RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 PAX2Q02962 417 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 MUC21Q5SSG8 566 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 C12orf54Q6X4T0 127 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 ISLRO14498 428 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 MYOD1P15172 320 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 TCL1AP56279 114 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 UBE2G1P62253 170 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 SLC35B1P78383 322 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 FXYD3Q14802 87 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 RTL8BQ17RB0 113 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 MOGAT3Q86VF5 341 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 OR2V2Q96R30 315 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 C19orf24Q9BVV8 132 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 FAM181BA6NEQ2 426 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 AHRRA9YTQ3 701 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 M0R2Z0 102 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 HLA-DQA1P01909 254 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 MGST1P10620 155 aaKnown RBP7.1□□□□□ -1.27
VCL-207ENST00000624354 POU2AF1Q16633 256 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 C17orf58Q2M2W7 97 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 UTF1Q5T230 341 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 IBA57Q5T440 356 aaKnown RBP7.1□□□□□ -1.27
VCL-207ENST00000624354 SARAFQ96BY9 339 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 SERTAD4Q9NUC0 356 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 PEF1Q9UBV8 284 aaKnown RBP7.1□□□□□ -1.27
VCL-207ENST00000624354 ABCA4P78363 2273 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 KBTBD11-OT1A0A1B0GTJ5 212 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 APCSP02743 223 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 AMY1AP04745 511 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 CGB3P0DN86 165 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 CGB7P0DN87 165 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 PRCDQ00LT1 54 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 NHLH1Q02575 133 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 FER1L6-AS1Q8NA97 138 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 CLUHP3Q96NS8 147 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 ZNF257Q9Y2Q1 563 aa7.1□□□□□ -1.27
VCL-207ENST00000624354 A0A1W2PRE2 83 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 PRR33A8MZF0 331 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 GGTLC3B5MD39 225 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 CD5LO43866 347 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 GATA2P23769 480 aaPredicted RBP7.09□□□□□ -1.27
VCL-207ENST00000624354 TBR1Q16650 682 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 MRPL54Q6P161 138 aaKnown RBP7.09□□□□□ -1.27
VCL-207ENST00000624354 EBLN2Q6P2I7 272 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 MOB3BQ86TA1 216 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 OR8B3Q8NGG8 313 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 ZNF503Q96F45 646 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 OR8B2Q96RD0 313 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 ST20Q9HBF5 79 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 PLSCR4Q9NRQ2 329 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 HCFC1P51610 2035 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 PTPRBP23467 1997 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 TRAV8-6A0A0B4J262 113 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 GAGE10A6NGK3 116 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 IGLC1P0CG04 106 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 C8orf88P0DMB2 117 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 PRB4P10163 310 aaPredicted RBP7.09□□□□□ -1.27
VCL-207ENST00000624354 CA7P43166 264 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 ATP5IP56385 69 aaPredicted RBP7.09□□□□□ -1.27
VCL-207ENST00000624354 TNXAQ16473 311 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 SLC25A34Q6PIV7 304 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 PET117Q6UWS5 81 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 BHLHA15Q7RTS1 189 aaPredicted RBP7.09□□□□□ -1.27
VCL-207ENST00000624354 TP73-AS1Q9UF72 201 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 PROCRQ9UNN8 238 aa7.09□□□□□ -1.27
VCL-207ENST00000624354 IGKV1OR2-108A0A075B7D4 117 aa7.09□□□□□ -1.28
VCL-207ENST00000624354 G3V4G9 280 aa7.09□□□□□ -1.28
VCL-207ENST00000624354 UPK2O00526 184 aa7.09□□□□□ -1.28
VCL-207ENST00000624354 SPRY3O43610 288 aa7.09□□□□□ -1.28
VCL-207ENST00000624354 FTH1P19P0C7X4 201 aa7.09□□□□□ -1.28
VCL-207ENST00000624354 PPOXP50336 477 aa7.09□□□□□ -1.28
VCL-207ENST00000624354 RBPJQ06330 500 aa7.09□□□□□ -1.28
VCL-207ENST00000624354 ASPHD1Q5U4P2 390 aa7.09□□□□□ -1.28
VCL-207ENST00000624354 SAMD13Q5VXD3 122 aa7.09□□□□□ -1.28
VCL-207ENST00000624354 S100A7AQ86SG5 101 aa7.09□□□□□ -1.28
VCL-207ENST00000624354 TMEM186Q96B77 213 aa7.09□□□□□ -1.28
VCL-207ENST00000624354 ZNF331Q9NQX6 463 aaPredicted RBP7.09□□□□□ -1.28
VCL-207ENST00000624354 ZNF71Q9NQZ8 489 aaPredicted RBP7.09□□□□□ -1.28
VCL-207ENST00000624354 CCL11P51671 97 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 FOXC1Q12948 553 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 MSMPQ1L6U9 139 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 C2orf83Q53S99 150 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 Q5PR19 223 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 OR1B1Q8NGR6 318 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 C18orf32Q8TCD1 76 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 SPG11Q96JI7 2443 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 SMIM27A0A1W2PRY6 76 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 OR4C46A6NHA9 309 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 LHBP01229 141 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 IGLV2-8P01709 118 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 SPRNQ5BIV9 151 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 FAM201AQ5SY85 155 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 FAM169BQ8N8A8 192 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 ITLN1Q8WWA0 313 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 SLC25A33Q9BSK2 321 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 SLC25A15Q9Y619 301 aa7.08□□□□□ -1.28
VCL-207ENST00000624354 USF1P22415 310 aaPredicted RBP7.07□□□□□ -1.28
VCL-207ENST00000624354 PLA2G2CQ5R387 149 aa7.07□□□□□ -1.28
VCL-207ENST00000624354 RNASEKQ6P5S7 137 aaKnown RBP7.07□□□□□ -1.28
VCL-207ENST00000624354 GTF2H5Q6ZYL4 71 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms