RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 FAM222AQ5U5X8 452 aa14.3□□□□□ -0.12
TARDBP-228ENST00000629725 Q8N1X5 172 aa14.3□□□□□ -0.12
TARDBP-228ENST00000629725 SEPSECSQ9HD40 501 aaKnown RBP14.3□□□□□ -0.12
TARDBP-228ENST00000629725 RFNGQ9Y644 331 aa14.3□□□□□ -0.12
TARDBP-228ENST00000629725 TRAV30A0A087WSZ9 112 aa14.29□□□□□ -0.12
TARDBP-228ENST00000629725 HNRNPCP07910 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
TARDBP-228ENST00000629725 HLA-DRB4P13762 266 aa14.29□□□□□ -0.12
TARDBP-228ENST00000629725 PRSS3P35030 304 aa14.29□□□□□ -0.12
TARDBP-228ENST00000629725 TSPAN5P62079 268 aa14.29□□□□□ -0.12
TARDBP-228ENST00000629725 YIPF6Q96EC8 236 aa14.29□□□□□ -0.12
TARDBP-228ENST00000629725 PDCD10Q9BUL8 212 aa14.29□□□□□ -0.12
TARDBP-228ENST00000629725 HLA-DRB4X5D2U9 266 aa14.29□□□□□ -0.12
TARDBP-228ENST00000629725 DNAH5Q8TE73 4624 aa14.29□□□□□ -0.12
TARDBP-228ENST00000629725 HLA-DMAP28067 261 aa14.28□□□□□ -0.12
TARDBP-228ENST00000629725 RPL5P46777 297 aaKnown RBP14.28□□□□□ -0.12
TARDBP-228ENST00000629725 NRN1Q9NPD7 142 aa14.28□□□□□ -0.12
TARDBP-228ENST00000629725 TMED3Q9Y3Q3 217 aa14.28□□□□□ -0.12
TARDBP-228ENST00000629725 A0A0B4J293 547 aa14.27□□□□□ -0.13
TARDBP-228ENST00000629725 ETV6P41212 452 aa14.27□□□□□ -0.13
TARDBP-228ENST00000629725 HOXA1P49639 335 aaPredicted RBP14.27□□□□□ -0.13
TARDBP-228ENST00000629725 FAM3BP58499 235 aaPredicted RBP14.27□□□□□ -0.13
TARDBP-228ENST00000629725 OXA1LQ15070 435 aa14.27□□□□□ -0.13
TARDBP-228ENST00000629725 TMEM88Q6PEY1 159 aa14.27□□□□□ -0.13
TARDBP-228ENST00000629725 LYSMD2Q8IV50 215 aa14.27□□□□□ -0.13
TARDBP-228ENST00000629725 Q8WTZ3 238 aa14.27□□□□□ -0.13
TARDBP-228ENST00000629725 VCX3AQ9NNX9 186 aa14.27□□□□□ -0.13
TARDBP-228ENST00000629725 FXYD7P58549 80 aa14.26□□□□□ -0.13
TARDBP-228ENST00000629725 ENY2Q9NPA8 101 aa14.26□□□□□ -0.13
TARDBP-228ENST00000629725 SCRT2Q9NQ03 307 aa14.26□□□□□ -0.13
TARDBP-228ENST00000629725 IGKV1-5P01602 117 aa14.25□□□□□ -0.13
TARDBP-228ENST00000629725 IGKV3-20P01619 116 aa14.25□□□□□ -0.13
TARDBP-228ENST00000629725 NKX2-1P43699 371 aaPredicted RBP14.25□□□□□ -0.13
TARDBP-228ENST00000629725 AKR1C2P52895 323 aa14.25□□□□□ -0.13
TARDBP-228ENST00000629725 SIGLEC15Q6ZMC9 328 aa14.25□□□□□ -0.13
TARDBP-228ENST00000629725 A0A087WXM4 84 aa14.24□□□□□ -0.13
TARDBP-228ENST00000629725 IGLC1P0CG04 106 aa14.24□□□□□ -0.13
TARDBP-228ENST00000629725 UCP3P55916 312 aa14.24□□□□□ -0.13
TARDBP-228ENST00000629725 GDF5OSQ5U4N7 250 aa14.24□□□□□ -0.13
TARDBP-228ENST00000629725 C6orf223Q8N319 242 aa14.24□□□□□ -0.13
TARDBP-228ENST00000629725 C15orf53Q8NAA6 179 aa14.24□□□□□ -0.13
TARDBP-228ENST00000629725 OR1S2Q8NGQ3 325 aa14.24□□□□□ -0.13
TARDBP-228ENST00000629725 GPX8Q8TED1 209 aa14.24□□□□□ -0.13
TARDBP-228ENST00000629725 ATG101Q9BSB4 218 aa14.24□□□□□ -0.13
TARDBP-228ENST00000629725 COMMD3Q9UBI1 195 aa14.24□□□□□ -0.13
TARDBP-228ENST00000629725 RPS10-NUDT3A0A1W2PQS6 291 aa14.23□□□□□ -0.13
TARDBP-228ENST00000629725 BUB3O43684 328 aa14.23□□□□□ -0.13
TARDBP-228ENST00000629725 P0C879 139 aa14.23□□□□□ -0.13
TARDBP-228ENST00000629725 YPEL3P61236 119 aaPredicted RBP14.23□□□□□ -0.13
TARDBP-228ENST00000629725 DHODHQ02127 395 aa14.23□□□□□ -0.13
TARDBP-228ENST00000629725 USF2Q15853 346 aaPredicted RBP14.23□□□□□ -0.13
TARDBP-228ENST00000629725 BSXQ3C1V8 233 aa14.23□□□□□ -0.13
TARDBP-228ENST00000629725 YTHDF2Q9Y5A9 579 aaKnown RBP14.23□□□□□ -0.13
TARDBP-228ENST00000629725 NBDYA0A0U1RRE5 68 aa14.22□□□□□ -0.13
TARDBP-228ENST00000629725 SMIM31A0A1B0GVY4 71 aa14.22□□□□□ -0.13
TARDBP-228ENST00000629725 IL4P05112 153 aa14.22□□□□□ -0.13
TARDBP-228ENST00000629725 OR10J1P30954 320 aa14.22□□□□□ -0.13
TARDBP-228ENST00000629725 SNX29P2Q8IUI4 249 aa14.22□□□□□ -0.13
TARDBP-228ENST00000629725 ZNF709Q8N972 641 aa14.22□□□□□ -0.13
TARDBP-228ENST00000629725 LOC102723971A0A1B0GUV8 181 aa14.21□□□□□ -0.13
TARDBP-228ENST00000629725 GSTZ1O43708 216 aaPredicted RBP14.21□□□□□ -0.13
TARDBP-228ENST00000629725 ATG12O94817 140 aa14.21□□□□□ -0.13
TARDBP-228ENST00000629725 TNFAIP8O95379 198 aa14.21□□□□□ -0.13
TARDBP-228ENST00000629725 HBE1P02100 147 aa14.21□□□□□ -0.13
TARDBP-228ENST00000629725 APOA1P02647 267 aa14.21□□□□□ -0.13
TARDBP-228ENST00000629725 RND2P52198 227 aa14.21□□□□□ -0.13
TARDBP-228ENST00000629725 DEFB1P60022 68 aa14.21□□□□□ -0.13
TARDBP-228ENST00000629725 DAD1P61803 113 aa14.21□□□□□ -0.13
TARDBP-228ENST00000629725 NCS1P62166 190 aa14.21□□□□□ -0.13
TARDBP-228ENST00000629725 PRSS54Q6PEW0 395 aa14.21□□□□□ -0.13
TARDBP-228ENST00000629725 GSG1LQ6UXU4 331 aa14.21□□□□□ -0.13
TARDBP-228ENST00000629725 SAV1Q9H4B6 383 aaPredicted RBP14.21□□□□□ -0.13
TARDBP-228ENST00000629725 SCPEP1Q9HB40 452 aa14.21□□□□□ -0.13
TARDBP-228ENST00000629725 GOLT1BQ9Y3E0 138 aa14.21□□□□□ -0.13
TARDBP-228ENST00000629725 RCVRNP35243 200 aa14.2□□□□□ -0.14
TARDBP-228ENST00000629725 OR4B1Q8NGF8 309 aa14.2□□□□□ -0.14
TARDBP-228ENST00000629725 TP53RKQ96S44 253 aa14.2□□□□□ -0.14
TARDBP-228ENST00000629725 C7orf50Q9BRJ6 194 aaKnown RBP14.2□□□□□ -0.14
TARDBP-228ENST00000629725 FUNDC2Q9BWH2 189 aa14.2□□□□□ -0.14
TARDBP-228ENST00000629725 SLC25A4P12235 298 aa14.19□□□□□ -0.14
TARDBP-228ENST00000629725 PGAM2P15259 253 aa14.19□□□□□ -0.14
TARDBP-228ENST00000629725 ELK1P19419 428 aa14.19□□□□□ -0.14
TARDBP-228ENST00000629725 HTR2BP41595 481 aa14.19□□□□□ -0.14
TARDBP-228ENST00000629725 RND3P61587 244 aa14.19□□□□□ -0.14
TARDBP-228ENST00000629725 VBP1P61758 197 aa14.19□□□□□ -0.14
TARDBP-228ENST00000629725 FOXI2Q6ZQN5 318 aa14.19□□□□□ -0.14
TARDBP-228ENST00000629725 ZNRF2Q8NHG8 242 aa14.19□□□□□ -0.14
TARDBP-228ENST00000629725 LINC00052Q96N35 136 aa14.19□□□□□ -0.14
TARDBP-228ENST00000629725 CLUHP3Q96NS8 147 aa14.19□□□□□ -0.14
TARDBP-228ENST00000629725 SLC35B3Q9H1N7 401 aa14.19□□□□□ -0.14
TARDBP-228ENST00000629725 M0QYG6 137 aa14.18□□□□□ -0.14
TARDBP-228ENST00000629725 HPGDSO60760 199 aa14.18□□□□□ -0.14
TARDBP-228ENST00000629725 PIGPP57054 158 aa14.18□□□□□ -0.14
TARDBP-228ENST00000629725 RRN3P1Q2M238 152 aa14.18□□□□□ -0.14
TARDBP-228ENST00000629725 SPATA12Q7Z6I5 190 aa14.18□□□□□ -0.14
TARDBP-228ENST00000629725 C1orf158Q8N1D5 194 aa14.18□□□□□ -0.14
TARDBP-228ENST00000629725 RRNAD1Q96FB5 475 aaKnown RBP14.18□□□□□ -0.14
TARDBP-228ENST00000629725 ZNF486Q96H40 463 aaPredicted RBP14.18□□□□□ -0.14
TARDBP-228ENST00000629725 C3orf85A0A1B0GTC6 90 aa14.17□□□□□ -0.14
TARDBP-228ENST00000629725 RD3LP0DJH9 198 aa14.17□□□□□ -0.14
TARDBP-228ENST00000629725 PI3P19957 117 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms