RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 MYOD1P15172 320 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 KIR2DS2P43631 304 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 C1orf61Q13536 156 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 Q6Q795 121 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 OR1L8Q8NGR8 309 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 RASL10AQ92737 203 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 TRIB1Q96RU8 372 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 NUDT22Q9BRQ3 303 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 DLL3Q9NYJ7 618 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 SLC25A10Q9UBX3 287 aaPredicted RBP5.4□□□□□ -1.55
ZNF540-201ENST00000316433 SNCGO76070 127 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 ZNF688P0C7X2 276 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 ZNF32P17041 273 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 SMCPP49901 116 aaPredicted RBP5.39□□□□□ -1.55
ZNF540-201ENST00000316433 ZNF474Q6S9Z5 364 aaPredicted RBP5.39□□□□□ -1.55
ZNF540-201ENST00000316433 MDFICQ9P1T7 246 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 A8MWL6 223 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 CELA2AP08217 269 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 FOXA3P55318 350 aaPredicted RBP5.39□□□□□ -1.55
ZNF540-201ENST00000316433 PCP2Q8IVA1 136 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 LRRC75A-AS1Q8N1F1 130 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 CARD19Q96LW7 228 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 HIGD1BQ9P298 99 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 TRAV24A0A0B4J272 114 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 TCRBV4S1A1TA0A5B7 111 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 IQCF6A8MYZ5 107 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 J3KT08 172 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 IGKV1-5P01602 117 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 FAM106CPP0CH98 169 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 GATA4P43694 442 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 NMUP48645 174 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 CAMPP49913 170 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 PRSS12P56730 875 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 EDDM3BP56851 147 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 FAM106AQ4KMX7 169 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 NUP35Q8NFH5 326 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 OR13C6PQ8NH95 151 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 LINC01587Q99440 93 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 ZNF747Q9BV97 191 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 SSBP3Q9BWW4 388 aaPredicted RBP5.39□□□□□ -1.55
ZNF540-201ENST00000316433 MRPL32Q9BYC8 188 aaKnown RBP5.39□□□□□ -1.55
ZNF540-201ENST00000316433 WDR83OSQ9Y284 106 aa5.39□□□□□ -1.55
ZNF540-201ENST00000316433 TIMM8BQ9Y5J9 83 aaPredicted RBP5.39□□□□□ -1.55
ZNF540-201ENST00000316433 GCHFRP30047 84 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 PLGLB1Q02325 96 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 PIGYQ3MUY2 71 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 Q6ZR03 302 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 OR51H1Q8NH63 302 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 TRAV4A0A0B4J268 109 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 H3BML4 177 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 C16orf97H3BN30 126 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 MPV17P39210 176 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 UCNP55089 124 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 RRN3P1Q2M238 152 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 DEFB133Q30KQ1 61 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 PVRIGQ6DKI7 326 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 ATP5L2Q7Z4Y8 100 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 PPP1R27Q86WC6 154 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 TEN1Q86WV5 123 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 C3orf56Q8N813 242 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 FAM168AQ92567 244 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 CHAC1Q9BUX1 264 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 DEPPQ9NTK1 212 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 IDI2-AS1Q9NZ38 188 aa5.38□□□□□ -1.55
ZNF540-201ENST00000316433 A0A1W2PNR3 127 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 C9JAW5 83 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 C15orf65H3BRN8 121 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 PRRG2O14669 202 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 TNFRSF6BO95407 300 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 IGLV2-8P01709 118 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 COL8A1P27658 744 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 AAED1Q7RTV5 226 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 CEND1Q8N111 149 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 MRAPQ8TCY5 172 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 LINC00479Q96M42 142 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 RASL11BQ9BPW5 248 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 FBXL15Q9H469 300 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 HIGD1AQ9Y241 93 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 A0A1B0GXF2 115 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 NPIPB6E9PJ23 425 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 KLK10O43240 276 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 LY6DQ14210 128 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 MRPL23Q16540 153 aaKnown RBP5.37□□□□□ -1.55
ZNF540-201ENST00000316433 KIR2DL5BQ8NHK3 375 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 LSM4Q9Y4Z0 139 aaKnown RBP5.37□□□□□ -1.55
ZNF540-201ENST00000316433 SPRY1O43609 319 aaPredicted RBP5.37□□□□□ -1.55
ZNF540-201ENST00000316433 IGHG3P01860 377 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 CCL3P10147 92 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 ACP1P24666 158 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 C12orf74Q32Q52 190 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 LGALS9BQ3B8N2 356 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 LGALS9CQ6DKI2 356 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 TREML4Q6UXN2 200 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 OR10J6PQ8NGY7 276 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 ZDHHC16Q969W1 377 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 TMEM101Q96IK0 257 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 SGK494Q96LW2 274 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 ZNF442Q9H7R0 627 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 IL36RNQ9UBH0 155 aa5.37□□□□□ -1.55
ZNF540-201ENST00000316433 KLF12Q9Y4X4 402 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms