RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 C1orf122Q6ZSJ8 110 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 C9orf139Q6ZV77 190 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 LHFPL4Q7Z7J7 247 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 RHPN1-AS1Q9BWJ2 59 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 PRDM13Q9H4Q3 707 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 NYNRINQ9P2P1 1898 aaKnown RBP5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 DOCK4Q8N1I0 1966 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 IZUMO1RA6ND01 250 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 CBLN1P23435 193 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 CXorf65A6NEN9 183 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 PKIAP61925 76 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 KLF17Q5JT82 389 aaPredicted RBP5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 TRAF4Q9BUZ4 470 aaPredicted RBP5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 NRN1Q9NPD7 142 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 PSG1P11464 419 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 DAD1P61803 113 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 GFI1BQ5VTD9 330 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 IFT22Q9H7X7 185 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 CYSLTR1Q9Y271 337 aa5.67□□□□□ -1.5
GAPVD1-202ENST00000297933 SCN8AQ9UQD0 1980 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 TPRP12270 2363 aaKnown RBP5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 IGKV1-12A0A0C4DH73 117 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 F2Z2F3 143 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 CDK2AP2O75956 126 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 IGKV1D-12P01611 117 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 CD55P08174 381 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 PHLDA1Q8WV24 401 aaPredicted RBP5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 DAZ1Q9NQZ3 744 aaKnown RBP5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 MGAMO43451 1857 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 SRRM4A7MD48 611 aaKnown RBP5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 HIGD1CA8MV81 97 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 S100A7L2Q5SY68 101 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 FAM89BQ8N5H3 189 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 TMEM86BQ8N661 226 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 SLC25A39Q9BZJ4 359 aaPredicted RBP5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 SIGLEC9Q9Y336 463 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 ASXL3Q9C0F0 2248 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 IGKV1D-17A0A075B6S4 117 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 F5H768 121 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 MRAPQ8TCY5 172 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 LOC102724200A0A096LPH7 203 aaPredicted RBP5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 GAGE10A6NGK3 116 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 PMS2P5A8MQ11 134 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 OVOL3O00110 214 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 PRB4P10163 310 aaPredicted RBP5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 DEFB131AP59861 70 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 HGFACQ04756 655 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 LINC00477Q96M19 166 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 FBLN5Q9UBX5 448 aa5.66□□□□□ -1.5
GAPVD1-202ENST00000297933 LY6G6EA0A0G2JKS1 128 aa5.65□□□□□ -1.5
GAPVD1-202ENST00000297933 LINC00158P58513 81 aa5.65□□□□□ -1.5
GAPVD1-202ENST00000297933 U3KQA8 63 aa5.65□□□□□ -1.5
GAPVD1-202ENST00000297933 TICRRQ7Z2Z1 1910 aa5.65□□□□□ -1.5
GAPVD1-202ENST00000297933 A0A0A6YYD4 124 aa5.65□□□□□ -1.5
GAPVD1-202ENST00000297933 NPIPB5A8MRT5 1133 aa5.65□□□□□ -1.5
GAPVD1-202ENST00000297933 DEFB113Q30KQ7 82 aa5.65□□□□□ -1.5
GAPVD1-202ENST00000297933 ATOH7Q8N100 152 aa5.65□□□□□ -1.5
GAPVD1-202ENST00000297933 RNF182Q8N6D2 247 aa5.65□□□□□ -1.5
GAPVD1-202ENST00000297933 SCRT1Q9BWW7 348 aa5.65□□□□□ -1.5
GAPVD1-202ENST00000297933 IGKV1-27A0A075B6S5 117 aa5.65□□□□□ -1.5
GAPVD1-202ENST00000297933 NMBP08949 121 aa5.65□□□□□ -1.5
GAPVD1-202ENST00000297933 TRGV9Q99603 122 aa5.65□□□□□ -1.5
GAPVD1-202ENST00000297933 MRPL16Q9NX20 251 aaKnown RBP5.65□□□□□ -1.5
GAPVD1-202ENST00000297933 TRAV5A0A0B4J249 113 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 MPTX1A8MV57 137 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 HOXA3O43365 443 aaPredicted RBP5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 SMIM13P0DJ93 91 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 CGB3P0DN86 165 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 EVI2AP22794 236 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 CFHR2P36980 270 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 ORMDL2Q53FV1 153 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 NHLRC3Q5JS37 347 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 OR5A1Q8NGJ0 315 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 UQCR10Q9UDW1 63 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 A0A1W2PRE2 83 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 SHISA3A0PJX4 238 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 ZNF138P52744 262 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 EFNB3Q15768 340 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 SDHCQ99643 169 aaPredicted RBP5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 CST9LQ9H4G1 147 aa5.65□□□□□ -1.51
GAPVD1-202ENST00000297933 AMBPP02760 352 aa5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 IFITM3Q01628 133 aa5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 RNASE7Q9H1E1 156 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 MDC1Q14676 2089 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 SMIM6P0DI80 62 aa5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 CCL20P78556 96 aa5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 TTC9CQ8N5M4 171 aa5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 CEP290O15078 2479 aa5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 SPTBP11277 2137 aa5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 ATP6V0E1O15342 81 aa5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 TOMM40O96008 361 aa5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 ZNF876PQ49A33 203 aa5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 COL5A1-AS1Q5SY13 56 aa5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 APOMO95445 188 aa5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 MST1LQ2TV78 715 aa5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 PNRC2Q9NPJ4 139 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 FNDC1Q4ZHG4 1894 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 CA1P00915 261 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 SUPT4H1P63272 117 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-202ENST00000297933 Q6P435 159 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms