RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 CLINT1Q14677 625 aa18.59■□□□□ 0.57
HOXC9-201ENST00000303450 ZNF546Q86UE3 836 aa18.59■□□□□ 0.57
HOXC9-201ENST00000303450 DYNLRB2Q8TF09 96 aa18.59■□□□□ 0.57
HOXC9-201ENST00000303450 UBE2L5PA0A1B0GUS4 154 aa18.58■□□□□ 0.56
HOXC9-201ENST00000303450 SMLR1H3BR10 107 aa18.58■□□□□ 0.56
HOXC9-201ENST00000303450 ADAMTSL5Q6ZMM2 481 aa18.58■□□□□ 0.56
HOXC9-201ENST00000303450 CYP2G1PQ6ZSU1 146 aa18.58■□□□□ 0.56
HOXC9-201ENST00000303450 INO80EQ8NBZ0 244 aaPredicted RBP18.58■□□□□ 0.56
HOXC9-201ENST00000303450 LSM4Q9Y4Z0 139 aaKnown RBP18.58■□□□□ 0.56
HOXC9-201ENST00000303450 G3V3Q6 166 aa18.57■□□□□ 0.56
HOXC9-201ENST00000303450 WIPF1O43516 503 aa18.57■□□□□ 0.56
HOXC9-201ENST00000303450 RAB31Q13636 194 aa18.57■□□□□ 0.56
HOXC9-201ENST00000303450 BPIFCQ8NFQ6 507 aa18.57■□□□□ 0.56
HOXC9-201ENST00000303450 METTL26Q96S19 204 aa18.57■□□□□ 0.56
HOXC9-201ENST00000303450 CFDP00746 253 aaPredicted RBP18.56■□□□□ 0.56
HOXC9-201ENST00000303450 C8orf88P0DMB2 117 aa18.56■□□□□ 0.56
HOXC9-201ENST00000303450 NPPCP23582 126 aa18.56■□□□□ 0.56
HOXC9-201ENST00000303450 SELENOTP62341 195 aa18.56■□□□□ 0.56
HOXC9-201ENST00000303450 RNF125Q96EQ8 232 aa18.56■□□□□ 0.56
HOXC9-201ENST00000303450 AQP10Q96PS8 301 aa18.56■□□□□ 0.56
HOXC9-201ENST00000303450 PBDC1Q9BVG4 233 aa18.56■□□□□ 0.56
HOXC9-201ENST00000303450 WDR83OSQ9Y284 106 aa18.56■□□□□ 0.56
HOXC9-201ENST00000303450 IGHV7-4-1A0A0J9YVY3 117 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 A0A1B0GVG6 124 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 IGLV1-51P01701 117 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 GATA2P23769 480 aaPredicted RBP18.55■□□□□ 0.56
HOXC9-201ENST00000303450 LYZP61626 148 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 BTNL8Q6UX41 500 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 ATP5SQ99766 215 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 SMIM3Q9BZL3 60 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 TECRQ9NZ01 308 aaKnown RBP18.55■□□□□ 0.56
HOXC9-201ENST00000303450 SMPXQ9UHP9 88 aa18.55■□□□□ 0.56
HOXC9-201ENST00000303450 IGHV3-49A0A0A0MS15 119 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 WI2-2373I1.2A0A1W2PRP0 233 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 AGPAT2O15120 278 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 USF2Q15853 346 aaPredicted RBP18.54■□□□□ 0.56
HOXC9-201ENST00000303450 TMEM182Q6ZP80 229 aaPredicted RBP18.54■□□□□ 0.56
HOXC9-201ENST00000303450 MGST2Q99735 147 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 TNFSF18Q9UNG2 199 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 DFFBO76075 338 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 FGF7P21781 194 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 CAMLGP49069 296 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 NARS2Q96I59 477 aaKnown RBP18.54■□□□□ 0.56
HOXC9-201ENST00000303450 ST6GAL2Q96JF0 529 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 RHPN1-AS1Q9BWJ2 59 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 MLXQ9UH92 298 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 RABAC1Q9UI14 185 aa18.54■□□□□ 0.56
HOXC9-201ENST00000303450 NOTCH1P46531 2555 aa18.53■□□□□ 0.56
HOXC9-201ENST00000303450 IGHV3OR16-13A0A075B7E8 117 aa18.53■□□□□ 0.56
HOXC9-201ENST00000303450 IGHV3-74A0A0B4J1X5 117 aa18.53■□□□□ 0.56
HOXC9-201ENST00000303450 CRYBB3P26998 211 aa18.53■□□□□ 0.56
HOXC9-201ENST00000303450 BMI1P35226 326 aa18.53■□□□□ 0.56
HOXC9-201ENST00000303450 DEFB114Q30KQ6 69 aa18.53■□□□□ 0.56
HOXC9-201ENST00000303450 ZMAT5Q9UDW3 170 aaKnown RBP18.53■□□□□ 0.56
HOXC9-201ENST00000303450 SELENOKQ9Y6D0 94 aa18.53■□□□□ 0.56
HOXC9-201ENST00000303450 NBEAL1Q6ZS30 2694 aa18.52■□□□□ 0.56
HOXC9-201ENST00000303450 MPDU1O75352 247 aa18.52■□□□□ 0.56
HOXC9-201ENST00000303450 HNRNPCP07910 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
HOXC9-201ENST00000303450 SLC45A2Q9UMX9 530 aa18.52■□□□□ 0.56
HOXC9-201ENST00000303450 A0A1W2PS18 150 aa18.51■□□□□ 0.55
HOXC9-201ENST00000303450 CHEK1O14757 476 aa18.51■□□□□ 0.55
HOXC9-201ENST00000303450 ARPC5O15511 151 aa18.51■□□□□ 0.55
HOXC9-201ENST00000303450 APOHP02749 345 aaPredicted RBP18.51■□□□□ 0.55
HOXC9-201ENST00000303450 LINC00869P0C866 280 aa18.51■□□□□ 0.55
HOXC9-201ENST00000303450 AP2S1P53680 142 aaPredicted RBP18.51■□□□□ 0.55
HOXC9-201ENST00000303450 BEAN1Q3B7T3 259 aa18.51■□□□□ 0.55
HOXC9-201ENST00000303450 CD300EQ496F6 205 aaPredicted RBP18.51■□□□□ 0.55
HOXC9-201ENST00000303450 AKAP14Q86UN6 197 aa18.51■□□□□ 0.55
HOXC9-201ENST00000303450 FBXL17Q9UF56 701 aa18.51■□□□□ 0.55
HOXC9-201ENST00000303450 RNF222A6NCQ9 220 aa18.5■□□□□ 0.55
HOXC9-201ENST00000303450 IFNA5P01569 189 aa18.5■□□□□ 0.55
HOXC9-201ENST00000303450 ORM2P19652 201 aa18.5■□□□□ 0.55
HOXC9-201ENST00000303450 EGFEM1PQ0D2K5 195 aa18.5■□□□□ 0.55
HOXC9-201ENST00000303450 OR2K2Q8NGT1 345 aa18.5■□□□□ 0.55
HOXC9-201ENST00000303450 TMEM231Q9H6L2 316 aa18.5■□□□□ 0.55
HOXC9-201ENST00000303450 PFDN2Q9UHV9 154 aa18.5■□□□□ 0.55
HOXC9-201ENST00000303450 IGHV3-66A0A0C4DH42 116 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 EIF2B2P49770 351 aaKnown RBP18.49■□□□□ 0.55
HOXC9-201ENST00000303450 KPRPQ5T749 579 aaPredicted RBP18.49■□□□□ 0.55
HOXC9-201ENST00000303450 LCN12Q6JVE5 192 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 TCTE3Q8IZS6 198 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 OR1B1Q8NGR6 318 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 ST8SIA2Q92186 375 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 GGTLC1Q9BX51 225 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 WDR61Q9GZS3 305 aaKnown RBP18.49■□□□□ 0.55
HOXC9-201ENST00000303450 VSIRQ9H7M9 311 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 WFDC1Q9HC57 220 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 SORL1Q92673 2214 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 SCGB1C1Q8TD33 95 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 PPP1R14BQ96C90 147 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 GRAMD2BQ96HH9 432 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 RNF2Q99496 336 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 NPCDR1Q9BY65 106 aa18.49■□□□□ 0.55
HOXC9-201ENST00000303450 KRTAP10-11P60412 298 aa18.48■□□□□ 0.55
HOXC9-201ENST00000303450 MIC13Q5XKP0 118 aa18.48■□□□□ 0.55
HOXC9-201ENST00000303450 LAMTOR1Q6IAA8 161 aa18.48■□□□□ 0.55
HOXC9-201ENST00000303450 RBPMS2Q6ZRY4 209 aaKnown RBP18.48■□□□□ 0.55
HOXC9-201ENST00000303450 ZNF709Q8N972 641 aa18.48■□□□□ 0.55
HOXC9-201ENST00000303450 OR11H4Q8NGC9 324 aa18.48■□□□□ 0.55
HOXC9-201ENST00000303450 MFFQ9GZY8 342 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms