RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 OR11H12B2RN74 326 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 CHEK1O14757 476 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 CST7O76096 145 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 APOHP02749 345 aaPredicted RBP4.92□□□□□ -1.62
CD44-204ENST00000279452 HNRNPCP07910 306 aaKnown RBP eCLIP4.92□□□□□ -1.62
CD44-204ENST00000279452 C8orf88P0DMB2 117 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 IGHV4-30-4P0DP06 118 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 PSG1P11464 419 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 EIF2B2P49770 351 aaKnown RBP4.92□□□□□ -1.62
CD44-204ENST00000279452 PAX9P55771 341 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 TAS2R30P59541 319 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 YPEL3P61236 119 aaPredicted RBP4.92□□□□□ -1.62
CD44-204ENST00000279452 PAFAH1B2P68402 229 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 CYCSP99999 105 aaKnown RBP4.92□□□□□ -1.62
CD44-204ENST00000279452 SLC38A11Q08AI6 406 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 USF2Q15853 346 aaPredicted RBP4.92□□□□□ -1.62
CD44-204ENST00000279452 STXBP6Q8NFX7 210 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 SPAG8Q99932 426 aaPredicted RBP4.92□□□□□ -1.62
CD44-204ENST00000279452 WFDC10AQ9H1F0 79 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 DOK5Q9P104 306 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 PFDN2Q9UHV9 154 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 TNCP24821 2201 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 UBE2L5PA0A1B0GUS4 154 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 ZNF785A8K8V0 405 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 PRSS46E5RG02 174 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 TSPAN4O14817 238 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 DFFBO76075 338 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 FRMD6-AS1P0C7T7 363 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 PET100P0DJ07 73 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 ORM2P19652 201 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 GATA2P23769 480 aaPredicted RBP4.91□□□□□ -1.62
CD44-204ENST00000279452 P2RY1P47900 373 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 DLK1P80370 383 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 BAXQ07812 192 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 TMEM14EPQ6UXP3 125 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 DEFB125Q8N687 156 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 BPIFCQ8NFQ6 507 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 OR1B1Q8NGR6 318 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 ZNF414Q96IQ9 312 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 TRGV9Q99603 122 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 B9D2Q9BPU9 175 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 NMES1Q9C002 83 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 MED28Q9H204 178 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 SRD5A3Q9H8P0 318 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 LSM4Q9Y4Z0 139 aaKnown RBP4.91□□□□□ -1.62
CD44-204ENST00000279452 MGAM2Q2M2H8 2515 aa4.91□□□□□ -1.62
CD44-204ENST00000279452 IGKV1D-37A0A075B6S9 117 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 IGSF23A1L1A6 192 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 HELTA6NFD8 242 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 E5RGE8 158 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 DEDDO75618 318 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 CD5P06127 495 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 OR5G3P0C626 314 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 LINC00869P0C866 280 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 CRYBB3P26998 211 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 NUP62P37198 522 aaPredicted RBP4.9□□□□□ -1.63
CD44-204ENST00000279452 SULT1A1P50225 295 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 H2BFSP57053 126 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 RAP2BP61225 183 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 HBG1P69891 147 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 HBG2P69892 147 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 RAB31Q13636 194 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 TEPPQ6URK8 271 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 CYP2G1PQ6ZSU1 146 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 TMEM144Q7Z5S9 345 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 Q8N1Y9 231 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 THAP8Q8NA92 274 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 PPP1R1CQ8WVI7 109 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 TMEM147Q9BVK8 224 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 SLC25A31Q9H0C2 315 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 MS4A6AQ9H2W1 248 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 SLC25A22Q9H936 323 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 NPVFQ9HCQ7 196 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 LYRM2Q9NU23 88 aaPredicted RBP4.9□□□□□ -1.63
CD44-204ENST00000279452 UQCC1Q9NVA1 299 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 OR5AC2Q9NZP5 309 aa4.9□□□□□ -1.63
CD44-204ENST00000279452 NBEAL1Q6ZS30 2694 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 IGKV1OR2-108A0A075B7D4 117 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 PMS2P5A8MQ11 134 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 CFDP00746 253 aaPredicted RBP4.89□□□□□ -1.63
CD44-204ENST00000279452 S100A7P31151 101 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 S100A11P31949 105 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 EWSR1Q01844 656 aaKnown RBP eCLIP4.89□□□□□ -1.63
CD44-204ENST00000279452 ARL16Q0P5N6 197 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 CLINT1Q14677 625 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 FCN2Q15485 313 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 SIGLEC15Q6ZMC9 328 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 ZNF546Q86UE3 836 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 APRG1Q8IVJ8 170 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 OR8I2Q8N0Y5 310 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 TMEM252Q8N6L7 170 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 THAP6Q8TBB0 222 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 GGACTQ9BVM4 153 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 VSIRQ9H7M9 311 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 ZMAT4Q9H898 229 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 MBD2Q9UBB5 411 aa4.89□□□□□ -1.63
CD44-204ENST00000279452 LOC102724200A0A096LPH7 203 aaPredicted RBP4.88□□□□□ -1.63
CD44-204ENST00000279452 FNDC10F2Z333 226 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 AGPAT2O15120 278 aa4.88□□□□□ -1.63
CD44-204ENST00000279452 COX7A2P2O60397 106 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms