RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 TMEM61Q8N0U2 210 aa15.12■□□□□ 0.01
SSBP4-210ENST00000601444 TMEM116Q8NCL8 245 aa15.12■□□□□ 0.01
SSBP4-210ENST00000601444 MARC2Q969Z3 335 aa15.12■□□□□ 0.01
SSBP4-210ENST00000601444 ZFAND3Q9H8U3 227 aa15.12■□□□□ 0.01
SSBP4-210ENST00000601444 RAB11AP62491 216 aa15.11■□□□□ 0.01
SSBP4-210ENST00000601444 MARVELD1Q9BSK0 173 aa15.11■□□□□ 0.01
SSBP4-210ENST00000601444 IGHV3OR16-13A0A075B7E8 117 aa15.1■□□□□ 0.01
SSBP4-210ENST00000601444 IGHV3-74A0A0B4J1X5 117 aa15.1■□□□□ 0.01
SSBP4-210ENST00000601444 C5orf51A6NDU8 294 aa15.1■□□□□ 0.01
SSBP4-210ENST00000601444 SCAF4O95104 1147 aaKnown RBP15.1■□□□□ 0.01
SSBP4-210ENST00000601444 MBPP02686 304 aaPredicted RBP15.1■□□□□ 0.01
SSBP4-210ENST00000601444 OR10J1P30954 320 aa15.1■□□□□ 0.01
SSBP4-210ENST00000601444 GAMTQ14353 236 aa15.1■□□□□ 0.01
SSBP4-210ENST00000601444 GUCA2BQ16661 112 aa15.1■□□□□ 0.01
SSBP4-210ENST00000601444 PSENENQ9NZ42 101 aa15.1■□□□□ 0.01
SSBP4-210ENST00000601444 SMPXQ9UHP9 88 aa15.1■□□□□ 0.01
SSBP4-210ENST00000601444 TRAV30A0A087WSZ9 112 aa15.09■□□□□ 0.01
SSBP4-210ENST00000601444 TRAV14DV4A0A0A6YYC5 116 aa15.09■□□□□ 0.01
SSBP4-210ENST00000601444 IGHV7-4-1A0A0J9YVY3 117 aa15.09■□□□□ 0.01
SSBP4-210ENST00000601444 PRSS46E5RG02 174 aa15.09■□□□□ 0.01
SSBP4-210ENST00000601444 APOHP02749 345 aaPredicted RBP15.09■□□□□ 0.01
SSBP4-210ENST00000601444 GPX4P36969 197 aaPredicted RBP15.09■□□□□ 0.01
SSBP4-210ENST00000601444 RPP30P78346 268 aaKnown RBP15.09■□□□□ 0.01
SSBP4-210ENST00000601444 OR1S2Q8NGQ3 325 aa15.09■□□□□ 0.01
SSBP4-210ENST00000601444 GPN1Q9HCN4 374 aaPredicted RBP15.09■□□□□ 0.01
SSBP4-210ENST00000601444 RCL1Q9Y2P8 373 aaKnown RBP15.09■□□□□ 0.01
SSBP4-210ENST00000601444 STRAPQ9Y3F4 350 aaKnown RBP15.09■□□□□ 0.01
SSBP4-210ENST00000601444 SMAD5-AS1Q9Y6J3 95 aa15.09■□□□□ 0.01
SSBP4-210ENST00000601444 SMIM8Q96KF7 97 aa15.08■□□□□ 0
SSBP4-210ENST00000601444 C2orf50Q96LR7 162 aa15.08■□□□□ 0
SSBP4-210ENST00000601444 RHPN1-AS1Q9BWJ2 59 aa15.08■□□□□ 0
SSBP4-210ENST00000601444 SORL1Q92673 2214 aa15.07■□□□□ 0
SSBP4-210ENST00000601444 IGHV3-66A0A0C4DH42 116 aa15.07■□□□□ 0
SSBP4-210ENST00000601444 SNRPGP15A8MWD9 76 aa15.07■□□□□ 0
SSBP4-210ENST00000601444 CHEK1O14757 476 aa15.07■□□□□ 0
SSBP4-210ENST00000601444 CCNKO75909 580 aa15.07■□□□□ 0
SSBP4-210ENST00000601444 CD7P09564 240 aa15.07■□□□□ 0
SSBP4-210ENST00000601444 GSG1LQ6UXU4 331 aa15.07■□□□□ 0
SSBP4-210ENST00000601444 LILRB2Q8N423 598 aa15.07■□□□□ 0
SSBP4-210ENST00000601444 SLC35E1Q96K37 410 aa15.07■□□□□ 0
SSBP4-210ENST00000601444 RNF2Q99496 336 aa15.07■□□□□ 0
SSBP4-210ENST00000601444 TGP01266 2768 aa15.07■□□□□ 0
SSBP4-210ENST00000601444 DNAH9Q9NYC9 4486 aa15.06■□□□□ 0
SSBP4-210ENST00000601444 IGKV1D-37A0A075B6S9 117 aa15.06■□□□□ 0
SSBP4-210ENST00000601444 C7orf66A4D0T2 115 aa15.06■□□□□ 0
SSBP4-210ENST00000601444 PMS2P5A8MQ11 134 aa15.06■□□□□ 0
SSBP4-210ENST00000601444 PRAF2O60831 178 aa15.06■□□□□ 0
SSBP4-210ENST00000601444 SIX6O95475 246 aa15.06■□□□□ 0
SSBP4-210ENST00000601444 YPEL3P61236 119 aaPredicted RBP15.06■□□□□ 0
SSBP4-210ENST00000601444 RBPMS2Q6ZRY4 209 aaKnown RBP15.06■□□□□ 0
SSBP4-210ENST00000601444 GINS3Q9BRX5 216 aa15.06■□□□□ 0
SSBP4-210ENST00000601444 LSM5Q9Y4Y9 91 aaKnown RBP15.06■□□□□ 0
SSBP4-210ENST00000601444 K7EPK0 472 aa15.05■□□□□ -0
SSBP4-210ENST00000601444 SCGB2A1O75556 95 aa15.05■□□□□ -0
SSBP4-210ENST00000601444 IGHV4-30-4P0DP06 118 aa15.05■□□□□ -0
SSBP4-210ENST00000601444 CD81P60033 236 aa15.05■□□□□ -0
SSBP4-210ENST00000601444 ZNF90Q03938 601 aa15.05■□□□□ -0
SSBP4-210ENST00000601444 IL15RAQ13261 267 aa15.05■□□□□ -0
SSBP4-210ENST00000601444 DCTN2Q13561 401 aaKnown RBP15.05■□□□□ -0
SSBP4-210ENST00000601444 GTSCR1Q86UQ5 136 aa15.05■□□□□ -0
SSBP4-210ENST00000601444 Q8WTZ3 238 aa15.05■□□□□ -0
SSBP4-210ENST00000601444 ST8SIA2Q92186 375 aa15.05■□□□□ -0
SSBP4-210ENST00000601444 RAB40CQ96S21 281 aa15.05■□□□□ -0
SSBP4-210ENST00000601444 B9D2Q9BPU9 175 aa15.05■□□□□ -0
SSBP4-210ENST00000601444 NEURL2Q9BR09 285 aa15.05■□□□□ -0
SSBP4-210ENST00000601444 IGKV1OR2-108A0A075B7D4 117 aa15.04■□□□□ -0
SSBP4-210ENST00000601444 TRAV25A0A0B4J276 109 aa15.04■□□□□ -0
SSBP4-210ENST00000601444 ZFP92A6NM28 416 aa15.04■□□□□ -0
SSBP4-210ENST00000601444 GOSR2O14653 212 aa15.04■□□□□ -0
SSBP4-210ENST00000601444 METTL15P1P0C7V9 234 aa15.04■□□□□ -0
SSBP4-210ENST00000601444 RD3LP0DJH9 198 aa15.04■□□□□ -0
SSBP4-210ENST00000601444 PSG1P11464 419 aa15.04■□□□□ -0
SSBP4-210ENST00000601444 OR8G2PQ6IF36 304 aa15.04■□□□□ -0
SSBP4-210ENST00000601444 TMEM14EPQ6UXP3 125 aa15.04■□□□□ -0
SSBP4-210ENST00000601444 ASCL2Q99929 193 aa15.04■□□□□ -0
SSBP4-210ENST00000601444 WFDC10AQ9H1F0 79 aa15.04■□□□□ -0
SSBP4-210ENST00000601444 TOMM40O96008 361 aa15.03■□□□□ -0
SSBP4-210ENST00000601444 FRMD6-AS1P0C7T7 363 aa15.03■□□□□ -0
SSBP4-210ENST00000601444 NPPCP23582 126 aa15.03■□□□□ -0
SSBP4-210ENST00000601444 TAS2R30P59541 319 aa15.03■□□□□ -0
SSBP4-210ENST00000601444 USF2Q15853 346 aaPredicted RBP15.03■□□□□ -0
SSBP4-210ENST00000601444 ACOT7LQ6ZUV0 252 aa15.03■□□□□ -0
SSBP4-210ENST00000601444 C11orf1Q9H5F2 150 aa15.03■□□□□ -0
SSBP4-210ENST00000601444 VSIRQ9H7M9 311 aa15.03■□□□□ -0
SSBP4-210ENST00000601444 IGKV3-7A0A075B6H7 116 aa15.02■□□□□ -0
SSBP4-210ENST00000601444 TSPAN4O14817 238 aa15.02■□□□□ -0
SSBP4-210ENST00000601444 TSC22D2O75157 780 aa15.02■□□□□ -0
SSBP4-210ENST00000601444 IL4P05112 153 aa15.02■□□□□ -0
SSBP4-210ENST00000601444 CRYBB3P26998 211 aa15.02■□□□□ -0
SSBP4-210ENST00000601444 ARL16Q0P5N6 197 aa15.02■□□□□ -0
SSBP4-210ENST00000601444 RAB32Q13637 225 aa15.02■□□□□ -0
SSBP4-210ENST00000601444 FAM90A2PQ658T7 463 aa15.02■□□□□ -0
SSBP4-210ENST00000601444 LAMTOR1Q6IAA8 161 aa15.02■□□□□ -0
SSBP4-210ENST00000601444 METTL26Q96S19 204 aa15.02■□□□□ -0
SSBP4-210ENST00000601444 L7N2F9 121 aa15.01□□□□□ -0.01
SSBP4-210ENST00000601444 S100A10P60903 97 aa15.01□□□□□ -0.01
SSBP4-210ENST00000601444 RRAS2P62070 204 aaPredicted RBP15.01□□□□□ -0.01
SSBP4-210ENST00000601444 VAMP2P63027 116 aa15.01□□□□□ -0.01
SSBP4-210ENST00000601444 OR2F1Q13607 317 aa15.01□□□□□ -0.01
SSBP4-210ENST00000601444 DEFB125Q8N687 156 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms