RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 TRBV7-1A0A0A6YYK4 115 aa4.59□□□□□ -1.68
PTPRB-202ENST00000334414 IGKV3-11P04433 115 aa4.59□□□□□ -1.68
PTPRB-202ENST00000334414 MRAPQ8TCY5 172 aa4.59□□□□□ -1.68
PTPRB-202ENST00000334414 UBR3Q6ZT12 1888 aa4.59□□□□□ -1.68
PTPRB-202ENST00000334414 A0A087X0K7 114 aa4.59□□□□□ -1.68
PTPRB-202ENST00000334414 TRAV13-2A0A0B4J235 113 aa4.59□□□□□ -1.68
PTPRB-202ENST00000334414 Q86TA4 180 aa4.59□□□□□ -1.68
PTPRB-202ENST00000334414 NPC2P61916 151 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 SNHG12Q9BXW3 62 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 TRAV8-3A0A0A6YYJ7 113 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 PLAURQ03405 335 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 ERCC8Q13216 396 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 TRIP6Q15654 476 aaKnown RBP4.58□□□□□ -1.68
PTPRB-202ENST00000334414 Q71RC1 249 aaPredicted RBP4.58□□□□□ -1.68
PTPRB-202ENST00000334414 IGFBPL1Q8WX77 278 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 ARRDC1-AS1Q9H2J1 176 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 KIR2DL5BA0A0G2JN68 375 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 KIR2DL5BA0A0G2JPC4 375 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 CENPVL1A0A0U1RR11 272 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 GNG5P63218 68 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 KIR2DL5AQ8N109 375 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 WFDC1Q9HC57 220 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 TRGV2A0A075B6R0 118 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 IGHV2-70DA0A0C4DH43 119 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 COX6A1P12074 109 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 ZNF329Q86UD4 541 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 LDLRAD4O15165 306 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 APOBEC3AP31941 199 aaPredicted RBP4.58□□□□□ -1.68
PTPRB-202ENST00000334414 YPEL3P61236 119 aaPredicted RBP4.58□□□□□ -1.68
PTPRB-202ENST00000334414 COL9A2Q14055 689 aaPredicted RBP4.58□□□□□ -1.68
PTPRB-202ENST00000334414 BVES-AS1Q5T3Y7 98 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 GATD1Q8NB37 220 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 NDUFB8O95169 186 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 TRGV3P03979 118 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 ATP5EP56381 51 aaPredicted RBP4.58□□□□□ -1.68
PTPRB-202ENST00000334414 GTSCR1Q86UQ5 136 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 XIRP1Q702N8 1843 aaKnown RBP4.58□□□□□ -1.68
PTPRB-202ENST00000334414 KNCNA6PVL3 124 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 JMJD8Q96S16 334 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 TOMM7Q9P0U1 55 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 ANKRD29Q8N6D5 301 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 DCTN5Q9BTE1 182 aa4.58□□□□□ -1.68
PTPRB-202ENST00000334414 CCL8P80075 99 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 HGFACQ04756 655 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 TMEM52Q8NDY8 209 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 DSCR8Q96T75 97 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 TSSC4Q9Y5U2 329 aaPredicted RBP4.57□□□□□ -1.68
PTPRB-202ENST00000334414 IGHV2OR16-5A0A0B4J2B6 119 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 ZNF138P52744 262 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 NMSQ5H8A3 153 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 NABP1Q96AH0 204 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 AMN1Q8IY45 258 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 IGKV1D-33P01593 117 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 IGKV1-33P01594 117 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 KLRD1Q13241 179 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 FOXL2P58012 376 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 SUPT4H1P63272 117 aaKnown RBP4.57□□□□□ -1.68
PTPRB-202ENST00000334414 RPL36AP83881 106 aaKnown RBP4.57□□□□□ -1.68
PTPRB-202ENST00000334414 RPL36ALQ969Q0 106 aaKnown RBP4.57□□□□□ -1.68
PTPRB-202ENST00000334414 TMEM133Q9H2Q1 129 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 SHISA3A0PJX4 238 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 C18orf32Q8TCD1 76 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 SIGLEC8Q9NYZ4 499 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 CHCHD2Q9Y6H1 151 aaPredicted RBP4.57□□□□□ -1.68
PTPRB-202ENST00000334414 I3L3M4 83 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 RHODO00212 210 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 TMEM14CQ9P0S9 112 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 SH2D1AO60880 128 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 TCTEX1D4Q5JR98 221 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 LYZL1Q6UWQ5 148 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 MBNL3Q9NUK0 354 aaKnown RBP4.57□□□□□ -1.68
PTPRB-202ENST00000334414 IGKV3D-15A0A087WSY6 115 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 IGKV3-15P01624 115 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 HLA-DRB4P13762 266 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 KLF5Q13887 457 aaPredicted RBP4.57□□□□□ -1.68
PTPRB-202ENST00000334414 SS18Q15532 418 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 CCL19Q99731 98 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 HLA-DRB4X5D2U9 266 aa4.57□□□□□ -1.68
PTPRB-202ENST00000334414 IGKV3-7A0A075B6H7 116 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 INSP01308 110 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 PF4P02776 101 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 PFN1P07737 140 aaKnown RBP4.56□□□□□ -1.68
PTPRB-202ENST00000334414 CARD19Q96LW7 228 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 NRTNQ99748 197 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 SRXN1Q9BYN0 137 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 PRO1854Q9UHT4 67 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 KLK10O43240 276 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 LINC00158P58513 81 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 SIGLEC12Q96PQ1 595 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 LINC01587Q99440 93 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 C20orf78Q9BR46 151 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 TMEM158Q8WZ71 300 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 RFNGQ9Y644 331 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 PAX4O43316 350 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 ADCYAP1P18509 176 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 PEAR1Q5VY43 1037 aaPredicted RBP4.56□□□□□ -1.68
PTPRB-202ENST00000334414 STPG4Q8N801 248 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 IGHV3OR16-12A0A075B7B8 117 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 IGKV3D-11A0A0A0MRZ8 115 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms