RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 IGHG3P01860 377 aa14.29□□□□□ -0.12
CDKN1B-201ENST00000228872 LINC00322Q6ZN03 302 aaPredicted RBP14.29□□□□□ -0.12
CDKN1B-201ENST00000228872 A8MWL6 223 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 TIMM8AO60220 97 aaPredicted RBP14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 FXYD5Q96DB9 178 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 NDFIP1Q9BT67 221 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 SCNM1Q9BWG6 230 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 CALYQ9NYX4 217 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 TEX50A0A1B0GTY4 177 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 C9orf118A6NHY6 69 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 MGST3O14880 152 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 UQCRFS1P47985 274 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 LHFPL4Q7Z7J7 247 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 OR1L8Q8NGR8 309 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 PRSS22Q9GZN4 317 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 FZR1Q9UM11 496 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 DSPP15924 2871 aaKnown RBP14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 MYCNOSP40205 109 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 ATP5IP56385 69 aaPredicted RBP14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 SSBP2P81877 361 aaPredicted RBP14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 TMUB1Q9BVT8 246 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 EPDR1Q9UM22 224 aa14.28□□□□□ -0.12
CDKN1B-201ENST00000228872 LAMA5O15230 3695 aa14.27□□□□□ -0.12
CDKN1B-201ENST00000228872 H3BRM9 83 aa14.27□□□□□ -0.12
CDKN1B-201ENST00000228872 CT83Q5H943 113 aa14.27□□□□□ -0.12
CDKN1B-201ENST00000228872 C10orf113Q5VZT2 155 aa14.27□□□□□ -0.12
CDKN1B-201ENST00000228872 PATE2Q6UY27 113 aa14.27□□□□□ -0.12
CDKN1B-201ENST00000228872 ZADH2Q8N4Q0 377 aa14.27□□□□□ -0.12
CDKN1B-201ENST00000228872 C5orf17Q8NAS9 161 aa14.27□□□□□ -0.12
CDKN1B-201ENST00000228872 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.27□□□□□ -0.12
CDKN1B-201ENST00000228872 AP1S3Q96PC3 154 aa14.27□□□□□ -0.12
CDKN1B-201ENST00000228872 K7EP34 96 aa14.27□□□□□ -0.13
CDKN1B-201ENST00000228872 GPR82Q96P67 336 aa14.27□□□□□ -0.13
CDKN1B-201ENST00000228872 MLST8Q9BVC4 326 aa14.27□□□□□ -0.13
CDKN1B-201ENST00000228872 SELENOKQ9Y6D0 94 aa14.27□□□□□ -0.13
CDKN1B-201ENST00000228872 SLC25A5P05141 298 aaKnown RBP14.26□□□□□ -0.13
CDKN1B-201ENST00000228872 IGHV1-2P23083 117 aa14.26□□□□□ -0.13
CDKN1B-201ENST00000228872 TIMM8BQ9Y5J9 83 aaPredicted RBP14.26□□□□□ -0.13
CDKN1B-201ENST00000228872 CHEK1O14757 476 aa14.26□□□□□ -0.13
CDKN1B-201ENST00000228872 LYZL6O75951 148 aa14.26□□□□□ -0.13
CDKN1B-201ENST00000228872 MOSP00540 346 aa14.26□□□□□ -0.13
CDKN1B-201ENST00000228872 P01737 135 aa14.26□□□□□ -0.13
CDKN1B-201ENST00000228872 RBPMS2Q6ZRY4 209 aaKnown RBP14.26□□□□□ -0.13
CDKN1B-201ENST00000228872 ADTRPQ96IZ2 230 aa14.26□□□□□ -0.13
CDKN1B-201ENST00000228872 KLF12Q9Y4X4 402 aa14.26□□□□□ -0.13
CDKN1B-201ENST00000228872 C19orf71A6NCJ1 209 aa14.25□□□□□ -0.13
CDKN1B-201ENST00000228872 SRRM4A7MD48 611 aaKnown RBP14.25□□□□□ -0.13
CDKN1B-201ENST00000228872 FGF6P10767 208 aa14.25□□□□□ -0.13
CDKN1B-201ENST00000228872 NEGR1Q7Z3B1 354 aa14.25□□□□□ -0.13
CDKN1B-201ENST00000228872 OR10W1Q8NGF6 305 aa14.25□□□□□ -0.13
CDKN1B-201ENST00000228872 OR1L4Q8NGR5 311 aa14.25□□□□□ -0.13
CDKN1B-201ENST00000228872 PPP1R35Q8TAP8 253 aa14.25□□□□□ -0.13
CDKN1B-201ENST00000228872 MSRB2Q9Y3D2 182 aa14.25□□□□□ -0.13
CDKN1B-201ENST00000228872 AKAP13Q12802 2813 aa14.25□□□□□ -0.13
CDKN1B-201ENST00000228872 H3BUT2 72 aa14.25□□□□□ -0.13
CDKN1B-201ENST00000228872 FSTL3O95633 263 aa14.25□□□□□ -0.13
CDKN1B-201ENST00000228872 TMEM177Q53S58 311 aa14.25□□□□□ -0.13
CDKN1B-201ENST00000228872 CACNG8Q8WXS5 425 aa14.25□□□□□ -0.13
CDKN1B-201ENST00000228872 PTPRZ1P23471 2315 aaPredicted RBP14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 IGHV3OR15-7A0A075B7D8 119 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 C17orf58Q2M2W7 97 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 TEX45Q8NA69 505 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 ZNRF1Q8ND25 227 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 NEU4Q8WWR8 484 aaPredicted RBP14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 ZNF492Q9P255 531 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 A6NDN8 102 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 DLL1O00548 723 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 NCR2O95944 276 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 CSN3P07498 182 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 CGB3P0DN86 165 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 CGB7P0DN87 165 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 FABP6P51161 128 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 PDPNQ86YL7 162 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 ITLN1Q8WWA0 313 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 NAA38Q9BRA0 125 aaKnown RBP14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 GFRA4Q9GZZ7 299 aa14.24□□□□□ -0.13
CDKN1B-201ENST00000228872 PLAUP00749 431 aa14.23□□□□□ -0.13
CDKN1B-201ENST00000228872 C1orf185Q5T7R7 199 aa14.23□□□□□ -0.13
CDKN1B-201ENST00000228872 ZNF747Q9BV97 191 aa14.23□□□□□ -0.13
CDKN1B-201ENST00000228872 PGPA6NDG6 321 aa14.23□□□□□ -0.13
CDKN1B-201ENST00000228872 SRRM5B3KS81 715 aa14.23□□□□□ -0.13
CDKN1B-201ENST00000228872 IGKV1-16P04430 117 aa14.23□□□□□ -0.13
CDKN1B-201ENST00000228872 FAM87AP0C7U9 286 aa14.23□□□□□ -0.13
CDKN1B-201ENST00000228872 RBPJQ06330 500 aa14.23□□□□□ -0.13
CDKN1B-201ENST00000228872 INO80CQ6PI98 192 aaPredicted RBP14.23□□□□□ -0.13
CDKN1B-201ENST00000228872 RABAC1Q9UI14 185 aa14.23□□□□□ -0.13
CDKN1B-201ENST00000228872 AGFG2O95081 481 aa14.22□□□□□ -0.13
CDKN1B-201ENST00000228872 Q6ZS92 163 aa14.22□□□□□ -0.13
CDKN1B-201ENST00000228872 OR2K2Q8NGT1 345 aa14.22□□□□□ -0.13
CDKN1B-201ENST00000228872 OR10AG1Q8NH19 301 aa14.22□□□□□ -0.13
CDKN1B-201ENST00000228872 SVILO95425 2214 aa14.22□□□□□ -0.13
CDKN1B-201ENST00000228872 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.22□□□□□ -0.13
CDKN1B-201ENST00000228872 KIR3DS1Q14943 382 aa14.22□□□□□ -0.13
CDKN1B-201ENST00000228872 OR1N2Q8NGR9 330 aa14.22□□□□□ -0.13
CDKN1B-201ENST00000228872 BLNKQ8WV28 456 aa14.22□□□□□ -0.13
CDKN1B-201ENST00000228872 A0A0G2JLM5 398 aa14.21□□□□□ -0.13
CDKN1B-201ENST00000228872 LGALS7P47929 136 aa14.21□□□□□ -0.13
CDKN1B-201ENST00000228872 GCSAMQ8N6F7 178 aa14.21□□□□□ -0.13
CDKN1B-201ENST00000228872 DKK4Q9UBT3 224 aa14.21□□□□□ -0.13
CDKN1B-201ENST00000228872 HILPDAQ9Y5L2 63 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms