN1-202ENST00000340882 TRAV12-2A0A075B6T6 113 aa11.24□□□□□ -0.61
NECTIN1-202ENST00000340882 A0A0J9YY99 117 aa11.24□□□□□ -0.61
NECTIN1-202ENST00000340882 C3orf85A0A1B0GTC6 90 aa11.24□□□□□ -0.61
NECTIN1-202ENST00000340882 INSP01308 110 aa11.24□□□□□ -0.61
NECTIN1-202ENST00000340882 TGFBR1P36897 503 aa11.24□□□□□ -0.61
NECTIN1-202ENST00000340882 SUPT4H1P63272 117 aaKnown RBP11.24□□□□□ -0.61
NECTIN1-202ENST00000340882 UBE2NLQ5JXB2 153 aa11.24□□□□□ -0.61
NECTIN1-202ENST00000340882 SLC24A4Q8NFF2 622 aa11.24□□□□□ -0.61
NECTIN1-202ENST00000340882 GNPNAT1Q96EK6 184 aaPredicted RBP11.24□□□□□ -0.61
NECTIN1-202ENST00000340882 BLOC1S6Q9UL45 172 aa11.24□□□□□ -0.61
NECTIN1-202ENST00000340882 MRPS16Q9Y3D3 137 aaKnown RBP11.24□□□□□ -0.61
NECTIN1-202ENST00000340882 IGKV1D-37A0A075B6S9 117 aa11.23□□□□□ -0.61
NECTIN1-202ENST00000340882 DNAH10OSP0CZ25 163 aa11.23□□□□□ -0.61
NECTIN1-202ENST00000340882 HOXA5P20719 270 aa11.23□□□□□ -0.61
NECTIN1-202ENST00000340882 CNN1P51911 297 aaKnown RBP11.23□□□□□ -0.61
NECTIN1-202ENST00000340882 OR5I1Q13606 314 aa11.23□□□□□ -0.61
NECTIN1-202ENST00000340882 ICAM4Q14773 271 aa11.23□□□□□ -0.61
NECTIN1-202ENST00000340882 TRIM16LQ309B1 348 aa11.23□□□□□ -0.61
NECTIN1-202ENST00000340882 IGFL4Q6B9Z1 124 aa11.23□□□□□ -0.61
NECTIN1-202ENST00000340882 OR8G2PQ6IF36 304 aa11.23□□□□□ -0.61
NECTIN1-202ENST00000340882 RXFP4Q8TDU9 374 aa11.23□□□□□ -0.61
NECTIN1-202ENST00000340882 PTTG2Q9NZH5 202 aa11.23□□□□□ -0.61
NECTIN1-202ENST00000340882 UCP1P25874 307 aa11.22□□□□□ -0.61
NECTIN1-202ENST00000340882 C1orf194Q5T5A4 169 aa11.22□□□□□ -0.61
NECTIN1-202ENST00000340882 CDPF1Q6NVV7 123 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms