RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 ZNF616Q08AN1 781 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 GAMTQ14353 236 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 ZNF345Q14585 488 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 Q5BKY6 102 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 C8orf86Q6ZUL3 223 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 TMEM116Q8NCL8 245 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 OR11H1Q8NG94 326 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 OR1N2Q8NGR9 330 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 Q8WTZ3 238 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 TMEM170AQ8WVE7 144 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 C11orf1Q9H5F2 150 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 DMRT1Q9Y5R6 373 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 NIPBLQ6KC79 2804 aaeCLIP10.04□□□□□ -0.8
PHGDH-220ENST00000641570 ZNF320A2RRD8 509 aa10.04□□□□□ -0.8
PHGDH-220ENST00000641570 PPP5D1E7EU14 171 aa10.04□□□□□ -0.8
PHGDH-220ENST00000641570 CFDP00746 253 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-220ENST00000641570 FCGR2BP31994 310 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-220ENST00000641570 SELENOTP62341 195 aa10.04□□□□□ -0.8
PHGDH-220ENST00000641570 KLK9Q2XQG4 91 aa10.04□□□□□ -0.8
PHGDH-220ENST00000641570 PVRIGQ6DKI7 326 aa10.04□□□□□ -0.8
PHGDH-220ENST00000641570 TMEM144Q7Z5S9 345 aa10.04□□□□□ -0.8
PHGDH-220ENST00000641570 BPIFCQ8NFQ6 507 aa10.04□□□□□ -0.8
PHGDH-220ENST00000641570 MYOZ3Q8TDC0 251 aa10.04□□□□□ -0.8
PHGDH-220ENST00000641570 PPP1R14BQ96C90 147 aa10.04□□□□□ -0.8
PHGDH-220ENST00000641570 GINS3Q9BRX5 216 aa10.04□□□□□ -0.8
PHGDH-220ENST00000641570 FNDC4Q9H6D8 234 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-220ENST00000641570 KLK9Q9UKQ9 250 aa10.04□□□□□ -0.8
PHGDH-220ENST00000641570 TNCP24821 2201 aa10.03□□□□□ -0.8
PHGDH-220ENST00000641570 CCL24O00175 119 aa10.03□□□□□ -0.8
PHGDH-220ENST00000641570 JTBO76095 146 aa10.03□□□□□ -0.8
PHGDH-220ENST00000641570 RD3LP0DJH9 198 aa10.03□□□□□ -0.8
PHGDH-220ENST00000641570 CAMLGP49069 296 aa10.03□□□□□ -0.8
PHGDH-220ENST00000641570 RUNX1Q01196 453 aa10.03□□□□□ -0.8
PHGDH-220ENST00000641570 BTNL8Q6UX41 500 aa10.03□□□□□ -0.8
PHGDH-220ENST00000641570 ZNF600Q6ZNG1 722 aa10.03□□□□□ -0.8
PHGDH-220ENST00000641570 Q6ZRG5 221 aa10.03□□□□□ -0.8
PHGDH-220ENST00000641570 WIPF2Q8TF74 440 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-220ENST00000641570 CCDC140Q96MF4 163 aa10.03□□□□□ -0.8
PHGDH-220ENST00000641570 CITED1Q99966 193 aa10.03□□□□□ -0.8
PHGDH-220ENST00000641570 NEURL2Q9BR09 285 aa10.03□□□□□ -0.8
PHGDH-220ENST00000641570 ZNF471Q9BX82 626 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-220ENST00000641570 PEMTQ9UBM1 199 aa10.03□□□□□ -0.8
PHGDH-220ENST00000641570 BMPR1BO00238 502 aa10.02□□□□□ -0.81
PHGDH-220ENST00000641570 BCL2L11O43521 198 aa10.02□□□□□ -0.81
PHGDH-220ENST00000641570 MYCNOSP40205 109 aa10.02□□□□□ -0.81
PHGDH-220ENST00000641570 MLANAQ16655 118 aa10.02□□□□□ -0.81
PHGDH-220ENST00000641570 DEFB136Q30KP8 78 aa10.02□□□□□ -0.81
PHGDH-220ENST00000641570 TIGITQ495A1 244 aa10.02□□□□□ -0.81
PHGDH-220ENST00000641570 TCTEX1D4Q5JR98 221 aa10.02□□□□□ -0.81
PHGDH-220ENST00000641570 CYP2G1PQ6ZSU1 146 aa10.02□□□□□ -0.81
PHGDH-220ENST00000641570 KCNRGQ8N5I3 272 aa10.02□□□□□ -0.81
PHGDH-220ENST00000641570 TRGV9Q99603 122 aa10.02□□□□□ -0.81
PHGDH-220ENST00000641570 C20orf24Q9BUV8 137 aa10.02□□□□□ -0.81
PHGDH-220ENST00000641570 PBDC1Q9BVG4 233 aa10.02□□□□□ -0.81
PHGDH-220ENST00000641570 ELOVL1Q9BW60 279 aa10.02□□□□□ -0.81
PHGDH-220ENST00000641570 UFC1Q9Y3C8 167 aa10.02□□□□□ -0.81
PHGDH-220ENST00000641570 PLXNB1O43157 2135 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 IGHV4OR15-8A0A075B7B6 117 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 A0A087WW49 117 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 RNF222A6NCQ9 220 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 PMS2P5A8MQ11 134 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 PRSS46E5RG02 174 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 I3L521 148 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 NDUFA4O00483 81 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 IGLC1P0CG04 106 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 HOXD3P31249 432 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-220ENST00000641570 LYZP61626 148 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 ARL16Q0P5N6 197 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 EIF5AL1Q6IS14 154 aaKnown RBP10.01□□□□□ -0.81
PHGDH-220ENST00000641570 TREML4Q6UXN2 200 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 TMUB2Q71RG4 321 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 HAPLN4Q86UW8 402 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 THAP8Q8NA92 274 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 OR51G1Q8NGK1 321 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 GNPNAT1Q96EK6 184 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-220ENST00000641570 RNF24Q9Y225 148 aa10.01□□□□□ -0.81
PHGDH-220ENST00000641570 TET2Q6N021 2002 aaPredicted RBP10□□□□□ -0.81
PHGDH-220ENST00000641570 IGHV3-35A0A0C4DH35 117 aa10□□□□□ -0.81
PHGDH-220ENST00000641570 COX7A2P2O60397 106 aa10□□□□□ -0.81
PHGDH-220ENST00000641570 OR2C1O95371 312 aa10□□□□□ -0.81
PHGDH-220ENST00000641570 TSPAN15O95858 294 aa10□□□□□ -0.81
PHGDH-220ENST00000641570 TOMM40O96008 361 aa10□□□□□ -0.81
PHGDH-220ENST00000641570 IL4P05112 153 aa10□□□□□ -0.81
PHGDH-220ENST00000641570 TPT1P13693 172 aaKnown RBP10□□□□□ -0.81
PHGDH-220ENST00000641570 YPEL3P61236 119 aaPredicted RBP10□□□□□ -0.81
PHGDH-220ENST00000641570 VWC2Q2TAL6 325 aa10□□□□□ -0.81
PHGDH-220ENST00000641570 C1QL4Q86Z23 238 aa10□□□□□ -0.81
PHGDH-220ENST00000641570 HSD17B11Q8NBQ5 300 aa10□□□□□ -0.81
PHGDH-220ENST00000641570 OR11H4Q8NGC9 324 aa10□□□□□ -0.81
PHGDH-220ENST00000641570 OR1L4Q8NGR5 311 aa10□□□□□ -0.81
PHGDH-220ENST00000641570 METTL26Q96S19 204 aa10□□□□□ -0.81
PHGDH-220ENST00000641570 WDR61Q9GZS3 305 aaKnown RBP10□□□□□ -0.81
PHGDH-220ENST00000641570 TMEM231Q9H6L2 316 aa10□□□□□ -0.81
PHGDH-220ENST00000641570 WDR83OSQ9Y284 106 aa10□□□□□ -0.81
PHGDH-220ENST00000641570 PUS1Q9Y606 427 aaKnown RBP eCLIP10□□□□□ -0.81
PHGDH-220ENST00000641570 G3V3Q6 166 aa9.99□□□□□ -0.81
PHGDH-220ENST00000641570 AGPAT2O15120 278 aa9.99□□□□□ -0.81
PHGDH-220ENST00000641570 TRBV12-3P01733 135 aa9.99□□□□□ -0.81
PHGDH-220ENST00000641570 CTSGP08311 255 aa9.99□□□□□ -0.81
PHGDH-220ENST00000641570 LINC00869P0C866 280 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms