RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 CD7P09564 240 aa11.34□□□□□ -0.59
CDH1-201ENST00000261769 KLF17Q5JT82 389 aaPredicted RBP11.34□□□□□ -0.59
CDH1-201ENST00000261769 OR1N2Q8NGR9 330 aa11.34□□□□□ -0.59
CDH1-201ENST00000261769 ZNF524Q96C55 264 aa11.34□□□□□ -0.59
CDH1-201ENST00000261769 DCAF16Q9NXF7 216 aa11.34□□□□□ -0.59
CDH1-201ENST00000261769 ZFP30Q9Y2G7 519 aa11.34□□□□□ -0.59
CDH1-201ENST00000261769 CXorf65A6NEN9 183 aa11.34□□□□□ -0.59
CDH1-201ENST00000261769 LINC00473A8K010 186 aa11.34□□□□□ -0.59
CDH1-201ENST00000261769 PSG1P11464 419 aa11.34□□□□□ -0.59
CDH1-201ENST00000261769 HBBP68871 147 aa11.34□□□□□ -0.59
CDH1-201ENST00000261769 C1orf122Q6ZSJ8 110 aa11.34□□□□□ -0.59
CDH1-201ENST00000261769 GLMPQ8WWB7 406 aa11.34□□□□□ -0.59
CDH1-201ENST00000261769 PRORYQ9H606 182 aa11.34□□□□□ -0.59
CDH1-201ENST00000261769 TRBV9A0A0B4J1U6 114 aa11.33□□□□□ -0.6
CDH1-201ENST00000261769 A0A1B0GW15 77 aa11.33□□□□□ -0.6
CDH1-201ENST00000261769 OR11H12B2RN74 326 aa11.33□□□□□ -0.6
CDH1-201ENST00000261769 ADORA2A-AS1P86434 159 aa11.33□□□□□ -0.6
CDH1-201ENST00000261769 C9orf139Q6ZV77 190 aa11.33□□□□□ -0.6
CDH1-201ENST00000261769 RNF144BQ7Z419 303 aa11.33□□□□□ -0.6
CDH1-201ENST00000261769 LINC00311Q8N616 119 aa11.33□□□□□ -0.6
CDH1-201ENST00000261769 ZNF502Q8TBZ5 544 aa11.33□□□□□ -0.6
CDH1-201ENST00000261769 GEMIN7Q9H840 131 aaKnown RBP11.33□□□□□ -0.6
CDH1-201ENST00000261769 Q71RC1 249 aaPredicted RBP11.33□□□□□ -0.6
CDH1-201ENST00000261769 KIF26AQ9ULI4 1882 aaPredicted RBP11.33□□□□□ -0.6
CDH1-201ENST00000261769 A0A1B0GUT8 65 aa11.32□□□□□ -0.6
CDH1-201ENST00000261769 CRXO43186 299 aaPredicted RBP11.32□□□□□ -0.6
CDH1-201ENST00000261769 ERVK11-1P61568 191 aa11.32□□□□□ -0.6
CDH1-201ENST00000261769 LHFPL4Q7Z7J7 247 aa11.32□□□□□ -0.6
CDH1-201ENST00000261769 SOX21Q9Y651 276 aaPredicted RBP11.32□□□□□ -0.6
CDH1-201ENST00000261769 IGKV1-5P01602 117 aa11.32□□□□□ -0.6
CDH1-201ENST00000261769 FER1L6-AS1Q8NA97 138 aa11.32□□□□□ -0.6
CDH1-201ENST00000261769 EPDR1Q9UM22 224 aa11.32□□□□□ -0.6
CDH1-201ENST00000261769 BTCP35070 178 aa11.32□□□□□ -0.6
CDH1-201ENST00000261769 REC114Q7Z4M0 266 aa11.32□□□□□ -0.6
CDH1-201ENST00000261769 NMSQ5H8A3 153 aa11.31□□□□□ -0.6
CDH1-201ENST00000261769 FAM110DQ8TAY7 271 aaPredicted RBP11.31□□□□□ -0.6
CDH1-201ENST00000261769 RNF126Q9BV68 326 aa11.31□□□□□ -0.6
CDH1-201ENST00000261769 DAZ1Q9NQZ3 744 aaKnown RBP11.31□□□□□ -0.6
CDH1-201ENST00000261769 RNF222A6NCQ9 220 aa11.31□□□□□ -0.6
CDH1-201ENST00000261769 IGHV2-5P01817 119 aa11.31□□□□□ -0.6
CDH1-201ENST00000261769 TREML4Q6UXN2 200 aa11.31□□□□□ -0.6
CDH1-201ENST00000261769 IGKV3OR2-268A0A0C4DH90 116 aa11.31□□□□□ -0.6
CDH1-201ENST00000261769 TDGF1P3P51864 188 aa11.31□□□□□ -0.6
CDH1-201ENST00000261769 DTX2Q86UW9 622 aa11.31□□□□□ -0.6
CDH1-201ENST00000261769 MCRIP2Q9BUT9 160 aaKnown RBP11.31□□□□□ -0.6
CDH1-201ENST00000261769 RPP21Q9H633 154 aaKnown RBP11.31□□□□□ -0.6
CDH1-201ENST00000261769 HIVEP2P31629 2446 aa11.31□□□□□ -0.6
CDH1-201ENST00000261769 PLXND1Q9Y4D7 1925 aa11.31□□□□□ -0.6
CDH1-201ENST00000261769 M0R143 59 aa11.31□□□□□ -0.6
CDH1-201ENST00000261769 OR5AN1Q8NGI8 311 aa11.31□□□□□ -0.6
CDH1-201ENST00000261769 TBX15Q96SF7 602 aa11.31□□□□□ -0.6
CDH1-201ENST00000261769 MRPL18Q9H0U6 180 aaKnown RBP11.31□□□□□ -0.6
CDH1-201ENST00000261769 TRGV4A0A0C4DH28 118 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 J3QR89 54 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 MUC21Q5SSG8 566 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 PSG8Q9UQ74 426 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 LRRK1Q38SD2 2015 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 TRAV3A0A0B4J244 114 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 SCO2A0A1W2PP80 73 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 FBXL19-AS1Q494R0 122 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 FGF16O43320 207 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 ZNF688P0C7X2 276 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 C21orf62-AS1Q17RA5 79 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 WDR86Q86TI4 376 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 VN1R17PQ8TDU5 208 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 NDUFS7O75251 213 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 IGKV1-16P04430 117 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 PYYP10082 97 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 CFPP27918 469 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 ATP5G3P48201 142 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 OR10AG1Q8NH19 301 aa11.3□□□□□ -0.6
CDH1-201ENST00000261769 GRIFINA4D1Z8 144 aa11.29□□□□□ -0.6
CDH1-201ENST00000261769 HS3ST6Q96QI5 342 aa11.29□□□□□ -0.6
CDH1-201ENST00000261769 RHPN1-AS1Q9BWJ2 59 aa11.29□□□□□ -0.6
CDH1-201ENST00000261769 VAMP3Q15836 100 aa11.29□□□□□ -0.6
CDH1-201ENST00000261769 RSPO1Q2MKA7 263 aaPredicted RBP11.29□□□□□ -0.6
CDH1-201ENST00000261769 LY6G6FQ5SQ64 297 aa11.29□□□□□ -0.6
CDH1-201ENST00000261769 GGTLC1Q9BX51 225 aa11.29□□□□□ -0.6
CDH1-201ENST00000261769 ATRXP46100 2492 aa11.29□□□□□ -0.6
CDH1-201ENST00000261769 ATP6V0E1O15342 81 aa11.29□□□□□ -0.6
CDH1-201ENST00000261769 CCL20P78556 96 aa11.29□□□□□ -0.6
CDH1-201ENST00000261769 SLC25A39Q9BZJ4 359 aaPredicted RBP11.29□□□□□ -0.6
CDH1-201ENST00000261769 CSPG4Q6UVK1 2322 aa11.29□□□□□ -0.6
CDH1-201ENST00000261769 ZNF98A6NK75 572 aa11.29□□□□□ -0.6
CDH1-201ENST00000261769 LEPROTL1O95214 131 aa11.29□□□□□ -0.6
CDH1-201ENST00000261769 SYNJ2BPP57105 145 aa11.29□□□□□ -0.6
CDH1-201ENST00000261769 OVOL3O00110 214 aa11.28□□□□□ -0.6
CDH1-201ENST00000261769 IGHV2-70P01814 119 aa11.28□□□□□ -0.6
CDH1-201ENST00000261769 SUPT4H1P63272 117 aaKnown RBP11.28□□□□□ -0.6
CDH1-201ENST00000261769 MYLKQ15746 1914 aa11.28□□□□□ -0.6
CDH1-201ENST00000261769 PSMB2P49721 201 aa11.28□□□□□ -0.6
CDH1-201ENST00000261769 RPL15P61313 204 aaKnown RBP11.28□□□□□ -0.6
CDH1-201ENST00000261769 CIRBPQ14011 172 aaKnown RBP11.28□□□□□ -0.6
CDH1-201ENST00000261769 TMEM14EPQ6UXP3 125 aa11.28□□□□□ -0.6
CDH1-201ENST00000261769 TMEM70Q9BUB7 260 aa11.28□□□□□ -0.6
CDH1-201ENST00000261769 ZNF581Q9P0T4 197 aa11.28□□□□□ -0.6
CDH1-201ENST00000261769 LINC01619G3V211 115 aa11.28□□□□□ -0.6
CDH1-201ENST00000261769 TMEM249Q2WGJ8 235 aa11.28□□□□□ -0.6
CDH1-201ENST00000261769 TP53BP1Q12888 1972 aaPredicted RBP11.28□□□□□ -0.6
CDH1-201ENST00000261769 PMS2P5A8MQ11 134 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms