RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 CFDP00746 253 aaPredicted RBP11.12□□□□□ -0.63
UPK3A-201ENST00000216211 P2RY1P47900 373 aa11.12□□□□□ -0.63
UPK3A-201ENST00000216211 APOC4P55056 127 aa11.12□□□□□ -0.63
UPK3A-201ENST00000216211 EWSR1Q01844 656 aaKnown RBP eCLIP11.12□□□□□ -0.63
UPK3A-201ENST00000216211 PMS2P11Q13670 270 aa11.12□□□□□ -0.63
UPK3A-201ENST00000216211 WFDC3Q8IUB2 231 aa11.12□□□□□ -0.63
UPK3A-201ENST00000216211 ZNF414Q96IQ9 312 aa11.12□□□□□ -0.63
UPK3A-201ENST00000216211 RCL1Q9Y2P8 373 aaKnown RBP11.12□□□□□ -0.63
UPK3A-201ENST00000216211 KMT2AQ03164 3969 aa11.11□□□□□ -0.63
UPK3A-201ENST00000216211 OR4C46A6NHA9 309 aa11.11□□□□□ -0.63
UPK3A-201ENST00000216211 K7EMT4 169 aa11.11□□□□□ -0.63
UPK3A-201ENST00000216211 TAAR5O14804 337 aa11.11□□□□□ -0.63
UPK3A-201ENST00000216211 SPRY2O43597 315 aa11.11□□□□□ -0.63
UPK3A-201ENST00000216211 CTSGP08311 255 aa11.11□□□□□ -0.63
UPK3A-201ENST00000216211 RPL35AP18077 110 aaKnown RBP11.11□□□□□ -0.63
UPK3A-201ENST00000216211 RPL12P30050 165 aaKnown RBP11.11□□□□□ -0.63
UPK3A-201ENST00000216211 AKR1C2P52895 323 aa11.11□□□□□ -0.63
UPK3A-201ENST00000216211 Q6ZRM9 215 aa11.11□□□□□ -0.63
UPK3A-201ENST00000216211 Q6ZWC4 215 aa11.11□□□□□ -0.63
UPK3A-201ENST00000216211 OR1P1Q8NH06 330 aa11.11□□□□□ -0.63
UPK3A-201ENST00000216211 OR4A16Q8NH70 328 aa11.11□□□□□ -0.63
UPK3A-201ENST00000216211 RNASE11Q8TAA1 199 aaKnown RBP11.11□□□□□ -0.63
UPK3A-201ENST00000216211 MISP3Q96FF7 219 aa11.11□□□□□ -0.63
UPK3A-201ENST00000216211 TP53TG1Q9Y2A0 90 aa11.11□□□□□ -0.63
UPK3A-201ENST00000216211 IGHV3-49A0A0A0MS15 119 aa11.1□□□□□ -0.63
UPK3A-201ENST00000216211 CXorf65A6NEN9 183 aa11.1□□□□□ -0.63
UPK3A-201ENST00000216211 C15orf62A8K5M9 175 aa11.1□□□□□ -0.63
UPK3A-201ENST00000216211 FAM90A26D6RGX4 464 aa11.1□□□□□ -0.63
UPK3A-201ENST00000216211 PVALBP20472 110 aaPredicted RBP11.1□□□□□ -0.63
UPK3A-201ENST00000216211 BMI1P35226 326 aa11.1□□□□□ -0.63
UPK3A-201ENST00000216211 TNFRSF9Q07011 255 aa11.1□□□□□ -0.63
UPK3A-201ENST00000216211 H2BFWTQ7Z2G1 175 aa11.1□□□□□ -0.63
UPK3A-201ENST00000216211 STOML3Q8TAV4 291 aa11.1□□□□□ -0.63
UPK3A-201ENST00000216211 RNF2Q99496 336 aa11.1□□□□□ -0.63
UPK3A-201ENST00000216211 CYTL1Q9NRR1 136 aa11.1□□□□□ -0.63
UPK3A-201ENST00000216211 CACNG5Q9UF02 275 aa11.1□□□□□ -0.63
UPK3A-201ENST00000216211 SMPXQ9UHP9 88 aa11.1□□□□□ -0.63
UPK3A-201ENST00000216211 FRAS1Q86XX4 4008 aa11.1□□□□□ -0.63
UPK3A-201ENST00000216211 IGHV7-4-1A0A0J9YVY3 117 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 I3L2K1 104 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 UBE2CO00762 179 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 CHEK1O14757 476 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 NUPL2O15504 423 aaKnown RBP11.09□□□□□ -0.63
UPK3A-201ENST00000216211 YIF1AO95070 293 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 MT-CO2P00403 227 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 IGHV3-48P01763 117 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 MFAP4P55083 255 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 POLR2GP62487 172 aaKnown RBP eCLIP11.09□□□□□ -0.63
UPK3A-201ENST00000216211 PRCDQ00LT1 54 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 RELQ04864 619 aaPredicted RBP11.09□□□□□ -0.63
UPK3A-201ENST00000216211 ZNF124Q15973 351 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 APRG1Q8IVJ8 170 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 STPG3Q8N7X2 389 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 TMEM116Q8NCL8 245 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 LINC00476Q8WZB0 136 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 ST8SIA2Q92186 375 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 RNF183Q96D59 192 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 RHPN1-AS1Q9BWJ2 59 aa11.09□□□□□ -0.63
UPK3A-201ENST00000216211 IGKV3-7A0A075B6H7 116 aa11.08□□□□□ -0.64
UPK3A-201ENST00000216211 KIR2DL5BA0A0G2JN68 375 aa11.08□□□□□ -0.64
UPK3A-201ENST00000216211 KIR2DL5BA0A0G2JPC4 375 aa11.08□□□□□ -0.64
UPK3A-201ENST00000216211 HTR2BP41595 481 aa11.08□□□□□ -0.64
UPK3A-201ENST00000216211 TFPI2P48307 235 aa11.08□□□□□ -0.64
UPK3A-201ENST00000216211 IZUMO4Q1ZYL8 232 aa11.08□□□□□ -0.64
UPK3A-201ENST00000216211 SPINK9Q5DT21 86 aa11.08□□□□□ -0.64
UPK3A-201ENST00000216211 KIR2DL5AQ8N109 375 aa11.08□□□□□ -0.64
UPK3A-201ENST00000216211 ZNF114Q8NC26 417 aa11.08□□□□□ -0.64
UPK3A-201ENST00000216211 KIR2DL5BQ8NHK3 375 aa11.08□□□□□ -0.64
UPK3A-201ENST00000216211 PINX1Q96BK5 328 aaKnown RBP11.08□□□□□ -0.64
UPK3A-201ENST00000216211 PHYHIPLQ96FC7 376 aa11.08□□□□□ -0.64
UPK3A-201ENST00000216211 RAB40CQ96S21 281 aa11.08□□□□□ -0.64
UPK3A-201ENST00000216211 ZNF471Q9BX82 626 aaPredicted RBP11.08□□□□□ -0.64
UPK3A-201ENST00000216211 MAP6D1Q9H9H5 199 aa11.08□□□□□ -0.64
UPK3A-201ENST00000216211 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.08□□□□□ -0.64
UPK3A-201ENST00000216211 IGHV3OR16-13A0A075B7E8 117 aa11.07□□□□□ -0.64
UPK3A-201ENST00000216211 IGHV3-74A0A0B4J1X5 117 aa11.07□□□□□ -0.64
UPK3A-201ENST00000216211 WRBO00258 174 aa11.07□□□□□ -0.64
UPK3A-201ENST00000216211 LY6G6CO95867 125 aa11.07□□□□□ -0.64
UPK3A-201ENST00000216211 FCGR2BP31994 310 aaPredicted RBP11.07□□□□□ -0.64
UPK3A-201ENST00000216211 PAX9P55771 341 aa11.07□□□□□ -0.64
UPK3A-201ENST00000216211 HSPE1P61604 102 aaKnown RBP11.07□□□□□ -0.64
UPK3A-201ENST00000216211 VAMP2P63027 116 aa11.07□□□□□ -0.64
UPK3A-201ENST00000216211 EIF5AP63241 154 aaKnown RBP11.07□□□□□ -0.64
UPK3A-201ENST00000216211 CLLU1Q5K131 121 aa11.07□□□□□ -0.64
UPK3A-201ENST00000216211 TXN2Q99757 166 aa11.07□□□□□ -0.64
UPK3A-201ENST00000216211 SLC25A31Q9H0C2 315 aa11.07□□□□□ -0.64
UPK3A-201ENST00000216211 MAGT1Q9H0U3 335 aa11.07□□□□□ -0.64
UPK3A-201ENST00000216211 LYRM2Q9NU23 88 aaPredicted RBP11.07□□□□□ -0.64
UPK3A-201ENST00000216211 RPS10-NUDT3A0A1W2PQS6 291 aa11.06□□□□□ -0.64
UPK3A-201ENST00000216211 NUPR2A6NF83 97 aa11.06□□□□□ -0.64
UPK3A-201ENST00000216211 SYNGR2O43760 224 aa11.06□□□□□ -0.64
UPK3A-201ENST00000216211 SSSCA1O60232 199 aa11.06□□□□□ -0.64
UPK3A-201ENST00000216211 GNG7O60262 68 aa11.06□□□□□ -0.64
UPK3A-201ENST00000216211 ATP6V1G1O75348 118 aa11.06□□□□□ -0.64
UPK3A-201ENST00000216211 MED6O75586 246 aa11.06□□□□□ -0.64
UPK3A-201ENST00000216211 TPT1P13693 172 aaKnown RBP11.06□□□□□ -0.64
UPK3A-201ENST00000216211 TAS2R30P59541 319 aa11.06□□□□□ -0.64
UPK3A-201ENST00000216211 ERHP84090 104 aaKnown RBP11.06□□□□□ -0.64
UPK3A-201ENST00000216211 AARDQ4LEZ3 155 aa11.06□□□□□ -0.64
UPK3A-201ENST00000216211 SLC7A5P1Q8MH63 180 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms