RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 C1RLQ9NZP8 487 aa17.46■□□□□ 0.38
HOXC8-201ENST00000040584 NPPCP23582 126 aa17.45■□□□□ 0.38
HOXC8-201ENST00000040584 COMPP49747 757 aaPredicted RBP17.45■□□□□ 0.38
HOXC8-201ENST00000040584 SSBP2P81877 361 aaPredicted RBP17.45■□□□□ 0.38
HOXC8-201ENST00000040584 LY6EQ16553 131 aa17.45■□□□□ 0.38
HOXC8-201ENST00000040584 PYY3Q5JQD4 70 aa17.45■□□□□ 0.38
HOXC8-201ENST00000040584 MIC13Q5XKP0 118 aa17.45■□□□□ 0.38
HOXC8-201ENST00000040584 LINC01551Q86U37 167 aa17.45■□□□□ 0.38
HOXC8-201ENST00000040584 Q8N9W7 124 aa17.45■□□□□ 0.38
HOXC8-201ENST00000040584 TMEM170AQ8WVE7 144 aa17.45■□□□□ 0.38
HOXC8-201ENST00000040584 ARL2-SNX15V9GYD0 113 aa17.45■□□□□ 0.38
HOXC8-201ENST00000040584 LINC00587B1AMM8 73 aa17.44■□□□□ 0.38
HOXC8-201ENST00000040584 INS-IGF2F8WCM5 200 aa17.44■□□□□ 0.38
HOXC8-201ENST00000040584 PFDN5Q99471 154 aa17.44■□□□□ 0.38
HOXC8-201ENST00000040584 C19orf24Q9BVV8 132 aa17.44■□□□□ 0.38
HOXC8-201ENST00000040584 MXRA5Q9NR99 2828 aa17.44■□□□□ 0.38
HOXC8-201ENST00000040584 SONP18583 2426 aaKnown RBP17.44■□□□□ 0.38
HOXC8-201ENST00000040584 ARL14EPLP0DKL9 152 aa17.44■□□□□ 0.38
HOXC8-201ENST00000040584 FOXL1Q12952 345 aa17.44■□□□□ 0.38
HOXC8-201ENST00000040584 GCSAMLQ5JQS6 135 aa17.44■□□□□ 0.38
HOXC8-201ENST00000040584 NECAP1Q8NC96 275 aa17.44■□□□□ 0.38
HOXC8-201ENST00000040584 RBM14Q96PK6 669 aaKnown RBP17.44■□□□□ 0.38
HOXC8-201ENST00000040584 SLC25A33Q9BSK2 321 aa17.44■□□□□ 0.38
HOXC8-201ENST00000040584 NDUFB4O95168 129 aa17.43■□□□□ 0.38
HOXC8-201ENST00000040584 RPL27AP46776 148 aaKnown RBP17.43■□□□□ 0.38
HOXC8-201ENST00000040584 ARSJQ5FYB0 599 aaPredicted RBP17.43■□□□□ 0.38
HOXC8-201ENST00000040584 CNIH1O95406 144 aa17.42■□□□□ 0.38
HOXC8-201ENST00000040584 ATP5G3P48201 142 aa17.42■□□□□ 0.38
HOXC8-201ENST00000040584 UBE2G2P60604 165 aa17.42■□□□□ 0.38
HOXC8-201ENST00000040584 TEX29Q8N6K0 151 aa17.42■□□□□ 0.38
HOXC8-201ENST00000040584 ZNF48Q96MX3 618 aaPredicted RBP17.42■□□□□ 0.38
HOXC8-201ENST00000040584 UHRF2Q96PU4 802 aa17.42■□□□□ 0.38
HOXC8-201ENST00000040584 LY96Q9Y6Y9 160 aa17.42■□□□□ 0.38
HOXC8-201ENST00000040584 A0A1W2PN81 502 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 A0A1W2PPQ1 181 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 A6NDX4 124 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 GCHFRP30047 84 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 CHRNA7P36544 502 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 TMEM144Q7Z5S9 345 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 STPG3Q8N7X2 389 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 SLC35E1Q96K37 410 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 RASL11BQ9BPW5 248 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 IGHV4-59P01825 116 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 APELAP0DMC3 54 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 AREGP15514 252 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 WT1-ASQ06250 92 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 C2orf83Q53S99 150 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 ACTL10Q5JWF8 245 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 OR1P1Q8NH06 330 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 RNASEH2CQ8TDP1 164 aaKnown RBP17.41■□□□□ 0.38
HOXC8-201ENST00000040584 SRSF12Q8WXF0 261 aaKnown RBP17.41■□□□□ 0.38
HOXC8-201ENST00000040584 NAV3Q8IVL0 2385 aa17.41■□□□□ 0.38
HOXC8-201ENST00000040584 FABP4P15090 132 aa17.4■□□□□ 0.38
HOXC8-201ENST00000040584 HIST1H1BP16401 226 aaKnown RBP17.4■□□□□ 0.38
HOXC8-201ENST00000040584 IER3P46695 156 aa17.4■□□□□ 0.38
HOXC8-201ENST00000040584 CX3CL1P78423 397 aa17.4■□□□□ 0.38
HOXC8-201ENST00000040584 PRR20EP86478 221 aa17.4■□□□□ 0.38
HOXC8-201ENST00000040584 PRR20CP86479 221 aa17.4■□□□□ 0.38
HOXC8-201ENST00000040584 PRR20DP86480 221 aa17.4■□□□□ 0.38
HOXC8-201ENST00000040584 PRR20BP86481 221 aa17.4■□□□□ 0.38
HOXC8-201ENST00000040584 PRR20AP86496 221 aa17.4■□□□□ 0.38
HOXC8-201ENST00000040584 FXYD3Q14802 87 aa17.4■□□□□ 0.38
HOXC8-201ENST00000040584 GFI1BQ5VTD9 330 aa17.4■□□□□ 0.38
HOXC8-201ENST00000040584 MOB4Q9Y3A3 225 aa17.4■□□□□ 0.38
HOXC8-201ENST00000040584 IGLC7A0M8Q6 106 aa17.39■□□□□ 0.38
HOXC8-201ENST00000040584 SH2D7A6NKC9 451 aaPredicted RBP17.39■□□□□ 0.38
HOXC8-201ENST00000040584 DEFA4P12838 97 aa17.39■□□□□ 0.38
HOXC8-201ENST00000040584 ZNF562Q6V9R5 426 aa17.39■□□□□ 0.38
HOXC8-201ENST00000040584 C5orf56Q8N8D9 126 aa17.39■□□□□ 0.38
HOXC8-201ENST00000040584 PACRGQ96M98 296 aaPredicted RBP17.39■□□□□ 0.38
HOXC8-201ENST00000040584 TMEM167BQ9NRX6 74 aa17.39■□□□□ 0.38
HOXC8-201ENST00000040584 TRAV9-1A0A075B6T8 112 aa17.39■□□□□ 0.37
HOXC8-201ENST00000040584 TEX22C9J3V5 150 aa17.39■□□□□ 0.37
HOXC8-201ENST00000040584 LY6G6DO95868 133 aa17.39■□□□□ 0.37
HOXC8-201ENST00000040584 Q6YL49 198 aa17.39■□□□□ 0.37
HOXC8-201ENST00000040584 SSMEM1Q8WWF3 244 aa17.39■□□□□ 0.37
HOXC8-201ENST00000040584 SFRP2Q96HF1 295 aa17.39■□□□□ 0.37
HOXC8-201ENST00000040584 FAM103A1Q9BTL3 118 aaKnown RBP17.39■□□□□ 0.37
HOXC8-201ENST00000040584 TNFRSF19Q9NS68 423 aa17.39■□□□□ 0.37
HOXC8-201ENST00000040584 SLC45A2Q9UMX9 530 aa17.39■□□□□ 0.37
HOXC8-201ENST00000040584 REG1AP05451 166 aa17.38■□□□□ 0.37
HOXC8-201ENST00000040584 ERHP84090 104 aaKnown RBP17.38■□□□□ 0.37
HOXC8-201ENST00000040584 NDPQ00604 133 aa17.38■□□□□ 0.37
HOXC8-201ENST00000040584 C11orf52Q96A22 123 aa17.38■□□□□ 0.37
HOXC8-201ENST00000040584 HIST1H2BLQ99880 126 aa17.38■□□□□ 0.37
HOXC8-201ENST00000040584 ANK3Q12955 4377 aaKnown RBP17.38■□□□□ 0.37
HOXC8-201ENST00000040584 IGHV7-81A0A0B4J1V7 117 aa17.37■□□□□ 0.37
HOXC8-201ENST00000040584 HLA-DRB1P01911 266 aa17.37■□□□□ 0.37
HOXC8-201ENST00000040584 AMY1AP04745 511 aa17.37■□□□□ 0.37
HOXC8-201ENST00000040584 RNASE2P10153 161 aaKnown RBP17.37■□□□□ 0.37
HOXC8-201ENST00000040584 CACNG8Q8WXS5 425 aa17.37■□□□□ 0.37
HOXC8-201ENST00000040584 HSPB9Q9BQS6 159 aa17.37■□□□□ 0.37
HOXC8-201ENST00000040584 ELOVL1Q9BW60 279 aa17.37■□□□□ 0.37
HOXC8-201ENST00000040584 XKRY2A2RUG3 117 aa17.37■□□□□ 0.37
HOXC8-201ENST00000040584 C9JCJ5 164 aa17.37■□□□□ 0.37
HOXC8-201ENST00000040584 OR5R1Q8NH85 324 aa17.37■□□□□ 0.37
HOXC8-201ENST00000040584 SETXQ7Z333 2677 aaKnown RBP17.36■□□□□ 0.37
HOXC8-201ENST00000040584 PDZD11Q5EBL8 140 aa17.36■□□□□ 0.37
HOXC8-201ENST00000040584 FAM78BQ5VT40 261 aa17.36■□□□□ 0.37
HOXC8-201ENST00000040584 MRPL41Q8IXM3 137 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms