RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 TIGITQ495A1 244 aa11.01□□□□□ -0.65
SS18-201ENST00000269137 ZNF506Q5JVG8 444 aa11.01□□□□□ -0.65
SS18-201ENST00000269137 SPATA31B1PQ5VZV4 182 aa11.01□□□□□ -0.65
SS18-201ENST00000269137 ZNF502Q8TBZ5 544 aa11.01□□□□□ -0.65
SS18-201ENST00000269137 MRPL32Q9BYC8 188 aaKnown RBP11.01□□□□□ -0.65
SS18-201ENST00000269137 GNG13Q9P2W3 67 aa11.01□□□□□ -0.65
SS18-201ENST00000269137 LINC00527Q9UJ94 153 aa11.01□□□□□ -0.65
SS18-201ENST00000269137 MTORP42345 2549 aa11.01□□□□□ -0.65
SS18-201ENST00000269137 FAM223BA6NKX1 122 aa11□□□□□ -0.65
SS18-201ENST00000269137 COX7A2P2O60397 106 aa11□□□□□ -0.65
SS18-201ENST00000269137 CXorf1O96002 111 aa11□□□□□ -0.65
SS18-201ENST00000269137 RD3LP0DJH9 198 aa11□□□□□ -0.65
SS18-201ENST00000269137 PSG1P11464 419 aa11□□□□□ -0.65
SS18-201ENST00000269137 PSMB3P49720 205 aa11□□□□□ -0.65
SS18-201ENST00000269137 KHDC3LQ587J8 217 aa11□□□□□ -0.65
SS18-201ENST00000269137 PATE2Q6UY27 113 aa11□□□□□ -0.65
SS18-201ENST00000269137 RBMS3Q6XE24 437 aaKnown RBP11□□□□□ -0.65
SS18-201ENST00000269137 FAM223AQ8IWN6 122 aa11□□□□□ -0.65
SS18-201ENST00000269137 NOL4LQ96MY1 436 aaPredicted RBP11□□□□□ -0.65
SS18-201ENST00000269137 ATP6V0BQ99437 205 aa11□□□□□ -0.65
SS18-201ENST00000269137 PRSS22Q9GZN4 317 aa11□□□□□ -0.65
SS18-201ENST00000269137 NPFFR1Q9GZQ6 430 aa11□□□□□ -0.65
SS18-201ENST00000269137 GAR1Q9NY12 217 aaKnown RBP11□□□□□ -0.65
SS18-201ENST00000269137 LOC102723971A0A1B0GUV8 181 aa11□□□□□ -0.65
SS18-201ENST00000269137 SCGB2A1O75556 95 aa11□□□□□ -0.65
SS18-201ENST00000269137 TOMM40O96008 361 aa11□□□□□ -0.65
SS18-201ENST00000269137 IFNA1P01562 189 aa11□□□□□ -0.65
SS18-201ENST00000269137 BCL2P10415 239 aa11□□□□□ -0.65
SS18-201ENST00000269137 ATF4P18848 351 aaPredicted RBP11□□□□□ -0.65
SS18-201ENST00000269137 TAGLN2P37802 199 aaKnown RBP11□□□□□ -0.65
SS18-201ENST00000269137 PPT1P50897 306 aa11□□□□□ -0.65
SS18-201ENST00000269137 CFHR3Q02985 330 aa11□□□□□ -0.65
SS18-201ENST00000269137 SCGB2A2Q13296 93 aa11□□□□□ -0.65
SS18-201ENST00000269137 HAGHQ16775 308 aa11□□□□□ -0.65
SS18-201ENST00000269137 Q56UQ5 140 aa11□□□□□ -0.65
SS18-201ENST00000269137 C10orf113Q5VZT2 155 aa11□□□□□ -0.65
SS18-201ENST00000269137 MIR17HGQ75NE6 70 aa11□□□□□ -0.65
SS18-201ENST00000269137 RARRES2Q99969 163 aa11□□□□□ -0.65
SS18-201ENST00000269137 TMPRSS5Q9H3S3 457 aa11□□□□□ -0.65
SS18-201ENST00000269137 TECRQ9NZ01 308 aaKnown RBP11□□□□□ -0.65
SS18-201ENST00000269137 S4R3C0 116 aa11□□□□□ -0.65
SS18-201ENST00000269137 HIVEP2P31629 2446 aa10.99□□□□□ -0.65
SS18-201ENST00000269137 TRBV7-1A0A0A6YYK4 115 aa10.99□□□□□ -0.65
SS18-201ENST00000269137 HYPMO75409 117 aa10.99□□□□□ -0.65
SS18-201ENST00000269137 IGLV1-40P01703 118 aa10.99□□□□□ -0.65
SS18-201ENST00000269137 ARL14EPLP0DKL9 152 aa10.99□□□□□ -0.65
SS18-201ENST00000269137 TAS2R45P59539 299 aa10.99□□□□□ -0.65
SS18-201ENST00000269137 ICAM4Q14773 271 aa10.99□□□□□ -0.65
SS18-201ENST00000269137 MS4A10Q96PG2 267 aa10.99□□□□□ -0.65
SS18-201ENST00000269137 MANBALQ9NQG1 85 aa10.99□□□□□ -0.65
SS18-201ENST00000269137 HSPB1P04792 205 aaKnown RBP10.98□□□□□ -0.65
SS18-201ENST00000269137 CTSGP08311 255 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 C8orf88P0DMB2 117 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 ATP5G2Q06055 141 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 OR51G1Q8NGK1 321 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 EEF1AKMT3Q96AZ1 226 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 DOK5Q9P104 306 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 VAX2Q9UIW0 290 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 TRGV3P03979 118 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 ORM2P19652 201 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 GCHFRP30047 84 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 PQLC2Q6ZP29 291 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 CLRN3Q8NCR9 226 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 OR1B1Q8NGR6 318 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 USMG5Q96IX5 58 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 SLC35B3Q9H1N7 401 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 ZNF702PQ9H963 129 aa10.98□□□□□ -0.65
SS18-201ENST00000269137 TMEM89A2RUT3 159 aa10.97□□□□□ -0.65
SS18-201ENST00000269137 OR2T8A6NH00 312 aa10.97□□□□□ -0.65
SS18-201ENST00000269137 NDUFS6O75380 124 aaKnown RBP10.97□□□□□ -0.65
SS18-201ENST00000269137 OR2C1O95371 312 aa10.97□□□□□ -0.65
SS18-201ENST00000269137 IGHV3-23P01764 117 aa10.97□□□□□ -0.65
SS18-201ENST00000269137 Q8N2B8 174 aa10.97□□□□□ -0.65
SS18-201ENST00000269137 ZNF491Q8N8L2 437 aa10.97□□□□□ -0.65
SS18-201ENST00000269137 Q8WTZ3 238 aa10.97□□□□□ -0.65
SS18-201ENST00000269137 FAM167A-AS1Q96KT0 104 aa10.97□□□□□ -0.65
SS18-201ENST00000269137 CCDC140Q96MF4 163 aa10.97□□□□□ -0.65
SS18-201ENST00000269137 WI2-2373I1.2A0A1W2PRP0 233 aa10.96□□□□□ -0.65
SS18-201ENST00000269137 LY6G6DO95868 133 aa10.96□□□□□ -0.65
SS18-201ENST00000269137 IGHG4P01861 327 aa10.96□□□□□ -0.65
SS18-201ENST00000269137 CLEC3BP05452 202 aa10.96□□□□□ -0.65
SS18-201ENST00000269137 ADMP35318 185 aa10.96□□□□□ -0.65
SS18-201ENST00000269137 TMEM88Q6PEY1 159 aa10.96□□□□□ -0.65
SS18-201ENST00000269137 LINC00305Q7Z4B0 112 aa10.96□□□□□ -0.65
SS18-201ENST00000269137 IQCF2Q8IXL9 164 aa10.96□□□□□ -0.65
SS18-201ENST00000269137 RXFP4Q8TDU9 374 aa10.96□□□□□ -0.65
SS18-201ENST00000269137 UHRF2Q96PU4 802 aa10.96□□□□□ -0.65
SS18-201ENST00000269137 CHRDL1Q9BU40 450 aa10.96□□□□□ -0.65
SS18-201ENST00000269137 MRPL27Q9P0M9 148 aaKnown RBP10.96□□□□□ -0.65
SS18-201ENST00000269137 HIGD1AQ9Y241 93 aa10.96□□□□□ -0.65
SS18-201ENST00000269137 CLDN34H7C241 214 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 SRP19P09132 144 aaKnown RBP10.95□□□□□ -0.66
SS18-201ENST00000269137 FOSL1P15407 271 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 TPPP2P59282 170 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 LYZP61626 148 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 TMEM95Q3KNT9 176 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 MORN5Q5VZ52 161 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 RNF125Q96EQ8 232 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 ZNF503Q96F45 646 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 SLC25A2Q9BXI2 301 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms