RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 ZNF546Q86UE3 836 aa20.23■□□□□ 0.83
STUB1-201ENST00000219548 LSM4Q9Y4Z0 139 aaKnown RBP20.23■□□□□ 0.83
STUB1-201ENST00000219548 SELENOKQ9Y6D0 94 aa20.23■□□□□ 0.83
STUB1-201ENST00000219548 CBLN1P23435 193 aa20.22■□□□□ 0.83
STUB1-201ENST00000219548 SAMD5Q5TGI4 173 aa20.22■□□□□ 0.83
STUB1-201ENST00000219548 GINS3Q9BRX5 216 aa20.22■□□□□ 0.83
STUB1-201ENST00000219548 SORL1Q92673 2214 aa20.21■□□□□ 0.83
STUB1-201ENST00000219548 IGHV3-49A0A0A0MS15 119 aa20.21■□□□□ 0.83
STUB1-201ENST00000219548 FABP1P07148 127 aa20.21■□□□□ 0.83
STUB1-201ENST00000219548 NUP62P37198 522 aaPredicted RBP20.21■□□□□ 0.83
STUB1-201ENST00000219548 CYP2G1PQ6ZSU1 146 aa20.21■□□□□ 0.83
STUB1-201ENST00000219548 OR51G1Q8NGK1 321 aa20.21■□□□□ 0.83
STUB1-201ENST00000219548 AQP10Q96PS8 301 aa20.21■□□□□ 0.83
STUB1-201ENST00000219548 MGST2Q99735 147 aa20.21■□□□□ 0.83
STUB1-201ENST00000219548 TNFSF18Q9UNG2 199 aa20.21■□□□□ 0.83
STUB1-201ENST00000219548 WDR83OSQ9Y284 106 aa20.21■□□□□ 0.83
STUB1-201ENST00000219548 K7EMT4 169 aa20.2■□□□□ 0.82
STUB1-201ENST00000219548 USF2Q15853 346 aaPredicted RBP20.2■□□□□ 0.82
STUB1-201ENST00000219548 IGHV3OR16-13A0A075B7E8 117 aa20.19■□□□□ 0.82
STUB1-201ENST00000219548 IGHV3-74A0A0B4J1X5 117 aa20.19■□□□□ 0.82
STUB1-201ENST00000219548 RNF222A6NCQ9 220 aa20.19■□□□□ 0.82
STUB1-201ENST00000219548 AGPAT2O15120 278 aa20.19■□□□□ 0.82
STUB1-201ENST00000219548 INO80EQ8NBZ0 244 aaPredicted RBP20.19■□□□□ 0.82
STUB1-201ENST00000219548 RNF125Q96EQ8 232 aa20.19■□□□□ 0.82
STUB1-201ENST00000219548 PBDC1Q9BVG4 233 aa20.19■□□□□ 0.82
STUB1-201ENST00000219548 SIGLEC8Q9NYZ4 499 aa20.19■□□□□ 0.82
STUB1-201ENST00000219548 DNAH3Q8TD57 4116 aa20.19■□□□□ 0.82
STUB1-201ENST00000219548 FGF7P21781 194 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 INSL3P51460 131 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 LYZP61626 148 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 BTNL8Q6UX41 500 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 DYNLRB2Q8TF09 96 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 ATP5SQ99766 215 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 GPR61Q9BZJ8 451 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 MRPL27Q9P0M9 148 aaKnown RBP20.18■□□□□ 0.82
STUB1-201ENST00000219548 FBXL17Q9UF56 701 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 IGHV7-4-1A0A0J9YVY3 117 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 WI2-2373I1.2A0A1W2PRP0 233 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 ARPC5O15511 151 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 APOHP02749 345 aaPredicted RBP20.18■□□□□ 0.82
STUB1-201ENST00000219548 C8orf88P0DMB2 117 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 AP2S1P53680 142 aaPredicted RBP20.18■□□□□ 0.82
STUB1-201ENST00000219548 AKAP14Q86UN6 197 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 BPIFCQ8NFQ6 507 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 OR11H4Q8NGC9 324 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 MARC2Q969Z3 335 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 METTL26Q96S19 204 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 WFDC1Q9HC57 220 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 MLXQ9UH92 298 aa20.18■□□□□ 0.82
STUB1-201ENST00000219548 WIPF1O43516 503 aa20.17■□□□□ 0.82
STUB1-201ENST00000219548 IGLV1-51P01701 117 aa20.17■□□□□ 0.82
STUB1-201ENST00000219548 IGHV3-66A0A0C4DH42 116 aa20.16■□□□□ 0.82
STUB1-201ENST00000219548 CAMLGP49069 296 aa20.16■□□□□ 0.82
STUB1-201ENST00000219548 TCTE3Q8IZS6 198 aa20.16■□□□□ 0.82
STUB1-201ENST00000219548 GGTLC1Q9BX51 225 aa20.16■□□□□ 0.82
STUB1-201ENST00000219548 SMPXQ9UHP9 88 aa20.16■□□□□ 0.82
STUB1-201ENST00000219548 SLC45A2Q9UMX9 530 aa20.16■□□□□ 0.82
STUB1-201ENST00000219548 DFFBO76075 338 aa20.15■□□□□ 0.82
STUB1-201ENST00000219548 LINC00869P0C866 280 aa20.15■□□□□ 0.82
STUB1-201ENST00000219548 NPPCP23582 126 aa20.15■□□□□ 0.82
STUB1-201ENST00000219548 SELENOTP62341 195 aa20.15■□□□□ 0.82
STUB1-201ENST00000219548 RHPN1-AS1Q9BWJ2 59 aa20.15■□□□□ 0.82
STUB1-201ENST00000219548 CHEK1O14757 476 aa20.14■□□□□ 0.81
STUB1-201ENST00000219548 CRYBB3P26998 211 aa20.14■□□□□ 0.81
STUB1-201ENST00000219548 CD300CQ08708 224 aa20.14■□□□□ 0.81
STUB1-201ENST00000219548 RAB31Q13636 194 aa20.14■□□□□ 0.81
STUB1-201ENST00000219548 ST8SIA2Q92186 375 aa20.14■□□□□ 0.81
STUB1-201ENST00000219548 WDR61Q9GZS3 305 aaKnown RBP20.14■□□□□ 0.81
STUB1-201ENST00000219548 DOK5Q9P104 306 aa20.14■□□□□ 0.81
STUB1-201ENST00000219548 RABAC1Q9UI14 185 aa20.14■□□□□ 0.81
STUB1-201ENST00000219548 DEFB114Q30KQ6 69 aa20.13■□□□□ 0.81
STUB1-201ENST00000219548 CD300EQ496F6 205 aaPredicted RBP20.13■□□□□ 0.81
STUB1-201ENST00000219548 NPCDR1Q9BY65 106 aa20.13■□□□□ 0.81
STUB1-201ENST00000219548 IZUMO1RA6ND01 250 aa20.12■□□□□ 0.81
STUB1-201ENST00000219548 CFDP00746 253 aaPredicted RBP20.12■□□□□ 0.81
STUB1-201ENST00000219548 HNRNPCP07910 306 aaKnown RBP eCLIP20.12■□□□□ 0.81
STUB1-201ENST00000219548 ORM2P19652 201 aa20.12■□□□□ 0.81
STUB1-201ENST00000219548 BEAN1Q3B7T3 259 aa20.12■□□□□ 0.81
STUB1-201ENST00000219548 MIC13Q5XKP0 118 aa20.12■□□□□ 0.81
STUB1-201ENST00000219548 OR1B1Q8NGR6 318 aa20.12■□□□□ 0.81
STUB1-201ENST00000219548 MFFQ9GZY8 342 aa20.12■□□□□ 0.81
STUB1-201ENST00000219548 TECRQ9NZ01 308 aaKnown RBP20.12■□□□□ 0.81
STUB1-201ENST00000219548 MPDU1O75352 247 aa20.11■□□□□ 0.81
STUB1-201ENST00000219548 OPCMLQ14982 345 aa20.11■□□□□ 0.81
STUB1-201ENST00000219548 RNF2Q99496 336 aa20.11■□□□□ 0.81
STUB1-201ENST00000219548 IFNA5P01569 189 aa20.11■□□□□ 0.81
STUB1-201ENST00000219548 EIF2B2P49770 351 aaKnown RBP20.11■□□□□ 0.81
STUB1-201ENST00000219548 KRTAP10-11P60412 298 aa20.11■□□□□ 0.81
STUB1-201ENST00000219548 STPG3Q8N7X2 389 aa20.11■□□□□ 0.81
STUB1-201ENST00000219548 ARL6Q9H0F7 186 aa20.11■□□□□ 0.81
STUB1-201ENST00000219548 VSIRQ9H7M9 311 aa20.11■□□□□ 0.81
STUB1-201ENST00000219548 U3KQE9 123 aa20.11■□□□□ 0.81
STUB1-201ENST00000219548 HMSDA8MTL9 139 aa20.1■□□□□ 0.81
STUB1-201ENST00000219548 EGFEM1PQ0D2K5 195 aa20.1■□□□□ 0.81
STUB1-201ENST00000219548 TMEM61Q8N0U2 210 aa20.1■□□□□ 0.81
STUB1-201ENST00000219548 PRR20EP86478 221 aa20.09■□□□□ 0.81
STUB1-201ENST00000219548 PRR20CP86479 221 aa20.09■□□□□ 0.81
STUB1-201ENST00000219548 PRR20DP86480 221 aa20.09■□□□□ 0.81
STUB1-201ENST00000219548 PRR20BP86481 221 aa20.09■□□□□ 0.81
STUB1-201ENST00000219548 PRR20AP86496 221 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms