RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 TSPAN13O95857 204 aa14.21□□□□□ -0.13
SHANK1-201ENST00000293441 SEPSECSQ9HD40 501 aaKnown RBP14.21□□□□□ -0.13
SHANK1-201ENST00000293441 C5orf63A6NC05 138 aa14.21□□□□□ -0.13
SHANK1-201ENST00000293441 ADARB2-AS1A8MUL3 147 aa14.21□□□□□ -0.13
SHANK1-201ENST00000293441 CD28P10747 220 aa14.21□□□□□ -0.13
SHANK1-201ENST00000293441 BUB1B-PAK6H3BSN5 160 aa14.21□□□□□ -0.13
SHANK1-201ENST00000293441 M0R1W7 72 aa14.21□□□□□ -0.13
SHANK1-201ENST00000293441 SCRT1Q9BWW7 348 aa14.21□□□□□ -0.13
SHANK1-201ENST00000293441 VWA8A3KMH1 1905 aa14.21□□□□□ -0.13
SHANK1-201ENST00000293441 TICRRQ7Z2Z1 1910 aa14.21□□□□□ -0.13
SHANK1-201ENST00000293441 KLF17Q5JT82 389 aaPredicted RBP14.21□□□□□ -0.13
SHANK1-201ENST00000293441 MGAMO43451 1857 aa14.21□□□□□ -0.14
SHANK1-201ENST00000293441 ADMP35318 185 aa14.21□□□□□ -0.14
SHANK1-201ENST00000293441 RIPPLY3P57055 190 aa14.21□□□□□ -0.14
SHANK1-201ENST00000293441 RNF223E7ERA6 249 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 SRSF1Q07955 248 aaKnown RBP eCLIP14.2□□□□□ -0.14
SHANK1-201ENST00000293441 ZNF474Q6S9Z5 364 aaPredicted RBP14.2□□□□□ -0.14
SHANK1-201ENST00000293441 RCHY1Q96PM5 261 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 WFDC1Q9HC57 220 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 PGPEP1LA6NFU8 196 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 PSG1P11464 419 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 ACTL10Q5JWF8 245 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 COQ2Q96H96 371 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 MAPK1IP1LQ8NDC0 245 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 VSIRQ9H7M9 311 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 PNRC2Q9NPJ4 139 aaKnown RBP14.2□□□□□ -0.14
SHANK1-201ENST00000293441 CARHSP1Q9Y2V2 147 aaKnown RBP14.2□□□□□ -0.14
SHANK1-201ENST00000293441 ZNF688P0C7X2 276 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 B3GALT5-AS1P59052 145 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 ZSWIM8A7E2V4 1837 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 TRAV3A0A0B4J244 114 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 TTC32Q5I0X7 151 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 C5orf24Q7Z6I8 188 aa14.2□□□□□ -0.14
SHANK1-201ENST00000293441 INTS1Q8N201 2190 aaKnown RBP14.19□□□□□ -0.14
SHANK1-201ENST00000293441 TRAV9-1A0A075B6T8 112 aa14.19□□□□□ -0.14
SHANK1-201ENST00000293441 A0A1W2PRE2 83 aa14.19□□□□□ -0.14
SHANK1-201ENST00000293441 CMC4P56277 68 aaPredicted RBP14.19□□□□□ -0.14
SHANK1-201ENST00000293441 EXOC3-AS1Q8N2X6 119 aa14.19□□□□□ -0.14
SHANK1-201ENST00000293441 NUDT10Q8NFP7 164 aa14.19□□□□□ -0.14
SHANK1-201ENST00000293441 PRADC1Q9BSG0 188 aa14.19□□□□□ -0.14
SHANK1-201ENST00000293441 SLC25A39Q9BZJ4 359 aaPredicted RBP14.19□□□□□ -0.14
SHANK1-201ENST00000293441 DEFB104AQ8WTQ1 72 aa14.19□□□□□ -0.14
SHANK1-201ENST00000293441 H0YJW9 148 aa14.19□□□□□ -0.14
SHANK1-201ENST00000293441 K7ENP7 123 aa14.19□□□□□ -0.14
SHANK1-201ENST00000293441 ID3Q02535 119 aa14.19□□□□□ -0.14
SHANK1-201ENST00000293441 HEATR1Q9H583 2144 aaKnown RBP14.19□□□□□ -0.14
SHANK1-201ENST00000293441 TRBV7-1A0A0A6YYK4 115 aa14.19□□□□□ -0.14
SHANK1-201ENST00000293441 E7EQL1 145 aa14.19□□□□□ -0.14
SHANK1-201ENST00000293441 SLC25A16P16260 332 aa14.19□□□□□ -0.14
SHANK1-201ENST00000293441 C3orf56Q8N813 242 aa14.19□□□□□ -0.14
SHANK1-201ENST00000293441 GZMBP10144 247 aa14.18□□□□□ -0.14
SHANK1-201ENST00000293441 C21orf62-AS1Q17RA5 79 aa14.18□□□□□ -0.14
SHANK1-201ENST00000293441 TEX38Q6PEX7 206 aa14.18□□□□□ -0.14
SHANK1-201ENST00000293441 LY6G6FQ5SQ64 297 aa14.18□□□□□ -0.14
SHANK1-201ENST00000293441 TREML4Q6UXN2 200 aa14.18□□□□□ -0.14
SHANK1-201ENST00000293441 BEND2Q8NDZ0 799 aa14.18□□□□□ -0.14
SHANK1-201ENST00000293441 IGHV3-53P01767 116 aa14.18□□□□□ -0.14
SHANK1-201ENST00000293441 C5orf64Q2M2E5 130 aa14.18□□□□□ -0.14
SHANK1-201ENST00000293441 A0A087WWC5 75 aa14.18□□□□□ -0.14
SHANK1-201ENST00000293441 IGHG3P01860 377 aa14.18□□□□□ -0.14
SHANK1-201ENST00000293441 CYSLTR1Q9Y271 337 aa14.18□□□□□ -0.14
SHANK1-201ENST00000293441 IGHV3-64A0A075B6Q5 118 aa14.17□□□□□ -0.14
SHANK1-201ENST00000293441 OOSP1A8MZH6 123 aa14.17□□□□□ -0.14
SHANK1-201ENST00000293441 CA1P00915 261 aaPredicted RBP14.17□□□□□ -0.14
SHANK1-201ENST00000293441 OCC1Q8TAD7 63 aa14.17□□□□□ -0.14
SHANK1-201ENST00000293441 TRAV12-3A0A0B4J271 114 aa14.17□□□□□ -0.14
SHANK1-201ENST00000293441 SPATA31B1PQ5VZV4 182 aa14.17□□□□□ -0.14
SHANK1-201ENST00000293441 H0YIZ8 118 aa14.17□□□□□ -0.14
SHANK1-201ENST00000293441 FCN3O75636 299 aa14.17□□□□□ -0.14
SHANK1-201ENST00000293441 RUSC1-AS1Q66K80 236 aa14.17□□□□□ -0.14
SHANK1-201ENST00000293441 SLC25A20O43772 301 aa14.17□□□□□ -0.14
SHANK1-201ENST00000293441 C1QL4Q86Z23 238 aa14.17□□□□□ -0.14
SHANK1-201ENST00000293441 NAPSAO96009 420 aa14.16□□□□□ -0.14
SHANK1-201ENST00000293441 SRSF3P84103 164 aaKnown RBP14.16□□□□□ -0.14
SHANK1-201ENST00000293441 ASCL4Q6XD76 172 aa14.16□□□□□ -0.14
SHANK1-201ENST00000293441 WDR83OSQ9Y284 106 aa14.16□□□□□ -0.14
SHANK1-201ENST00000293441 TRGV1A0A0A0MS02 117 aa14.16□□□□□ -0.14
SHANK1-201ENST00000293441 SAA4P35542 130 aa14.16□□□□□ -0.14
SHANK1-201ENST00000293441 SPSB3Q6PJ21 355 aa14.16□□□□□ -0.14
SHANK1-201ENST00000293441 IGKV1D-17A0A075B6S4 117 aa14.16□□□□□ -0.14
SHANK1-201ENST00000293441 UBE2E2Q96LR5 201 aa14.16□□□□□ -0.14
SHANK1-201ENST00000293441 GGTLC1Q9BX51 225 aa14.16□□□□□ -0.14
SHANK1-201ENST00000293441 A0A1B0GWJ7 208 aa14.16□□□□□ -0.14
SHANK1-201ENST00000293441 SERF1AO75920 110 aa14.16□□□□□ -0.14
SHANK1-201ENST00000293441 F2Z2F3 143 aa14.15□□□□□ -0.14
SHANK1-201ENST00000293441 OSTCQ9NRP0 149 aa14.15□□□□□ -0.14
SHANK1-201ENST00000293441 A0A0U1RRA0 63 aa14.15□□□□□ -0.14
SHANK1-201ENST00000293441 CHTOPQ9Y3Y2 248 aaKnown RBP14.15□□□□□ -0.14
SHANK1-201ENST00000293441 PEF1Q9UBV8 284 aaKnown RBP14.15□□□□□ -0.14
SHANK1-201ENST00000293441 LINC00205P59089 165 aa14.15□□□□□ -0.15
SHANK1-201ENST00000293441 RNF182Q8N6D2 247 aa14.15□□□□□ -0.15
SHANK1-201ENST00000293441 MGST2Q99735 147 aa14.15□□□□□ -0.15
SHANK1-201ENST00000293441 TMEM8BA6NDV4 472 aa14.14□□□□□ -0.15
SHANK1-201ENST00000293441 Q5PR19 223 aa14.14□□□□□ -0.15
SHANK1-201ENST00000293441 Q6P435 159 aa14.14□□□□□ -0.15
SHANK1-201ENST00000293441 A0A087WX48 190 aa14.14□□□□□ -0.15
SHANK1-201ENST00000293441 SRRM4A7MD48 611 aaKnown RBP14.14□□□□□ -0.15
SHANK1-201ENST00000293441 TYMSP04818 313 aa14.14□□□□□ -0.15
SHANK1-201ENST00000293441 Q96MF0 132 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms