RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ZCCHC24Q8N2G6 241 aaKnown RBP10.39□□□□□ -0.75
DNMT3A-202ENST00000321117 STPG4Q8N801 248 aa10.39□□□□□ -0.75
DNMT3A-202ENST00000321117 M0QZ24 198 aa10.39□□□□□ -0.75
DNMT3A-202ENST00000321117 SLC25A48Q6ZT89 311 aaKnown RBP10.39□□□□□ -0.75
DNMT3A-202ENST00000321117 COX11Q9Y6N1 276 aa10.39□□□□□ -0.75
DNMT3A-202ENST00000321117 hDV102S1A0JD36 115 aa10.39□□□□□ -0.75
DNMT3A-202ENST00000321117 CD3EP07766 207 aa10.39□□□□□ -0.75
DNMT3A-202ENST00000321117 GPR183P32249 361 aa10.39□□□□□ -0.75
DNMT3A-202ENST00000321117 LDLRAD2Q5SZI1 272 aa10.39□□□□□ -0.75
DNMT3A-202ENST00000321117 MUC15Q8N387 334 aa10.39□□□□□ -0.75
DNMT3A-202ENST00000321117 SMIM27A0A1W2PRY6 76 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 MMP23AO75900 390 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 IL4P05112 153 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 FTH1P19P0C7X4 201 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 TDGF1P13385 188 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 ZNF329Q86UD4 541 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 FBXL15Q9H469 300 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 OTORQ9NRC9 128 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 ZNRD1Q9P1U0 126 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 TMEM167AQ8TBQ9 72 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 NBASA2RRP1 2371 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 OR2J3O76001 311 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 CD59P13987 128 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 LOXL3P58215 753 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 ZNF841Q6ZN19 808 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 SPACA3Q8IXA5 215 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 C17orf100A8MU93 164 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 SYS1-DBNDD2H3BUS1 97 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 IGHG3P01860 377 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 TEX45Q8NA69 505 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 GAFA1Q96PS6 74 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 COLQQ9Y215 455 aaPredicted RBP10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 C5orf42Q9H799 3197 aa10.38□□□□□ -0.75
DNMT3A-202ENST00000321117 C17orf58Q2M2W7 97 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 TMEM116Q8NCL8 245 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 UFC1Q9Y3C8 167 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 PCNX2A6NKB5 2137 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 A1L4Q6 167 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 PRELID3AQ96N28 172 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 AKAP6Q13023 2319 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 BRCA2P51587 3418 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 CHD7Q9P2D1 2997 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 H0YJW9 148 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 TCRAP04437 139 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 CLEC3BP05452 202 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 FRMD6-AS1P0C7T7 363 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 BMI1P35226 326 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 ASPHD1Q5U4P2 390 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 ZNF414Q96IQ9 312 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 HILPDAQ9Y5L2 63 aa10.37□□□□□ -0.75
DNMT3A-202ENST00000321117 GCSHP23434 173 aa10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 BRWD1-AS2P59051 145 aa10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 RPL11P62913 178 aaKnown RBP10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 HIST1H1AQ02539 215 aaPredicted RBP10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 F11RQ9Y624 299 aaKnown RBP10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 COL5A1P20908 1838 aaPredicted RBP10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 FBLL1A6NHQ2 334 aaKnown RBP10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 SH2D7A6NKC9 451 aaPredicted RBP10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 FABP2P12104 132 aa10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 ZNF788Q6ZQV5 615 aa10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 FAM231DQ6ZW35 169 aa10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 IGLL1P15814 213 aa10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 S100A4P26447 101 aaKnown RBP10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 RELQ04864 619 aaPredicted RBP10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 Q6AWC8 147 aa10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 A0A1B0GW15 77 aa10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 ZNF138P52744 262 aa10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 MUC21Q5SSG8 566 aa10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 AMMECR1LQ6DCA0 310 aa10.36□□□□□ -0.75
DNMT3A-202ENST00000321117 TRAV8-1A0A0A6YYK1 113 aa10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 DUX4L9Q6RFH8 374 aaPredicted RBP10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 CIARTQ8N365 385 aaPredicted RBP10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 C8orf46Q8TAG6 207 aa10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 TMUB1Q9BVT8 246 aa10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 SLC25A2Q9BXI2 301 aa10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 MS4A6AQ9H2W1 248 aa10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 ESDP10768 282 aa10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 CFHR2P36980 270 aa10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 PLP1P60201 277 aa10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 Q8TCH9 128 aa10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 FAM168AQ92567 244 aa10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 MAP1LC3AQ9H492 121 aa10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 MFAP4P55083 255 aa10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 POU2AF1Q16633 256 aa10.35□□□□□ -0.75
DNMT3A-202ENST00000321117 TRAV30A0A087WSZ9 112 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 ATRXP46100 2492 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 MAJINQ3KP22 176 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 OR5AN1Q8NGI8 311 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 MCRIP2Q9BUT9 160 aaKnown RBP10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 RALYQ9UKM9 306 aaKnown RBP10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 PPIAL4CA0A0B4J2A2 164 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 PPIAL4GP0DN37 164 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 RPS20P60866 119 aaKnown RBP10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 PPP1R27Q86WC6 154 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 ORMDL3Q8N138 153 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 EXOC3-AS1Q8N2X6 119 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 TRGV9Q99603 122 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 NDUFA4L2Q9NRX3 87 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms