RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 ORM2P19652 201 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 CD81P60033 236 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 RHOGP84095 191 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 Q56UQ5 140 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 CYB561D1Q8N8Q1 229 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 OR1B1Q8NGR6 318 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 FAM167A-AS1Q96KT0 104 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 TXNDC17Q9BRA2 123 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 TMEM167BQ9NRX6 74 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 ZNF355PQ9NSJ1 428 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 AP4M1O00189 453 aa13.12□□□□□ -0.31
TVP23C-201ENST00000225576 SNAPINO95295 136 aa13.12□□□□□ -0.31
TVP23C-201ENST00000225576 C15orf32Q32M92 178 aa13.12□□□□□ -0.31
TVP23C-201ENST00000225576 OR51G1Q8NGK1 321 aa13.12□□□□□ -0.31
TVP23C-201ENST00000225576 SUN5Q8TC36 379 aa13.12□□□□□ -0.31
TVP23C-201ENST00000225576 ZNF503Q96F45 646 aa13.12□□□□□ -0.31
TVP23C-201ENST00000225576 VPREB3Q9UKI3 123 aa13.12□□□□□ -0.31
TVP23C-201ENST00000225576 S4R3C0 116 aa13.12□□□□□ -0.31
TVP23C-201ENST00000225576 ARL2-SNX15V9GYD0 113 aa13.12□□□□□ -0.31
TVP23C-201ENST00000225576 TMEM250H0YL14 139 aa13.11□□□□□ -0.31
TVP23C-201ENST00000225576 H3BUA1 57 aa13.11□□□□□ -0.31
TVP23C-201ENST00000225576 CD5LO43866 347 aa13.11□□□□□ -0.31
TVP23C-201ENST00000225576 PPIFP30405 207 aaKnown RBP13.11□□□□□ -0.31
TVP23C-201ENST00000225576 MORN5Q5VZ52 161 aa13.11□□□□□ -0.31
TVP23C-201ENST00000225576 ATRAIDQ6UW56 229 aa13.11□□□□□ -0.31
TVP23C-201ENST00000225576 LINC00305Q7Z4B0 112 aa13.11□□□□□ -0.31
TVP23C-201ENST00000225576 ZNF502Q8TBZ5 544 aa13.11□□□□□ -0.31
TVP23C-201ENST00000225576 SLC25A2Q9BXI2 301 aa13.11□□□□□ -0.31
TVP23C-201ENST00000225576 GAR1Q9NY12 217 aaKnown RBP13.11□□□□□ -0.31
TVP23C-201ENST00000225576 C11orf94C9JXX5 98 aa13.1□□□□□ -0.31
TVP23C-201ENST00000225576 OR7C2O60412 319 aa13.1□□□□□ -0.31
TVP23C-201ENST00000225576 SCO1O75880 301 aa13.1□□□□□ -0.31
TVP23C-201ENST00000225576 KRTAP1-1Q07627 177 aa13.1□□□□□ -0.31
TVP23C-201ENST00000225576 FAM90A2PQ658T7 463 aa13.1□□□□□ -0.31
TVP23C-201ENST00000225576 STXBP6Q8NFX7 210 aa13.1□□□□□ -0.31
TVP23C-201ENST00000225576 UHRF2Q96PU4 802 aa13.1□□□□□ -0.31
TVP23C-201ENST00000225576 ATP6V0BQ99437 205 aa13.1□□□□□ -0.31
TVP23C-201ENST00000225576 NKX6-2Q9C056 277 aaPredicted RBP13.1□□□□□ -0.31
TVP23C-201ENST00000225576 MRPL27Q9P0M9 148 aaKnown RBP13.1□□□□□ -0.31
TVP23C-201ENST00000225576 HIGD1AQ9Y241 93 aa13.1□□□□□ -0.31
TVP23C-201ENST00000225576 TRAV5A0A0B4J249 113 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 WI2-2373I1.2A0A1W2PRP0 233 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 FAM223BA6NKX1 122 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 CTSGP08311 255 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 LYZP61626 148 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 Q6ZS46 218 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 FAM223AQ8IWN6 122 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 ZNF491Q8N8L2 437 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 OR5AU1Q8NGC0 362 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 OR4F5Q8NH21 305 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 Q8WTZ3 238 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 EEF1AKMT3Q96AZ1 226 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 OR4F4Q96R69 305 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 LINC00527Q9UJ94 153 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 CSPG4Q6UVK1 2322 aa13.09□□□□□ -0.31
TVP23C-201ENST00000225576 TRBV7-1A0A0A6YYK4 115 aa13.08□□□□□ -0.31
TVP23C-201ENST00000225576 PDE6DO43924 150 aa13.08□□□□□ -0.31
TVP23C-201ENST00000225576 OR2C1O95371 312 aa13.08□□□□□ -0.31
TVP23C-201ENST00000225576 CEBPGP53567 150 aa13.08□□□□□ -0.31
TVP23C-201ENST00000225576 UBE2G2P60604 165 aa13.08□□□□□ -0.31
TVP23C-201ENST00000225576 ATP5G2Q06055 141 aa13.08□□□□□ -0.31
TVP23C-201ENST00000225576 CST9LP1Q5W188 147 aa13.08□□□□□ -0.31
TVP23C-201ENST00000225576 CLRN3Q8NCR9 226 aa13.08□□□□□ -0.31
TVP23C-201ENST00000225576 MS4A10Q96PG2 267 aa13.08□□□□□ -0.31
TVP23C-201ENST00000225576 VPS13CQ709C8 3753 aa13.08□□□□□ -0.32
TVP23C-201ENST00000225576 OR2T8A6NH00 312 aa13.08□□□□□ -0.32
TVP23C-201ENST00000225576 FAM74A7A6NL05 159 aa13.08□□□□□ -0.32
TVP23C-201ENST00000225576 NUPL2O15504 423 aaKnown RBP13.08□□□□□ -0.32
TVP23C-201ENST00000225576 HOXA3O43365 443 aaPredicted RBP13.08□□□□□ -0.32
TVP23C-201ENST00000225576 IGHV3-23P01764 117 aa13.08□□□□□ -0.32
TVP23C-201ENST00000225576 RNF125Q96EQ8 232 aa13.08□□□□□ -0.32
TVP23C-201ENST00000225576 NOL4LQ96MY1 436 aaPredicted RBP13.08□□□□□ -0.32
TVP23C-201ENST00000225576 PAXXQ9BUH6 204 aa13.08□□□□□ -0.32
TVP23C-201ENST00000225576 OR51M1Q9H341 326 aa13.08□□□□□ -0.32
TVP23C-201ENST00000225576 F6UZH7 168 aa13.07□□□□□ -0.32
TVP23C-201ENST00000225576 TRGV3P03979 118 aa13.07□□□□□ -0.32
TVP23C-201ENST00000225576 ADMP35318 185 aa13.07□□□□□ -0.32
TVP23C-201ENST00000225576 ATP5G3P48201 142 aa13.07□□□□□ -0.32
TVP23C-201ENST00000225576 CFHR3Q02985 330 aa13.07□□□□□ -0.32
TVP23C-201ENST00000225576 S100A7AQ86SG5 101 aa13.07□□□□□ -0.32
TVP23C-201ENST00000225576 SLC25A39Q9BZJ4 359 aaPredicted RBP13.07□□□□□ -0.32
TVP23C-201ENST00000225576 YTHDF2Q9Y5A9 579 aaKnown RBP13.07□□□□□ -0.32
TVP23C-201ENST00000225576 H3BQ15 152 aa13.06□□□□□ -0.32
TVP23C-201ENST00000225576 IGLV1-40P01703 118 aa13.06□□□□□ -0.32
TVP23C-201ENST00000225576 IL4P05112 153 aa13.06□□□□□ -0.32
TVP23C-201ENST00000225576 CLEC3BP05452 202 aa13.06□□□□□ -0.32
TVP23C-201ENST00000225576 OR10J4P0C629 311 aa13.06□□□□□ -0.32
TVP23C-201ENST00000225576 SRP14P37108 136 aaKnown RBP13.06□□□□□ -0.32
TVP23C-201ENST00000225576 FAM74A3Q4VXF1 159 aa13.06□□□□□ -0.32
TVP23C-201ENST00000225576 TMEM86BQ8N661 226 aa13.06□□□□□ -0.32
TVP23C-201ENST00000225576 SIGLECL1Q8N7X8 197 aa13.06□□□□□ -0.32
TVP23C-201ENST00000225576 USMG5Q96IX5 58 aa13.06□□□□□ -0.32
TVP23C-201ENST00000225576 CCDC140Q96MF4 163 aa13.06□□□□□ -0.32
TVP23C-201ENST00000225576 NIPSNAP3BQ9BS92 247 aa13.06□□□□□ -0.32
TVP23C-201ENST00000225576 CHRDL1Q9BU40 450 aa13.06□□□□□ -0.32
TVP23C-201ENST00000225576 PUS1Q9Y606 427 aaKnown RBP eCLIP13.06□□□□□ -0.32
TVP23C-201ENST00000225576 A0A1W2PRE2 83 aa13.05□□□□□ -0.32
TVP23C-201ENST00000225576 GPR183P32249 361 aa13.05□□□□□ -0.32
TVP23C-201ENST00000225576 UBE2L3P68036 154 aaKnown RBP13.05□□□□□ -0.32
TVP23C-201ENST00000225576 SHANK2-AS3Q9BTD1 123 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms