RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 HPRT1P00492 218 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 GCGP01275 180 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 IGHG2P01859 326 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 IGKV1-16P04430 117 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 METTL15P1P0C7V9 234 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 DUTP33316 252 aaKnown RBP4.14□□□□□ -1.75
SHMT1-211ENST00000618902 GPR12P47775 334 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 FHITP49789 147 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 FAM3BP58499 235 aaPredicted RBP4.14□□□□□ -1.75
SHMT1-211ENST00000618902 OR2B8PP59922 312 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 SSBP2P81877 361 aaPredicted RBP4.14□□□□□ -1.75
SHMT1-211ENST00000618902 MEF2BQ02080 365 aaPredicted RBP4.14□□□□□ -1.75
SHMT1-211ENST00000618902 TNFRSF9Q07011 255 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 RAB31Q13636 194 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 RTL8BQ17RB0 113 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 MRGPRG-AS1Q2M3A8 158 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 COX19Q49B96 90 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 COA6Q5JTJ3 125 aaKnown RBP4.14□□□□□ -1.75
SHMT1-211ENST00000618902 CYP2G1PQ6ZSU1 146 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 H2BFWTQ7Z2G1 175 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 TMEM217Q8N7C4 229 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 C5orf56Q8N8D9 126 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 Q8N9W7 124 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 WFDC9Q8NEX5 89 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 OR5AN1Q8NGI8 311 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 ADTRPQ96IZ2 230 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 FAM210BQ96KR6 192 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 TMEM68Q96MH6 324 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 PFDN5Q99471 154 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 RARRES2Q99969 163 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 SLC25A33Q9BSK2 321 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 SH3BGRL3Q9H299 93 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 NIT2Q9NQR4 276 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 GSN-AS1Q9NRJ2 163 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 SERTAD4Q9NUC0 356 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 CACNG5Q9UF02 275 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 TSSC4Q9Y5U2 329 aaPredicted RBP4.14□□□□□ -1.75
SHMT1-211ENST00000618902 LY96Q9Y6Y9 160 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 ARL2-SNX15V9GYD0 113 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 TENM3Q9P273 2699 aa4.14□□□□□ -1.75
SHMT1-211ENST00000618902 TET2Q6N021 2002 aaPredicted RBP4.13□□□□□ -1.75
SHMT1-211ENST00000618902 PCP4L1A6NKN8 68 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 PPP5D1E7EU14 171 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 FCN1O00602 326 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 CLN5O75503 358 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 TMEM50AO95807 157 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 IGLV2-23P01705 113 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 TYMSP04818 313 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 IGF1P05019 195 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 CRYGBP07316 175 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 ELANEP08246 267 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 P0C879 139 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 HIST1H1BP16401 226 aaKnown RBP4.13□□□□□ -1.75
SHMT1-211ENST00000618902 TMEM11P17152 192 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 LGALS7P47929 136 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 SPCS3P61009 180 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 RAB11AP62491 216 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 CCL20P78556 96 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 NDPQ00604 133 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 SLC38A11Q08AI6 406 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 HES1Q14469 280 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 HAGHQ16775 308 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 ZNF674Q2M3X9 581 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 BSXQ3C1V8 233 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 ZNF585BQ52M93 769 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 ARSJQ5FYB0 599 aaPredicted RBP4.13□□□□□ -1.75
SHMT1-211ENST00000618902 FAM209BQ5JX69 171 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 SPANXN5Q5MJ07 72 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 TEX38Q6PEX7 206 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 C10orf99Q6UWK7 81 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 KLHDC1Q8N7A1 406 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 RNF152Q8N8N0 203 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 CYB561D1Q8N8Q1 229 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 C2CD4CQ8TF44 421 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 RAB24Q969Q5 203 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 BSCL2Q96G97 398 aaPredicted RBP4.13□□□□□ -1.75
SHMT1-211ENST00000618902 OR4C12Q96R67 309 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 HSPB9Q9BQS6 159 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 MCRIP2Q9BUT9 160 aaKnown RBP4.13□□□□□ -1.75
SHMT1-211ENST00000618902 TPSG1Q9NRR2 321 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 PGPEP1Q9NXJ5 209 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 FKBP11Q9NYL4 201 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 DOK5Q9P104 306 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 GNG13Q9P2W3 67 aa4.13□□□□□ -1.75
SHMT1-211ENST00000618902 A0A1W2PPV4 95 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 MAP1LC3B2A6NCE7 125 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 TSTD3H0UI37 97 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 TNFSF12O43508 249 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 RAMP3O60896 148 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 NDUFA3O95167 84 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 BRI3O95415 125 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 IGKV1-5P01602 117 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 RPLP1P05386 114 aaKnown RBP4.12□□□□□ -1.75
SHMT1-211ENST00000618902 PFN1P07737 140 aaKnown RBP4.12□□□□□ -1.75
SHMT1-211ENST00000618902 EGR2P11161 476 aaPredicted RBP4.12□□□□□ -1.75
SHMT1-211ENST00000618902 NQO2P16083 231 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 OPRK1P41145 380 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 THBS3P49746 956 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 NDUFA6P56556 154 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 ERVK-16P61578 105 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms