RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 HYPMO75409 117 aa13.71□□□□□ -0.21
FOXA1-201ENST00000250448 CA1P00915 261 aaPredicted RBP13.71□□□□□ -0.21
FOXA1-201ENST00000250448 FAM19A2Q8N3H0 131 aa13.71□□□□□ -0.21
FOXA1-201ENST00000250448 NHLRC2Q8NBF2 726 aa13.71□□□□□ -0.21
FOXA1-201ENST00000250448 BBC3Q96PG8 261 aaPredicted RBP13.71□□□□□ -0.21
FOXA1-201ENST00000250448 MRPL32Q9BYC8 188 aaKnown RBP13.71□□□□□ -0.21
FOXA1-201ENST00000250448 ZNF331Q9NQX6 463 aaPredicted RBP13.71□□□□□ -0.21
FOXA1-201ENST00000250448 ZFP30Q9Y2G7 519 aa13.71□□□□□ -0.21
FOXA1-201ENST00000250448 TEX50A0A1B0GTY4 177 aa13.71□□□□□ -0.22
FOXA1-201ENST00000250448 RNASE2P10153 161 aaKnown RBP13.71□□□□□ -0.22
FOXA1-201ENST00000250448 C19orf35Q6ZS72 473 aa13.71□□□□□ -0.22
FOXA1-201ENST00000250448 TXN2Q99757 166 aa13.71□□□□□ -0.22
FOXA1-201ENST00000250448 C19orf84I3L1E1 186 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 NTF3P20783 257 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 HNRNPA3P51991 378 aaKnown RBP13.7□□□□□ -0.22
FOXA1-201ENST00000250448 ATP5IP56385 69 aaPredicted RBP13.7□□□□□ -0.22
FOXA1-201ENST00000250448 UBE2L3P68036 154 aaKnown RBP13.7□□□□□ -0.22
FOXA1-201ENST00000250448 MLANAQ16655 118 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 MUC15Q8N387 334 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 C11orf42Q8N5U0 333 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 OR1L8Q8NGR8 309 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 YLPM1P49750 1951 aaKnown RBP13.7□□□□□ -0.22
FOXA1-201ENST00000250448 SERTM2A0A1B0GWG4 89 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 TNFRSF1AP19438 455 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 LOXP28300 417 aaPredicted RBP13.7□□□□□ -0.22
FOXA1-201ENST00000250448 CD69Q07108 199 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 SLAQ13239 276 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 Q6ZN92 141 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 C18orf32Q8TCD1 76 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 FAM167A-AS1Q96KT0 104 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 SLC25A2Q9BXI2 301 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 MRPL27Q9P0M9 148 aaKnown RBP13.7□□□□□ -0.22
FOXA1-201ENST00000250448 TNCP24821 2201 aa13.7□□□□□ -0.22
FOXA1-201ENST00000250448 SRRM4A7MD48 611 aaKnown RBP13.69□□□□□ -0.22
FOXA1-201ENST00000250448 IGKV1-16P04430 117 aa13.69□□□□□ -0.22
FOXA1-201ENST00000250448 BORCS7Q96B45 105 aa13.69□□□□□ -0.22
FOXA1-201ENST00000250448 SSBP3Q9BWW4 388 aaPredicted RBP13.69□□□□□ -0.22
FOXA1-201ENST00000250448 TRAV5A0A0B4J249 113 aa13.69□□□□□ -0.22
FOXA1-201ENST00000250448 LY6HO94772 140 aa13.69□□□□□ -0.22
FOXA1-201ENST00000250448 CT45A6P0DMU7 189 aa13.69□□□□□ -0.22
FOXA1-201ENST00000250448 CT45A5P0DMU8 189 aa13.69□□□□□ -0.22
FOXA1-201ENST00000250448 CT45A7P0DMV0 189 aa13.69□□□□□ -0.22
FOXA1-201ENST00000250448 MORN5Q5VZ52 161 aa13.69□□□□□ -0.22
FOXA1-201ENST00000250448 WIPF2Q8TF74 440 aaPredicted RBP13.69□□□□□ -0.22
FOXA1-201ENST00000250448 FAM168AQ92567 244 aa13.69□□□□□ -0.22
FOXA1-201ENST00000250448 WNT10AQ9GZT5 417 aa13.69□□□□□ -0.22
FOXA1-201ENST00000250448 ZNF672Q499Z4 452 aaPredicted RBP13.69□□□□□ -0.22
FOXA1-201ENST00000250448 STUMQ69YW2 141 aa13.69□□□□□ -0.22
FOXA1-201ENST00000250448 PPIAL4AQ9Y536 164 aa13.69□□□□□ -0.22
FOXA1-201ENST00000250448 PSMB11A5LHX3 300 aa13.68□□□□□ -0.22
FOXA1-201ENST00000250448 SAA1P0DJI8 122 aaPredicted RBP13.68□□□□□ -0.22
FOXA1-201ENST00000250448 RASL11AQ6T310 242 aa13.68□□□□□ -0.22
FOXA1-201ENST00000250448 STPG4Q8N801 248 aa13.68□□□□□ -0.22
FOXA1-201ENST00000250448 OR5B3Q8NH48 314 aa13.68□□□□□ -0.22
FOXA1-201ENST00000250448 FAM222BQ8WU58 562 aa13.68□□□□□ -0.22
FOXA1-201ENST00000250448 MBD6Q96DN6 1003 aa13.68□□□□□ -0.22
FOXA1-201ENST00000250448 GAFA1Q96PS6 74 aa13.68□□□□□ -0.22
FOXA1-201ENST00000250448 A0A1W2PPR1 153 aa13.68□□□□□ -0.22
FOXA1-201ENST00000250448 ASPHD1Q5U4P2 390 aa13.68□□□□□ -0.22
FOXA1-201ENST00000250448 KLHDC1Q8N7A1 406 aa13.68□□□□□ -0.22
FOXA1-201ENST00000250448 LINC00479Q96M42 142 aa13.68□□□□□ -0.22
FOXA1-201ENST00000250448 ZNF714Q96N38 554 aa13.68□□□□□ -0.22
FOXA1-201ENST00000250448 BET1LQ9NYM9 111 aa13.68□□□□□ -0.22
FOXA1-201ENST00000250448 LAMTOR2Q9Y2Q5 125 aa13.68□□□□□ -0.22
FOXA1-201ENST00000250448 FAM231DQ6ZW35 169 aa13.67□□□□□ -0.22
FOXA1-201ENST00000250448 OR10W1Q8NGF6 305 aa13.67□□□□□ -0.22
FOXA1-201ENST00000250448 DNAJC4Q9NNZ3 241 aa13.67□□□□□ -0.22
FOXA1-201ENST00000250448 B9A039 149 aa13.67□□□□□ -0.22
FOXA1-201ENST00000250448 J3KRW8 73 aa13.67□□□□□ -0.22
FOXA1-201ENST00000250448 SLC25A48Q6ZT89 311 aaKnown RBP13.67□□□□□ -0.22
FOXA1-201ENST00000250448 CRYBG3Q68DQ2 2970 aa13.67□□□□□ -0.22
FOXA1-201ENST00000250448 SLC25A17O43808 307 aa13.66□□□□□ -0.22
FOXA1-201ENST00000250448 MFAP2P55001 183 aa13.66□□□□□ -0.22
FOXA1-201ENST00000250448 ATOH7Q8N100 152 aa13.66□□□□□ -0.22
FOXA1-201ENST00000250448 GRAMD2BQ96HH9 432 aa13.66□□□□□ -0.22
FOXA1-201ENST00000250448 ZNF355PQ9NSJ1 428 aa13.66□□□□□ -0.22
FOXA1-201ENST00000250448 ZNRD1Q9P1U0 126 aa13.66□□□□□ -0.22
FOXA1-201ENST00000250448 AMMECR1Q9Y4X0 333 aaPredicted RBP13.66□□□□□ -0.22
FOXA1-201ENST00000250448 TMEM178BH3BS89 294 aa13.66□□□□□ -0.22
FOXA1-201ENST00000250448 NDUFB8O95169 186 aa13.66□□□□□ -0.22
FOXA1-201ENST00000250448 LYPD2Q6UXB3 125 aa13.66□□□□□ -0.22
FOXA1-201ENST00000250448 CLEC7AQ9BXN2 247 aa13.66□□□□□ -0.22
FOXA1-201ENST00000250448 TRAV34A0A0B4J273 112 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 PYYP10082 97 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 GDF5OSQ5U4N7 250 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 OR2T6Q8NHC8 308 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 CACNG8Q8WXS5 425 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 RPUSD1Q9UJJ7 312 aaKnown RBP13.65□□□□□ -0.22
FOXA1-201ENST00000250448 PEX7O00628 323 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 FCN3O75636 299 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 PMCHL1Q16048 86 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 TMEM30BQ3MIR4 351 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 LCN12Q6JVE5 192 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 ZNF329Q86UD4 541 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 NUP35Q8NFH5 326 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 COX7A2P2O60397 106 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 HSBP1O75506 76 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 TNXAQ16473 311 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 ZNF788Q6ZQV5 615 aa13.65□□□□□ -0.22
FOXA1-201ENST00000250448 PAXXQ9BUH6 204 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms