RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 CLINT1Q14677 625 aa18.59■□□□□ 0.57
HOXC9-201ENST00000303450 ZNF546Q86UE3 836 aa18.59■□□□□ 0.57
HOXC9-201ENST00000303450 DYNLRB2Q8TF09 96 aa18.59■□□□□ 0.57
HOXC9-201ENST00000303450 UBE2L5PA0A1B0GUS4 154 aa18.58■□□□□ 0.56
HOXC9-201ENST00000303450 SMLR1H3BR10 107 aa18.58■□□□□ 0.56
HOXC9-201ENST00000303450 ADAMTSL5Q6ZMM2 481 aa18.58■□□□□ 0.56
HOXC9-201ENST00000303450 CYP2G1PQ6ZSU1 146 aa18.58■□□□□ 0.56
HOXC9-201ENST00000303450 INO80EQ8NBZ0 244 aaPredicted RBP18.58■□□□□ 0.56
HOXC9-201ENST00000303450 LSM4Q9Y4Z0 139 aaKnown RBP18.58■□□□□ 0.56
HOXC9-201ENST00000303450 G3V3Q6 166 aa18.57■□□□□ 0.56
HOXC9-201ENST00000303450 WIPF1O43516 503 aa18.57■□□□□ 0.56
HOXC9-201ENST00000303450 RAB31Q13636 194 aa18.57■□□□□ 0.56
HOXC9-201ENST00000303450 BPIFCQ8NFQ6 507 aa18.57■□□□□ 0.56
HOXC9-201ENST00000303450 METTL26Q96S19 204 aa18.57■□□□□ 0.56
HOXC9-201ENST00000303450 CFDP00746 253 aaPredicted RBP18.56■□□□□ 0.56
HOXC9-201ENST00000303450 C8orf88P0DMB2 117 aa18.56■□□□□ 0.56
HOXC9-201ENST00000303450 NPPCP23582 126 aa18.56■□□□□ 0.56
HOXC9-201ENST00000303450 SELENOTP62341 195 aa18.56■□□□□ 0.56
HOXC9-201ENST00000303450 RNF125Q96EQ8 232 aa18.56■□□□□ 0.56
HOXC9-201ENST00000303450 AQP10Q96PS8 301 aa18.56■□□□□ 0.56
HOXC9-201ENST00000303450 PBDC1Q9BVG4 233 aa18.56■□□□□ 0.56
HOXC9-201ENST00000303450 WDR83OSQ9Y284 106 aa18.56■□□□□ 0.56
HOXC9-201ENST00000303450 IGHV7-4-1A0A0J9YVY3 117 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 A0A1B0GVG6 124 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 IGLV1-51P01701 117 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 GATA2P23769 480 aaPredicted RBP18.55■□□□□ 0.56
HOXC9-201ENST00000303450 LYZP61626 148 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 BTNL8Q6UX41 500 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 ATP5SQ99766 215 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 SMIM3Q9BZL3 60 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 TECRQ9NZ01 308 aaKnown RBP18.55■□□□□ 0.56
HOXC9-201ENST00000303450 SMPXQ9UHP9 88 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 IGHV3-49A0A0A0MS15 119 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 WI2-2373I1.2A0A1W2PRP0 233 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 AGPAT2O15120 278 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 USF2Q15853 346 aaPredicted RBP18.54■□□□□ 0.56
HOXC9-201ENST00000303450 TMEM182Q6ZP80 229 aaPredicted RBP18.54■□□□□ 0.56
HOXC9-201ENST00000303450 MGST2Q99735 147 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 TNFSF18Q9UNG2 199 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 DFFBO76075 338 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 FGF7P21781 194 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 CAMLGP49069 296 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 NARS2Q96I59 477 aaKnown RBP18.54■□□□□ 0.56
HOXC9-201ENST00000303450 ST6GAL2Q96JF0 529 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 RHPN1-AS1Q9BWJ2 59 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 MLXQ9UH92 298 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 RABAC1Q9UI14 185 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 NOTCH1P46531 2555 aa18.53■□□□□ 0.56
HOXC9-201ENST00000303450 IGHV3OR16-13A0A075B7E8 117 aa18.53■□□□□ 0.56
HOXC9-201ENST00000303450 IGHV3-74A0A0B4J1X5 117 aa18.53■□□□□ 0.56
HOXC9-201ENST00000303450 CRYBB3P26998 211 aa18.53■□□□□ 0.56
HOXC9-201ENST00000303450 BMI1P35226 326 aa18.53■□□□□ 0.56
HOXC9-201ENST00000303450 DEFB114Q30KQ6 69 aa18.53■□□□□ 0.56
HOXC9-201ENST00000303450 ZMAT5Q9UDW3 170 aaKnown RBP18.53■□□□□ 0.56
HOXC9-201ENST00000303450 SELENOKQ9Y6D0 94 aa18.53■□□□□ 0.56
HOXC9-201ENST00000303450 NBEAL1Q6ZS30 2694 aa18.52■□□□□ 0.56
HOXC9-201ENST00000303450 MPDU1O75352 247 aa18.52■□□□□ 0.56
HOXC9-201ENST00000303450 HNRNPCP07910 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
HOXC9-201ENST00000303450 SLC45A2Q9UMX9 530 aa18.52■□□□□ 0.56
HOXC9-201ENST00000303450 A0A1W2PS18 150 aa18.51■□□□□ 0.55
HOXC9-201ENST00000303450 CHEK1O14757 476 aa18.51■□□□□ 0.55
HOXC9-201ENST00000303450 ARPC5O15511 151 aa18.51■□□□□ 0.55
HOXC9-201ENST00000303450 APOHP02749 345 aaPredicted RBP18.51■□□□□ 0.55
HOXC9-201ENST00000303450 LINC00869P0C866 280 aa18.51■□□□□ 0.55
HOXC9-201ENST00000303450 AP2S1P53680 142 aaPredicted RBP18.51■□□□□ 0.55
HOXC9-201ENST00000303450 BEAN1Q3B7T3 259 aa18.51■□□□□ 0.55
HOXC9-201ENST00000303450 CD300EQ496F6 205 aaPredicted RBP18.51■□□□□ 0.55
HOXC9-201ENST00000303450 AKAP14Q86UN6 197 aa18.51■□□□□ 0.55
HOXC9-201ENST00000303450 FBXL17Q9UF56 701 aa18.51■□□□□ 0.55
HOXC9-201ENST00000303450 RNF222A6NCQ9 220 aa18.5■□□□□ 0.55
HOXC9-201ENST00000303450 IFNA5P01569 189 aa18.5■□□□□ 0.55
HOXC9-201ENST00000303450 ORM2P19652 201 aa18.5■□□□□ 0.55
HOXC9-201ENST00000303450 EGFEM1PQ0D2K5 195 aa18.5■□□□□ 0.55
HOXC9-201ENST00000303450 OR2K2Q8NGT1 345 aa18.5■□□□□ 0.55
HOXC9-201ENST00000303450 TMEM231Q9H6L2 316 aa18.5■□□□□ 0.55
HOXC9-201ENST00000303450 PFDN2Q9UHV9 154 aa18.5■□□□□ 0.55
HOXC9-201ENST00000303450 IGHV3-66A0A0C4DH42 116 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 EIF2B2P49770 351 aaKnown RBP18.49■□□□□ 0.55
HOXC9-201ENST00000303450 KPRPQ5T749 579 aaPredicted RBP18.49■□□□□ 0.55
HOXC9-201ENST00000303450 LCN12Q6JVE5 192 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 TCTE3Q8IZS6 198 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 OR1B1Q8NGR6 318 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 ST8SIA2Q92186 375 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 GGTLC1Q9BX51 225 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 WDR61Q9GZS3 305 aaKnown RBP18.49■□□□□ 0.55
HOXC9-201ENST00000303450 VSIRQ9H7M9 311 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 WFDC1Q9HC57 220 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 SORL1Q92673 2214 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 SCGB1C1Q8TD33 95 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 PPP1R14BQ96C90 147 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 GRAMD2BQ96HH9 432 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 RNF2Q99496 336 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 NPCDR1Q9BY65 106 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 KRTAP10-11P60412 298 aa18.48■□□□□ 0.55
HOXC9-201ENST00000303450 MIC13Q5XKP0 118 aa18.48■□□□□ 0.55
HOXC9-201ENST00000303450 LAMTOR1Q6IAA8 161 aa18.48■□□□□ 0.55
HOXC9-201ENST00000303450 RBPMS2Q6ZRY4 209 aaKnown RBP18.48■□□□□ 0.55
HOXC9-201ENST00000303450 ZNF709Q8N972 641 aa18.48■□□□□ 0.55
HOXC9-201ENST00000303450 OR11H4Q8NGC9 324 aa18.48■□□□□ 0.55
HOXC9-201ENST00000303450 MFFQ9GZY8 342 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms