RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 LYNX1P0DP58 116 aa17.32■□□□□ 0.36
RNF40-201ENST00000324685 NABP1Q96AH0 204 aa17.32■□□□□ 0.36
RNF40-201ENST00000324685 NEUROG3Q9Y4Z2 214 aa17.32■□□□□ 0.36
RNF40-201ENST00000324685 LRRC37AA6NMS7 1700 aa17.32■□□□□ 0.36
RNF40-201ENST00000324685 TRAV40A0A0B4J280 105 aa17.32■□□□□ 0.36
RNF40-201ENST00000324685 TCRAP04437 139 aa17.32■□□□□ 0.36
RNF40-201ENST00000324685 PSG1P11464 419 aa17.32■□□□□ 0.36
RNF40-201ENST00000324685 MINOS1Q5TGZ0 78 aa17.32■□□□□ 0.36
RNF40-201ENST00000324685 MINOS1-NBL1R4GNA1 71 aa17.32■□□□□ 0.36
RNF40-201ENST00000324685 SCN8AQ9UQD0 1980 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 TOMM40O96008 361 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 IGHV1-8P0DP01 117 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 CD33P20138 364 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 CSRP1P21291 193 aaKnown RBP17.31■□□□□ 0.36
RNF40-201ENST00000324685 SRSF4Q08170 494 aaKnown RBP17.31■□□□□ 0.36
RNF40-201ENST00000324685 LINC01551Q86U37 167 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 TPTE2P1Q5T6R2 138 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 LYZL1Q6UWQ5 148 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 CST9LQ9H4G1 147 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 IL18BPO95998 194 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 LGALS1P09382 135 aaKnown RBP17.31■□□□□ 0.36
RNF40-201ENST00000324685 GAS1P54826 345 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 FOXF2Q12947 444 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 C1orf194Q5T5A4 169 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 VMO1Q7Z5L0 202 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 ZCCHC24Q8N2G6 241 aaKnown RBP17.31■□□□□ 0.36
RNF40-201ENST00000324685 RPRMLQ8N4K4 120 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 RASL10AQ92737 203 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 C15orf32Q32M92 178 aa17.31■□□□□ 0.36
RNF40-201ENST00000324685 IGHV1-3A0A0C4DH29 117 aa17.3■□□□□ 0.36
RNF40-201ENST00000324685 TMEM200BQ69YZ2 307 aa17.3■□□□□ 0.36
RNF40-201ENST00000324685 SCRT1Q9BWW7 348 aa17.3■□□□□ 0.36
RNF40-201ENST00000324685 C9orf139Q6ZV77 190 aa17.3■□□□□ 0.36
RNF40-201ENST00000324685 PLSCR4Q9NRQ2 329 aa17.3■□□□□ 0.36
RNF40-201ENST00000324685 ZNF138P52744 262 aa17.3■□□□□ 0.36
RNF40-201ENST00000324685 TMEM14EPQ6UXP3 125 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 DPH3P1Q9H4G8 78 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 NCR2O95944 276 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 SRD5A1P18405 259 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 SUPT4H1P63272 117 aaKnown RBP17.29■□□□□ 0.36
RNF40-201ENST00000324685 ZNF415Q09FC8 603 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 TEX43Q6ZNM6 134 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 EXOC3-AS1Q8N2X6 119 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 OVOL2Q9BRP0 275 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 UNC13CQ8NB66 2214 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 RPL15P61313 204 aaKnown RBP17.29■□□□□ 0.36
RNF40-201ENST00000324685 NMSQ5H8A3 153 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 GGNQ86UU5 652 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 JPT2Q9H910 190 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 TRBV7-1A0A0A6YYK4 115 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 ZNF672Q499Z4 452 aaPredicted RBP17.29■□□□□ 0.36
RNF40-201ENST00000324685 Q5PR19 223 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 CRIM1Q9NZV1 1036 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 A0A0U1RRA0 63 aa17.29■□□□□ 0.36
RNF40-201ENST00000324685 PATJQ8NI35 1801 aa17.28■□□□□ 0.36
RNF40-201ENST00000324685 LTBRP36941 435 aa17.28■□□□□ 0.36
RNF40-201ENST00000324685 ZFAND6Q6FIF0 208 aa17.28■□□□□ 0.36
RNF40-201ENST00000324685 WFDC12Q8WWY7 111 aa17.28■□□□□ 0.36
RNF40-201ENST00000324685 OTOFQ9HC10 1997 aa17.28■□□□□ 0.36
RNF40-201ENST00000324685 MTCL1Q9Y4B5 1905 aaKnown RBP17.28■□□□□ 0.36
RNF40-201ENST00000324685 BCL6BQ8N143 479 aaPredicted RBP17.28■□□□□ 0.36
RNF40-201ENST00000324685 IGKV1-27A0A075B6S5 117 aa17.28■□□□□ 0.36
RNF40-201ENST00000324685 SH2D1AO60880 128 aa17.28■□□□□ 0.36
RNF40-201ENST00000324685 RPL36AP83881 106 aaKnown RBP17.28■□□□□ 0.36
RNF40-201ENST00000324685 GAGE2BQ13066 116 aa17.28■□□□□ 0.36
RNF40-201ENST00000324685 GAGE2EQ4V326 116 aa17.28■□□□□ 0.36
RNF40-201ENST00000324685 RPL36ALQ969Q0 106 aaKnown RBP17.28■□□□□ 0.36
RNF40-201ENST00000324685 GAGE2DQ9UEU5 116 aa17.28■□□□□ 0.36
RNF40-201ENST00000324685 A6NNC1 897 aa17.28■□□□□ 0.36
RNF40-201ENST00000324685 ZNF876PQ49A33 203 aa17.28■□□□□ 0.36
RNF40-201ENST00000324685 GATD1Q8NB37 220 aa17.28■□□□□ 0.36
RNF40-201ENST00000324685 LINC00477Q96M19 166 aa17.28■□□□□ 0.36
RNF40-201ENST00000324685 TRBV6-6A0A0A6YYG2 114 aa17.27■□□□□ 0.36
RNF40-201ENST00000324685 KLF17Q5JT82 389 aaPredicted RBP17.27■□□□□ 0.36
RNF40-201ENST00000324685 PTPRZ1P23471 2315 aaPredicted RBP17.27■□□□□ 0.36
RNF40-201ENST00000324685 VCYO14598 125 aa17.27■□□□□ 0.36
RNF40-201ENST00000324685 PSG3Q16557 428 aa17.27■□□□□ 0.36
RNF40-201ENST00000324685 C3orf36Q3SXR2 165 aa17.27■□□□□ 0.36
RNF40-201ENST00000324685 C10orf55Q5SWW7 151 aa17.27■□□□□ 0.36
RNF40-201ENST00000324685 NTN3O00634 580 aaPredicted RBP17.27■□□□□ 0.35
RNF40-201ENST00000324685 NSUN5P1Q3KNT7 163 aa17.27■□□□□ 0.35
RNF40-201ENST00000324685 LYPD1Q8N2G4 141 aa17.27■□□□□ 0.35
RNF40-201ENST00000324685 GUSBP1Q15486 140 aa17.27■□□□□ 0.35
RNF40-201ENST00000324685 TMEM155Q4W5P6 130 aa17.27■□□□□ 0.35
RNF40-201ENST00000324685 FAM90A2PQ658T7 463 aa17.27■□□□□ 0.35
RNF40-201ENST00000324685 MRPL27Q9P0M9 148 aaKnown RBP17.27■□□□□ 0.35
RNF40-201ENST00000324685 IGKV1-5P01602 117 aa17.26■□□□□ 0.35
RNF40-201ENST00000324685 LHFPL4Q7Z7J7 247 aa17.26■□□□□ 0.35
RNF40-201ENST00000324685 MRPL52Q86TS9 123 aaKnown RBP17.26■□□□□ 0.35
RNF40-201ENST00000324685 CD177Q8N6Q3 437 aa17.26■□□□□ 0.35
RNF40-201ENST00000324685 TMEM178BH3BS89 294 aa17.26■□□□□ 0.35
RNF40-201ENST00000324685 EFNA4P52798 201 aa17.26■□□□□ 0.35
RNF40-201ENST00000324685 ARID2Q68CP9 1835 aa17.26■□□□□ 0.35
RNF40-201ENST00000324685 TMEM105Q8N8V8 129 aa17.25■□□□□ 0.35
RNF40-201ENST00000324685 NRXN2Q9P2S2 1712 aa17.25■□□□□ 0.35
RNF40-201ENST00000324685 A0A087WX48 190 aa17.25■□□□□ 0.35
RNF40-201ENST00000324685 NUP35Q8NFH5 326 aa17.25■□□□□ 0.35
RNF40-201ENST00000324685 H0YJW9 148 aa17.25■□□□□ 0.35
RNF40-201ENST00000324685 EFNA2O43921 213 aa17.25■□□□□ 0.35
RNF40-201ENST00000324685 RPP25LQ8N5L8 163 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms