RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 SLC39A9Q9NUM3 307 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 H2AFB1P0C5Y9 115 aa14.64□□□□□ -0.07
PDLIM3-202ENST00000284770 GPR183P32249 361 aa14.64□□□□□ -0.07
PDLIM3-202ENST00000284770 SELENOTP62341 195 aa14.64□□□□□ -0.07
PDLIM3-202ENST00000284770 TIGITQ495A1 244 aa14.64□□□□□ -0.07
PDLIM3-202ENST00000284770 ZNF343Q6P1L6 599 aa14.64□□□□□ -0.07
PDLIM3-202ENST00000284770 SPSB3Q6PJ21 355 aa14.64□□□□□ -0.07
PDLIM3-202ENST00000284770 BPIFCQ8NFQ6 507 aa14.64□□□□□ -0.07
PDLIM3-202ENST00000284770 SCGB2A1O75556 95 aa14.63□□□□□ -0.07
PDLIM3-202ENST00000284770 IGHV3-11P01762 117 aa14.63□□□□□ -0.07
PDLIM3-202ENST00000284770 GATA2P23769 480 aaPredicted RBP14.63□□□□□ -0.07
PDLIM3-202ENST00000284770 TCTEX1D4Q5JR98 221 aa14.63□□□□□ -0.07
PDLIM3-202ENST00000284770 MBD3L1Q8WWY6 194 aa14.63□□□□□ -0.07
PDLIM3-202ENST00000284770 MARC2Q969Z3 335 aa14.63□□□□□ -0.07
PDLIM3-202ENST00000284770 UBE2E2Q96LR5 201 aa14.63□□□□□ -0.07
PDLIM3-202ENST00000284770 CITED4Q96RK1 184 aa14.63□□□□□ -0.07
PDLIM3-202ENST00000284770 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 TRAV1-1A0A0B4J248 108 aa14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 NUPL2O15504 423 aaKnown RBP14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 PROK1P58294 105 aa14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 IL34Q6ZMJ4 242 aa14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 EIF4E3Q8N5X7 224 aaKnown RBP14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 CHRDL1Q9BU40 450 aa14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 A0A1B0GUS0 222 aa14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 NUDT19A8MXV4 375 aa14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 SEC14L6B5MCN3 397 aa14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 HAX1O00165 279 aa14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 TGOLN2O43493 480 aa14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 FABP1P07148 127 aa14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 ADMP35318 185 aa14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 YPEL3P61236 119 aaPredicted RBP14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 FAM209BQ5JX69 171 aa14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 SFT2D1Q8WV19 159 aa14.62□□□□□ -0.07
PDLIM3-202ENST00000284770 FAM122CQ6P4D5 195 aa14.61□□□□□ -0.07
PDLIM3-202ENST00000284770 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.61□□□□□ -0.07
PDLIM3-202ENST00000284770 SLC25A22Q9H936 323 aa14.61□□□□□ -0.07
PDLIM3-202ENST00000284770 C2CD3Q4AC94 2353 aa14.61□□□□□ -0.07
PDLIM3-202ENST00000284770 CTXND1A0A1B0GTU2 59 aa14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 RAB19A4D1S5 217 aa14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 TOMM40O96008 361 aa14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 RD3LP0DJH9 198 aa14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 PSG1P11464 419 aa14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 CCL20P78556 96 aa14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 ACTR3CQ9C0K3 210 aaPredicted RBP14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 GNB4Q9HAV0 340 aa14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 A0A1B0GV50 99 aa14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 PPP5D1E7EU14 171 aa14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 EIF3GO75821 320 aaKnown RBP eCLIP14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 CDX1P47902 265 aaPredicted RBP14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 CDC34P49427 236 aaPredicted RBP14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 LCN15Q6UWW0 184 aa14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 RAB24Q969Q5 203 aa14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 OR5B12Q96R08 314 aa14.6□□□□□ -0.07
PDLIM3-202ENST00000284770 ANKRD34BA5PLL1 514 aa14.59□□□□□ -0.07
PDLIM3-202ENST00000284770 MAP1LC3B2A6NCE7 125 aa14.59□□□□□ -0.07
PDLIM3-202ENST00000284770 TRBV12-3P01733 135 aa14.59□□□□□ -0.07
PDLIM3-202ENST00000284770 HBE1P02100 147 aa14.59□□□□□ -0.07
PDLIM3-202ENST00000284770 ARL3P36405 182 aa14.59□□□□□ -0.07
PDLIM3-202ENST00000284770 MAP1LC3BQ9GZQ8 125 aa14.59□□□□□ -0.07
PDLIM3-202ENST00000284770 PEF1Q9UBV8 284 aaKnown RBP14.59□□□□□ -0.07
PDLIM3-202ENST00000284770 JMJD1CQ15652 2540 aa14.58□□□□□ -0.07
PDLIM3-202ENST00000284770 LGALS1P09382 135 aaKnown RBP14.58□□□□□ -0.08
PDLIM3-202ENST00000284770 CD28P10747 220 aa14.58□□□□□ -0.08
PDLIM3-202ENST00000284770 FOXL1Q12952 345 aa14.58□□□□□ -0.08
PDLIM3-202ENST00000284770 OR51G1Q8NGK1 321 aa14.58□□□□□ -0.08
PDLIM3-202ENST00000284770 Q8WTZ3 238 aa14.58□□□□□ -0.08
PDLIM3-202ENST00000284770 WFDC12Q8WWY7 111 aa14.58□□□□□ -0.08
PDLIM3-202ENST00000284770 SCRT1Q9BWW7 348 aa14.58□□□□□ -0.08
PDLIM3-202ENST00000284770 FGF8P55075 233 aaPredicted RBP14.57□□□□□ -0.08
PDLIM3-202ENST00000284770 ZNF600Q6ZNG1 722 aa14.57□□□□□ -0.08
PDLIM3-202ENST00000284770 TMEM37Q8WXS4 190 aa14.57□□□□□ -0.08
PDLIM3-202ENST00000284770 SEPSECSQ9HD40 501 aaKnown RBP14.57□□□□□ -0.08
PDLIM3-202ENST00000284770 HMGB3O15347 200 aaKnown RBP14.57□□□□□ -0.08
PDLIM3-202ENST00000284770 SRSF3P84103 164 aaKnown RBP14.57□□□□□ -0.08
PDLIM3-202ENST00000284770 RELQ04864 619 aaPredicted RBP14.57□□□□□ -0.08
PDLIM3-202ENST00000284770 C11orf44Q8N8P7 122 aa14.57□□□□□ -0.08
PDLIM3-202ENST00000284770 ZNF414Q96IQ9 312 aa14.57□□□□□ -0.08
PDLIM3-202ENST00000284770 FAM210AQ96ND0 272 aa14.57□□□□□ -0.08
PDLIM3-202ENST00000284770 C19orf24Q9BVV8 132 aa14.57□□□□□ -0.08
PDLIM3-202ENST00000284770 IGHV3-35A0A0C4DH35 117 aa14.56□□□□□ -0.08
PDLIM3-202ENST00000284770 A0A1W2PPV4 95 aa14.56□□□□□ -0.08
PDLIM3-202ENST00000284770 I3L521 148 aa14.56□□□□□ -0.08
PDLIM3-202ENST00000284770 BMPR1BO00238 502 aa14.56□□□□□ -0.08
PDLIM3-202ENST00000284770 OR2C1O95371 312 aa14.56□□□□□ -0.08
PDLIM3-202ENST00000284770 OR5G3P0C626 314 aa14.56□□□□□ -0.08
PDLIM3-202ENST00000284770 PLP1P60201 277 aa14.56□□□□□ -0.08
PDLIM3-202ENST00000284770 RHOBP62745 196 aa14.56□□□□□ -0.08
PDLIM3-202ENST00000284770 KHDC1LQ5JSQ8 128 aa14.56□□□□□ -0.08
PDLIM3-202ENST00000284770 UQCC3Q6UW78 93 aa14.56□□□□□ -0.08
PDLIM3-202ENST00000284770 PRIMA1Q86XR5 153 aa14.56□□□□□ -0.08
PDLIM3-202ENST00000284770 C4orf3Q8WVX3 66 aa14.56□□□□□ -0.08
PDLIM3-202ENST00000284770 PUS1Q9Y606 427 aaKnown RBP eCLIP14.56□□□□□ -0.08
PDLIM3-202ENST00000284770 WI2-2373I1.2A0A1W2PRP0 233 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 GGCTO75223 188 aaKnown RBP14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 IL4P05112 153 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 SPATA31B1PQ5VZV4 182 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 PATE2Q6UY27 113 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 GATAD1Q8WUU5 269 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 DNAJC4Q9NNZ3 241 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 STAG3L2P0CL84 134 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms