RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 ZNF430Q9H8G1 570 aaPredicted RBP14.48□□□□□ -0.09
TRAF4-201ENST00000262395 GVINP1Q7Z2Y8 2422 aa14.48□□□□□ -0.09
TRAF4-201ENST00000262395 H0YJW9 148 aa14.48□□□□□ -0.09
TRAF4-201ENST00000262395 SSX8Q7RTT4 187 aa14.48□□□□□ -0.09
TRAF4-201ENST00000262395 FAM222BQ8WU58 562 aa14.48□□□□□ -0.09
TRAF4-201ENST00000262395 ZNF714Q96N38 554 aa14.48□□□□□ -0.09
TRAF4-201ENST00000262395 K7EP13 123 aa14.48□□□□□ -0.09
TRAF4-201ENST00000262395 SP9P0CG40 484 aa14.48□□□□□ -0.09
TRAF4-201ENST00000262395 PDPNQ86YL7 162 aa14.48□□□□□ -0.09
TRAF4-201ENST00000262395 SLC25A17O43808 307 aa14.47□□□□□ -0.09
TRAF4-201ENST00000262395 DLX1P56177 255 aa14.47□□□□□ -0.09
TRAF4-201ENST00000262395 FAM27E3Q08E93 113 aa14.47□□□□□ -0.09
TRAF4-201ENST00000262395 DEFB109BQ30KR1 87 aa14.47□□□□□ -0.09
TRAF4-201ENST00000262395 WIPF2Q8TF74 440 aaPredicted RBP14.47□□□□□ -0.09
TRAF4-201ENST00000262395 LOXL4Q96JB6 756 aa14.47□□□□□ -0.09
TRAF4-201ENST00000262395 POLEQ07864 2286 aa14.47□□□□□ -0.09
TRAF4-201ENST00000262395 IGHV2-26A0A0B4J1V2 119 aa14.47□□□□□ -0.09
TRAF4-201ENST00000262395 TRAV17A0A0B4J275 112 aa14.47□□□□□ -0.09
TRAF4-201ENST00000262395 TCRBV4S1A1TA0A5B7 111 aa14.47□□□□□ -0.09
TRAF4-201ENST00000262395 HIST1H1EP10412 219 aaKnown RBP14.47□□□□□ -0.09
TRAF4-201ENST00000262395 CA7P43166 264 aa14.47□□□□□ -0.09
TRAF4-201ENST00000262395 CACNG8Q8WXS5 425 aa14.47□□□□□ -0.09
TRAF4-201ENST00000262395 PMCHL2Q9BQD1 86 aa14.47□□□□□ -0.09
TRAF4-201ENST00000262395 EPDR1Q9UM22 224 aa14.47□□□□□ -0.09
TRAF4-201ENST00000262395 hADV38S2A0JD32 116 aa14.46□□□□□ -0.09
TRAF4-201ENST00000262395 FAM231DQ6ZW35 169 aa14.46□□□□□ -0.09
TRAF4-201ENST00000262395 OR4F17Q8NGA8 305 aa14.46□□□□□ -0.09
TRAF4-201ENST00000262395 OR10X1Q8NGY0 326 aa14.46□□□□□ -0.09
TRAF4-201ENST00000262395 TRAV8-1A0A0A6YYK1 113 aa14.46□□□□□ -0.09
TRAF4-201ENST00000262395 OR4C46A6NHA9 309 aa14.46□□□□□ -0.09
TRAF4-201ENST00000262395 ENSAO43768 121 aaKnown RBP14.46□□□□□ -0.09
TRAF4-201ENST00000262395 GTSF1Q8WW33 167 aa14.46□□□□□ -0.09
TRAF4-201ENST00000262395 C7orf69Q9H7B7 122 aa14.46□□□□□ -0.09
TRAF4-201ENST00000262395 ZZEF1O43149 2961 aa14.46□□□□□ -0.1
TRAF4-201ENST00000262395 C22orf46C9J442 243 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 FAM87AP0C7U9 286 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 LDLRAD2Q5SZI1 272 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 ZNF833PQ6ZTB9 187 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 OR1L4Q8NGR5 311 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 OSR1Q8TAX0 266 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-201ENST00000262395 ZNF596Q8TC21 504 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 MRPS16Q9Y3D3 137 aaKnown RBP14.45□□□□□ -0.1
TRAF4-201ENST00000262395 FCN3O75636 299 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 FSTL3O95633 263 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 MPV17L2Q567V2 206 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 CSMD1Q96PZ7 3565 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 TMEM70Q9BUB7 260 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 ZNF835Q9Y2P0 537 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 IGLV3-9A0A075B6K5 115 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 TOMM40O96008 361 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 CSN3P07498 182 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 KLF5Q13887 457 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-201ENST00000262395 TMEM177Q53S58 311 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 TIMM23BQ5SRD1 257 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 SSUH2Q9Y2M2 353 aa14.45□□□□□ -0.1
TRAF4-201ENST00000262395 ATMQ13315 3056 aa14.44□□□□□ -0.1
TRAF4-201ENST00000262395 TNFSF4P23510 183 aa14.44□□□□□ -0.1
TRAF4-201ENST00000262395 HBBP68871 147 aa14.44□□□□□ -0.1
TRAF4-201ENST00000262395 IGHV2-70DA0A0C4DH43 119 aa14.43□□□□□ -0.1
TRAF4-201ENST00000262395 A0A1W2PPI3 338 aa14.43□□□□□ -0.1
TRAF4-201ENST00000262395 IGLC7A0M8Q6 106 aa14.43□□□□□ -0.1
TRAF4-201ENST00000262395 NBEAP1P0C6P0 100 aa14.43□□□□□ -0.1
TRAF4-201ENST00000262395 FAM120AOSQ5T036 256 aa14.43□□□□□ -0.1
TRAF4-201ENST00000262395 TMEM200BQ69YZ2 307 aa14.43□□□□□ -0.1
TRAF4-201ENST00000262395 CACNA1HO95180 2353 aa14.43□□□□□ -0.1
TRAF4-201ENST00000262395 IGHV1-24A0A0C4DH33 117 aa14.43□□□□□ -0.1
TRAF4-201ENST00000262395 OR2J3O76001 311 aa14.43□□□□□ -0.1
TRAF4-201ENST00000262395 GATA4P43694 442 aa14.43□□□□□ -0.1
TRAF4-201ENST00000262395 RASL11AQ6T310 242 aa14.43□□□□□ -0.1
TRAF4-201ENST00000262395 RPP21Q9H633 154 aaKnown RBP14.43□□□□□ -0.1
TRAF4-201ENST00000262395 A0A1B0GXF2 115 aa14.42□□□□□ -0.1
TRAF4-201ENST00000262395 P01737 135 aa14.42□□□□□ -0.1
TRAF4-201ENST00000262395 OR5AN1Q8NGI8 311 aa14.42□□□□□ -0.1
TRAF4-201ENST00000262395 GPR82Q96P67 336 aa14.42□□□□□ -0.1
TRAF4-201ENST00000262395 WASHC3Q9Y3C0 194 aa14.42□□□□□ -0.1
TRAF4-201ENST00000262395 LINC00312Q9Y6C7 94 aa14.42□□□□□ -0.1
TRAF4-201ENST00000262395 ZNF318Q5VUA4 2279 aa14.42□□□□□ -0.1
TRAF4-201ENST00000262395 LYPD2Q6UXB3 125 aa14.42□□□□□ -0.1
TRAF4-201ENST00000262395 OR4C13Q8NGP0 309 aa14.42□□□□□ -0.1
TRAF4-201ENST00000262395 NCOR1P1Q9H4R4 102 aa14.42□□□□□ -0.1
TRAF4-201ENST00000262395 TM4SF5O14894 197 aa14.42□□□□□ -0.1
TRAF4-201ENST00000262395 PLA2G2CQ5R387 149 aa14.42□□□□□ -0.1
TRAF4-201ENST00000262395 CIARTQ8N365 385 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-201ENST00000262395 MUC15Q8N387 334 aa14.42□□□□□ -0.1
TRAF4-201ENST00000262395 FAM215AQ9Y5M1 114 aa14.42□□□□□ -0.1
TRAF4-201ENST00000262395 MYCNOSP40205 109 aa14.41□□□□□ -0.1
TRAF4-201ENST00000262395 CCL17Q92583 94 aa14.41□□□□□ -0.1
TRAF4-201ENST00000262395 LEPROTL1O95214 131 aa14.41□□□□□ -0.1
TRAF4-201ENST00000262395 NUDT3O95989 172 aa14.41□□□□□ -0.1
TRAF4-201ENST00000262395 CNTFRP26992 372 aa14.41□□□□□ -0.1
TRAF4-201ENST00000262395 ATP5IP56385 69 aaPredicted RBP14.41□□□□□ -0.1
TRAF4-201ENST00000262395 SMIM15Q7Z3B0 74 aa14.41□□□□□ -0.1
TRAF4-201ENST00000262395 TMEM167AQ8TBQ9 72 aa14.41□□□□□ -0.1
TRAF4-201ENST00000262395 IGHV1-69-2A0A0G2JMI3 117 aa14.4□□□□□ -0.1
TRAF4-201ENST00000262395 SPAARA0A1B0GVQ0 90 aa14.4□□□□□ -0.1
TRAF4-201ENST00000262395 MBD3L4A6NDZ8 208 aaPredicted RBP14.4□□□□□ -0.1
TRAF4-201ENST00000262395 MBD3L3A6NE82 208 aaPredicted RBP14.4□□□□□ -0.1
TRAF4-201ENST00000262395 MBD3L5A6NJ08 208 aaPredicted RBP14.4□□□□□ -0.1
TRAF4-201ENST00000262395 SUB1P53999 127 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRAF4-201ENST00000262395 MBD3L2Q8NHZ7 208 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms