RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ERVK11-1P61568 191 aa13.91□□□□□ -0.18
TSPAN3-201ENST00000267970 HSD52Q0P140 79 aa13.91□□□□□ -0.18
TSPAN3-201ENST00000267970 RGPD3A6NKT7 1758 aaPredicted RBP13.91□□□□□ -0.18
TSPAN3-201ENST00000267970 C1orf162Q8NEQ5 155 aaPredicted RBP13.91□□□□□ -0.18
TSPAN3-201ENST00000267970 C17orf100A8MU93 164 aa13.91□□□□□ -0.18
TSPAN3-201ENST00000267970 HOXB1P14653 301 aaPredicted RBP13.91□□□□□ -0.18
TSPAN3-201ENST00000267970 LYZL1Q6UWQ5 148 aa13.9□□□□□ -0.18
TSPAN3-201ENST00000267970 MS4A6AQ9H2W1 248 aa13.9□□□□□ -0.18
TSPAN3-201ENST00000267970 ASPHD1Q5U4P2 390 aa13.9□□□□□ -0.18
TSPAN3-201ENST00000267970 HAPLN4Q86UW8 402 aa13.9□□□□□ -0.18
TSPAN3-201ENST00000267970 OR9G4Q8NGQ1 327 aa13.9□□□□□ -0.18
TSPAN3-201ENST00000267970 JPT2Q9H910 190 aa13.9□□□□□ -0.18
TSPAN3-201ENST00000267970 LINC00312Q9Y6C7 94 aa13.9□□□□□ -0.18
TSPAN3-201ENST00000267970 TRAV40A0A0B4J280 105 aa13.9□□□□□ -0.18
TSPAN3-201ENST00000267970 A0A1B0GUS0 222 aa13.9□□□□□ -0.18
TSPAN3-201ENST00000267970 SRSF8Q9BRL6 282 aaKnown RBP13.9□□□□□ -0.18
TSPAN3-201ENST00000267970 ZIC4Q8N9L1 334 aa13.9□□□□□ -0.18
TSPAN3-201ENST00000267970 IQCF6A8MYZ5 107 aa13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 CDK2AP2O75956 126 aa13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 ADAMTSL5Q6ZMM2 481 aa13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 C5orf63A6NC05 138 aa13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 LINC00477Q96M19 166 aa13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 GNB1LQ9BYB4 327 aa13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 A0A1B0GW15 77 aa13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 COLCA2A8K830 154 aa13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 TNFSF13O75888 250 aa13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 SIGLEC15Q6ZMC9 328 aa13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 FER1L5A0AVI2 2057 aa13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 MARF1Q9Y4F3 1742 aaKnown RBP13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 A0A1W2PR77 199 aa13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 LAGE3Q14657 143 aa13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 MRPL52Q86TS9 123 aaKnown RBP13.89□□□□□ -0.19
TSPAN3-201ENST00000267970 LGALS1P09382 135 aaKnown RBP13.88□□□□□ -0.19
TSPAN3-201ENST00000267970 ITGB1BP1O14713 200 aa13.88□□□□□ -0.19
TSPAN3-201ENST00000267970 METRNQ9UJH8 293 aa13.88□□□□□ -0.19
TSPAN3-201ENST00000267970 C9orf153Q5TBE3 101 aa13.88□□□□□ -0.19
TSPAN3-201ENST00000267970 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.88□□□□□ -0.19
TSPAN3-201ENST00000267970 CACNG8Q8WXS5 425 aa13.88□□□□□ -0.19
TSPAN3-201ENST00000267970 SLC25A39Q9BZJ4 359 aaPredicted RBP13.88□□□□□ -0.19
TSPAN3-201ENST00000267970 FOXF2Q12947 444 aa13.88□□□□□ -0.19
TSPAN3-201ENST00000267970 LY6DQ14210 128 aa13.88□□□□□ -0.19
TSPAN3-201ENST00000267970 ZNF876PQ49A33 203 aa13.88□□□□□ -0.19
TSPAN3-201ENST00000267970 SUMO4Q6EEV6 95 aa13.88□□□□□ -0.19
TSPAN3-201ENST00000267970 UBE2E2Q96LR5 201 aa13.88□□□□□ -0.19
TSPAN3-201ENST00000267970 SPRR3Q9UBC9 169 aa13.88□□□□□ -0.19
TSPAN3-201ENST00000267970 A0A087WWL8 130 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 IGKV1-12A0A0C4DH73 117 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 IGKV1D-12P01611 117 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 ZNF688P0C7X2 276 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 KIR3DS1Q14943 382 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 MLANAQ16655 118 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 Q6AWC8 147 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 TREML4Q6UXN2 200 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 MGST2Q99735 147 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 VGLL1Q99990 258 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 OSTCQ9NRP0 149 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 TSKUQ8WUA8 353 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 USP54Q70EL1 1684 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 TMEM133Q9H2Q1 129 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 GAGE12BA1L429 117 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 C9JAW5 83 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 F8VVB4 439 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 F8VWA3 439 aa13.87□□□□□ -0.19
TSPAN3-201ENST00000267970 IGHV1-18A0A0C4DH31 117 aa13.86□□□□□ -0.19
TSPAN3-201ENST00000267970 DUTP33316 252 aaKnown RBP13.86□□□□□ -0.19
TSPAN3-201ENST00000267970 PEMTQ9UBM1 199 aa13.86□□□□□ -0.19
TSPAN3-201ENST00000267970 VWC2LB2RUY7 222 aa13.86□□□□□ -0.19
TSPAN3-201ENST00000267970 CSRP3P50461 194 aa13.86□□□□□ -0.19
TSPAN3-201ENST00000267970 ERCC8Q13216 396 aa13.86□□□□□ -0.19
TSPAN3-201ENST00000267970 LINC00114Q6XXX2 140 aa13.86□□□□□ -0.19
TSPAN3-201ENST00000267970 SEC11AP67812 179 aa13.86□□□□□ -0.19
TSPAN3-201ENST00000267970 SRSF7Q16629 238 aaKnown RBP eCLIP13.86□□□□□ -0.19
TSPAN3-201ENST00000267970 ACTL10Q5JWF8 245 aa13.86□□□□□ -0.19
TSPAN3-201ENST00000267970 PAX8Q06710 450 aa13.85□□□□□ -0.19
TSPAN3-201ENST00000267970 BRD3OSQ6XYD6 125 aa13.85□□□□□ -0.19
TSPAN3-201ENST00000267970 KLHDC3Q9BQ90 382 aa13.85□□□□□ -0.19
TSPAN3-201ENST00000267970 YPEL1O60688 119 aa13.85□□□□□ -0.19
TSPAN3-201ENST00000267970 FCN3O75636 299 aa13.85□□□□□ -0.19
TSPAN3-201ENST00000267970 PRB2P02812 416 aaPredicted RBP13.85□□□□□ -0.19
TSPAN3-201ENST00000267970 LINC00479Q96M42 142 aa13.85□□□□□ -0.19
TSPAN3-201ENST00000267970 RCHY1Q96PM5 261 aa13.85□□□□□ -0.19
TSPAN3-201ENST00000267970 YPEL2Q96QA6 119 aa13.85□□□□□ -0.19
TSPAN3-201ENST00000267970 C14orf178Q8N769 122 aaPredicted RBP13.85□□□□□ -0.19
TSPAN3-201ENST00000267970 C8orf46Q8TAG6 207 aa13.85□□□□□ -0.19
TSPAN3-201ENST00000267970 IGKV1-27A0A075B6S5 117 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 TRAV9-1A0A075B6T8 112 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 LILRA1O75019 489 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 PRSS57Q6UWY2 283 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 TMEM86BQ8N661 226 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 STPG4Q8N801 248 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 NUP35Q8NFH5 326 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 TRAV13-1A0A0B4J241 112 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 SPXQ9BT56 116 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 GGTLC1Q9BX51 225 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 TRGV1A0A0A0MS02 117 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 RS1O15537 224 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 SH2D1AO60880 128 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 FAM57AQ8TBR7 257 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 CYTL1Q9NRR1 136 aa13.84□□□□□ -0.19
TSPAN3-201ENST00000267970 CEP290O15078 2479 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 993.7 ms