RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 A0A0G2JLM5 398 aa5.96□□□□□ -1.46
CLK1-215ENST00000621181 A0A0G2JRQ6 117 aa5.96□□□□□ -1.46
CLK1-215ENST00000621181 C5orf52A6NGY3 159 aa5.96□□□□□ -1.46
CLK1-215ENST00000621181 UMAD1C9J7I0 102 aa5.96□□□□□ -1.46
CLK1-215ENST00000621181 RAB29O14966 203 aa5.96□□□□□ -1.46
CLK1-215ENST00000621181 MT-ND4LP03901 98 aa5.96□□□□□ -1.46
CLK1-215ENST00000621181 SYNJ2BPP57105 145 aa5.96□□□□□ -1.46
CLK1-215ENST00000621181 FAM71F2Q6NXP2 309 aa5.96□□□□□ -1.46
CLK1-215ENST00000621181 ZNF562Q6V9R5 426 aa5.96□□□□□ -1.46
CLK1-215ENST00000621181 SFT2D1Q8WV19 159 aa5.96□□□□□ -1.46
CLK1-215ENST00000621181 IFI27L2Q9H2X8 130 aa5.96□□□□□ -1.46
CLK1-215ENST00000621181 METTL1Q9UBP6 276 aaKnown RBP5.96□□□□□ -1.46
CLK1-215ENST00000621181 SLC25A17O43808 307 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 CA2P00918 260 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 IGKV1-39P01597 117 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 IGKV1D-39P04432 117 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 F2RP25116 425 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 MC5RP33032 325 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 AKR1C3P42330 323 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 BAXQ07812 192 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 KLF5Q13887 457 aaPredicted RBP5.95□□□□□ -1.46
CLK1-215ENST00000621181 ZNF266Q14584 549 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 RHEBQ15382 184 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 RPL39P5Q59GN2 51 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 TMEM182Q6ZP80 229 aaPredicted RBP5.95□□□□□ -1.46
CLK1-215ENST00000621181 GPR146Q96CH1 333 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 SLC25A31Q9H0C2 315 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 MAGT1Q9H0U3 335 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 PLEKHA3Q9HB20 300 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 WASHC3Q9Y3C0 194 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 OR2W1Q9Y3N9 320 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 TRAV1-1A0A0B4J248 108 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 A0A1B0GU03 582 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 H0YJW9 148 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 SSSCA1O60232 199 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 SRP19P09132 144 aaKnown RBP5.95□□□□□ -1.46
CLK1-215ENST00000621181 CT45A6P0DMU7 189 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 CT45A5P0DMU8 189 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 CT45A7P0DMV0 189 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 RPL35P42766 123 aaKnown RBP5.95□□□□□ -1.46
CLK1-215ENST00000621181 MEOX2P50222 304 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 HLA-DRB3P79483 266 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 CLINT1Q14677 625 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 FXYD3Q14802 87 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 Q6ZRM9 215 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 OR5C1Q8NGR4 320 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 OR2G3Q8NGZ4 309 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 FAM213BQ8TBF2 198 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 C2CD4CQ8TF44 421 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 RARRES2Q99969 163 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 RPS10P5Q9NQ39 176 aa5.95□□□□□ -1.46
CLK1-215ENST00000621181 H3BUA1 57 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 UBE2CO00762 179 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 EIF3GO75821 320 aaKnown RBP eCLIP5.94□□□□□ -1.46
CLK1-215ENST00000621181 CNIH1O95406 144 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 LY6G6CO95867 125 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 PRH1P02810 166 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 IGKV1-16P04430 117 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 SULT1A1P50225 295 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 CD81P60033 236 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 RAB5BP61020 215 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 ICAM4Q14773 271 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 RPEL1Q2QD12 228 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 ZNF585BQ52M93 769 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 ZNF506Q5JVG8 444 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 DPPA3Q6W0C5 159 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 ZFP82Q8N141 532 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 OR5T1Q8NG75 326 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 OR5AN1Q8NGI8 311 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 LSM10Q969L4 123 aaKnown RBP5.94□□□□□ -1.46
CLK1-215ENST00000621181 GNPNAT1Q96EK6 184 aaPredicted RBP5.94□□□□□ -1.46
CLK1-215ENST00000621181 RNF5Q99942 180 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 PBDC1Q9BVG4 233 aa5.94□□□□□ -1.46
CLK1-215ENST00000621181 IZUMO1RA6ND01 250 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 RBFOX3A6NFN3 312 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 CST7O76096 145 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 IGKV1-5P01602 117 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 RAB5AP20339 215 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 TAS2R30P59541 319 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 RPS16P62249 146 aaKnown RBP5.93□□□□□ -1.46
CLK1-215ENST00000621181 PSG5Q15238 335 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 CMTM1Q8IZ96 169 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 OR10G4Q8NGN3 311 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 LINC00476Q8WZB0 136 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 C12orf57Q99622 126 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 ATP5SQ99766 215 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 EIF5A2Q9GZV4 153 aaKnown RBP5.93□□□□□ -1.46
CLK1-215ENST00000621181 SIGLEC8Q9NYZ4 499 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 OR1A1Q9P1Q5 309 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 PEF1Q9UBV8 284 aaKnown RBP5.93□□□□□ -1.46
CLK1-215ENST00000621181 HYDINQ4G0P3 5121 aa5.93□□□□□ -1.46
CLK1-215ENST00000621181 A0A087WWC5 75 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 RBMY1BA6NDE4 496 aaKnown RBP5.92□□□□□ -1.46
CLK1-215ENST00000621181 RBMY1EA6NEQ0 496 aaKnown RBP5.92□□□□□ -1.46
CLK1-215ENST00000621181 C1orf196B1AJZ1 125 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 TNFSF12O43508 249 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 SCAF4O95104 1147 aaKnown RBP5.92□□□□□ -1.46
CLK1-215ENST00000621181 BRI3O95415 125 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 CSN3P07498 182 aa5.92□□□□□ -1.46
CLK1-215ENST00000621181 RBMY1DP0C7P1 496 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms