RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ERVK11-1P61568 191 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 MRPL49Q13405 166 aaKnown RBP11.22□□□□□ -0.61
SCARB2-227ENST00000640957 TBC1D28Q2M2D7 210 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 DUX4L9Q6RFH8 374 aaPredicted RBP11.22□□□□□ -0.61
SCARB2-227ENST00000640957 LINC00596Q86U02 117 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 DEFB125Q8N687 156 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 OR8A1Q8NGG7 326 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 CLUHP3Q96NS8 147 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 PKIBQ9C010 78 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 SH3BGRL2Q9UJC5 107 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 ATRXP46100 2492 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 TRGV5A0A0B4J1U4 118 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 DNPH1O43598 174 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 TIMM8AO60220 97 aaPredicted RBP11.22□□□□□ -0.61
SCARB2-227ENST00000640957 MPDU1O75352 247 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 ARF6P62330 175 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 SLC35E4Q6ICL7 350 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 PNKDQ8N490 385 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 C11orf52Q96A22 123 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 JMJD8Q96S16 334 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 REG1AP05451 166 aa11.21□□□□□ -0.61
SCARB2-227ENST00000640957 REG1BP48304 166 aa11.21□□□□□ -0.61
SCARB2-227ENST00000640957 ZNF146Q15072 292 aa11.21□□□□□ -0.61
SCARB2-227ENST00000640957 CORO2AQ92828 525 aa11.21□□□□□ -0.61
SCARB2-227ENST00000640957 RELNP78509 3460 aa11.21□□□□□ -0.61
SCARB2-227ENST00000640957 SPAARA0A1B0GVQ0 90 aa11.21□□□□□ -0.62
SCARB2-227ENST00000640957 NKX2-8O15522 239 aa11.21□□□□□ -0.62
SCARB2-227ENST00000640957 ORM2P19652 201 aa11.21□□□□□ -0.62
SCARB2-227ENST00000640957 SMAGPQ0VAQ4 97 aa11.21□□□□□ -0.62
SCARB2-227ENST00000640957 FER1L6-AS1Q8NA97 138 aa11.21□□□□□ -0.62
SCARB2-227ENST00000640957 TMUB1Q9BVT8 246 aa11.21□□□□□ -0.62
SCARB2-227ENST00000640957 TRAV9-1A0A075B6T8 112 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 IGKV1-16P04430 117 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 FAM106CPP0CH98 169 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 GPR183P32249 361 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 RHOGP84095 191 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 MEF2CQ06413 473 aaPredicted RBP11.2□□□□□ -0.62
SCARB2-227ENST00000640957 FAM106AQ4KMX7 169 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 CD177Q8N6Q3 437 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 FLYWCH2Q96CP2 140 aaKnown RBP11.2□□□□□ -0.62
SCARB2-227ENST00000640957 J3QR06 171 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 SMPD2O60906 423 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 SP1P08047 785 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 SPRNQ5BIV9 151 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 TLN1Q9Y490 2541 aaKnown RBP11.2□□□□□ -0.62
SCARB2-227ENST00000640957 ZZEF1O43149 2961 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 HTR1DP28221 377 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 C10orf55Q5SWW7 151 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 FAM120AOSQ5T036 256 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 ACP7Q6ZNF0 438 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 OR4A5Q8NH83 315 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 LRRC29Q8WV35 223 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 TTTY13Q9BZ97 58 aa11.2□□□□□ -0.62
SCARB2-227ENST00000640957 A0A1W2PNU3 283 aaPredicted RBP11.19□□□□□ -0.62
SCARB2-227ENST00000640957 KLF14Q8TD94 323 aaPredicted RBP11.19□□□□□ -0.62
SCARB2-227ENST00000640957 PERPQ96FX8 193 aa11.19□□□□□ -0.62
SCARB2-227ENST00000640957 IGF2BP2-AS1Q96M15 143 aa11.19□□□□□ -0.62
SCARB2-227ENST00000640957 TXNDC17Q9BRA2 123 aa11.19□□□□□ -0.62
SCARB2-227ENST00000640957 OR51B2Q9Y5P1 312 aa11.19□□□□□ -0.62
SCARB2-227ENST00000640957 ANKRD11Q6UB99 2663 aaPredicted RBP11.19□□□□□ -0.62
SCARB2-227ENST00000640957 SLC25A5P05141 298 aaKnown RBP11.19□□□□□ -0.62
SCARB2-227ENST00000640957 PRR20EP86478 221 aa11.19□□□□□ -0.62
SCARB2-227ENST00000640957 PRR20CP86479 221 aa11.19□□□□□ -0.62
SCARB2-227ENST00000640957 PRR20DP86480 221 aa11.19□□□□□ -0.62
SCARB2-227ENST00000640957 PRR20BP86481 221 aa11.19□□□□□ -0.62
SCARB2-227ENST00000640957 PRR20AP86496 221 aa11.19□□□□□ -0.62
SCARB2-227ENST00000640957 PRB3Q04118 309 aaPredicted RBP11.19□□□□□ -0.62
SCARB2-227ENST00000640957 ZNF766Q5HY98 468 aa11.19□□□□□ -0.62
SCARB2-227ENST00000640957 MBD6Q96DN6 1003 aa11.19□□□□□ -0.62
SCARB2-227ENST00000640957 TMEM167BQ9NRX6 74 aa11.19□□□□□ -0.62
SCARB2-227ENST00000640957 ZBTB34Q8NCN2 500 aa11.19□□□□□ -0.62
SCARB2-227ENST00000640957 MOSP00540 346 aa11.18□□□□□ -0.62
SCARB2-227ENST00000640957 ZGRF1Q86YA3 2104 aa11.18□□□□□ -0.62
SCARB2-227ENST00000640957 IGF2RP11717 2491 aa11.18□□□□□ -0.62
SCARB2-227ENST00000640957 RNFT1Q5M7Z0 435 aa11.18□□□□□ -0.62
SCARB2-227ENST00000640957 C12orf54Q6X4T0 127 aa11.18□□□□□ -0.62
SCARB2-227ENST00000640957 C11orf53Q8IXP5 236 aa11.18□□□□□ -0.62
SCARB2-227ENST00000640957 C5orf17Q8NAS9 161 aa11.18□□□□□ -0.62
SCARB2-227ENST00000640957 DEFB124Q8NES8 71 aa11.18□□□□□ -0.62
SCARB2-227ENST00000640957 TMEM191AQ9H0A3 160 aa11.18□□□□□ -0.62
SCARB2-227ENST00000640957 THYN1Q9P016 225 aa11.18□□□□□ -0.62
SCARB2-227ENST00000640957 ZNF835Q9Y2P0 537 aa11.18□□□□□ -0.62
SCARB2-227ENST00000640957 PGPA6NDG6 321 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 SRRM4A7MD48 611 aaKnown RBP11.17□□□□□ -0.62
SCARB2-227ENST00000640957 J3QW42 95 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 CHEK1O14757 476 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 IGLC1P0CG04 106 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 ACP1P24666 158 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 TMEM177Q53S58 311 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 PEAR1Q5VY43 1037 aaPredicted RBP11.17□□□□□ -0.62
SCARB2-227ENST00000640957 WDR82Q6UXN9 313 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 BPIFA4PQ86YQ2 179 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 OR2Z1Q8NG97 314 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 MRPL27Q9P0M9 148 aaKnown RBP11.17□□□□□ -0.62
SCARB2-227ENST00000640957 DSCAML1Q8TD84 2053 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 TMSB15BA0A087X1C1 80 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 C21orf140B9A014 251 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 E7EUB6 86 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 C8orf88P0DMB2 117 aa11.17□□□□□ -0.62
SCARB2-227ENST00000640957 GTSF1Q8WW33 167 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms