RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 C9orf85Q96MD7 179 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 ATP6V0BQ99437 205 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 HSD17B10Q99714 261 aaKnown RBP2.55□□□□□ -2
CKS1BP3-201ENST00000600888 B9D2Q9BPU9 175 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 GINS4Q9BRT9 223 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 PAXXQ9BUH6 204 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 AUNIPQ9H7T9 357 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 DIABLOQ9NR28 239 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 SIGLEC8Q9NYZ4 499 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 ZNF230Q9UIE0 474 aaPredicted RBP2.55□□□□□ -2
CKS1BP3-201ENST00000600888 RBMX2Q9Y388 322 aaKnown RBP2.55□□□□□ -2
CKS1BP3-201ENST00000600888 PRELID3BQ9Y3B1 194 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 RRP15Q9Y3B9 282 aaKnown RBP2.55□□□□□ -2
CKS1BP3-201ENST00000600888 A0A075B6Q4 140 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 A0A087WXM4 84 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 TRBV9A0A0B4J1U6 114 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 IGKV1D-13A0A0B4J2D9 117 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 LOC100506127A0A0U1RQW1 187 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 TMEM235A6NFC5 223 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 AIREO43918 545 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 CNIH1O95406 144 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 CRYZL1O95825 349 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 IGKV1-13P0DP09 117 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 ZP3P21754 424 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 NFYAP23511 347 aaPredicted RBP2.54□□□□□ -2
CKS1BP3-201ENST00000600888 MAS1LP35410 378 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 TPPP2P59282 170 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 KRTAP12-2P59991 146 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 RPL30P62888 115 aaKnown RBP2.54□□□□□ -2
CKS1BP3-201ENST00000600888 MXD1Q05195 221 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 PJVKQ0ZLH3 352 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 CDK10Q15131 360 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 POU2AF1Q16633 256 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 PRSS8Q16651 343 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 DEFB121Q5J5C9 76 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 VAX1Q5SQQ9 334 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 IDNKQ5T6J7 187 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 ATRAIDQ6UW56 229 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 C2orf66Q6UXQ4 117 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 PUSL1Q8N0Z8 303 aaKnown RBP2.54□□□□□ -2
CKS1BP3-201ENST00000600888 TTC9CQ8N5M4 171 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 ARL6IP6Q8N6S5 226 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 OR5H6Q8NGV6 325 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 TMEM167AQ8TBQ9 72 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 SRSF12Q8WXF0 261 aaKnown RBP2.54□□□□□ -2
CKS1BP3-201ENST00000600888 ACOT12Q8WYK0 555 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 MAFIPQ8WZ33 124 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 DCUN1D4Q92564 292 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 DLX4Q92988 240 aaPredicted RBP2.54□□□□□ -2
CKS1BP3-201ENST00000600888 BORCS5Q969J3 196 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 S100A16Q96FQ6 103 aaKnown RBP2.54□□□□□ -2
CKS1BP3-201ENST00000600888 ZNF414Q96IQ9 312 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 USMG5Q96IX5 58 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 SPIN2AQ99865 258 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 SPIN2BQ9BPZ2 258 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 FAM103A1Q9BTL3 118 aaKnown RBP2.54□□□□□ -2
CKS1BP3-201ENST00000600888 RNF167Q9H6Y7 350 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 VCX3AQ9NNX9 186 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 ANAPC10Q9UM13 185 aa2.54□□□□□ -2
CKS1BP3-201ENST00000600888 MRPS7Q9Y2R9 242 aaKnown RBP2.54□□□□□ -2
CKS1BP3-201ENST00000600888 RBM7Q9Y580 266 aaKnown RBP2.54□□□□□ -2
CKS1BP3-201ENST00000600888 FAM223BA6NKX1 122 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 SULT1C2O00338 296 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 OR2A4O95047 310 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 HPRT1P00492 218 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 HRASP01112 189 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 PPYP01298 95 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 IGLV1-51P01701 117 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 APOA1P02647 267 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 TRGV3P03979 118 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 CRYGCP07315 174 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 ZNF735P0CB33 412 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 SAA1P0DJI8 122 aaPredicted RBP2.53□□□□□ -2
CKS1BP3-201ENST00000600888 GNRHRP30968 328 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 KIR2DS2P43631 304 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 RAB25P57735 213 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 TAS2R31P59538 309 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 ARPC4P59998 168 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 CATR1Q13166 79 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 NEDD8Q15843 81 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 TNXAQ16473 311 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 TATDN3Q17R31 274 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 UBE2NLQ5JXB2 153 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 THOC7Q6I9Y2 204 aaKnown RBP2.53□□□□□ -2
CKS1BP3-201ENST00000600888 FAM223AQ8IWN6 122 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 NECAP1Q8NC96 275 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 OR5T1Q8NG75 326 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 OR6Q1Q8NGQ2 317 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 OR13F1Q8NGS4 319 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 OR2K2Q8NGT1 345 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 OR4S2Q8NH73 311 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 OR4A5Q8NH83 315 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 GRPEL2Q8TAA5 225 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 CD300LFQ8TDQ1 290 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 GPX8Q8TED1 209 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 TMEM37Q8WXS4 190 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 SLC25A46Q96AG3 418 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 OR5B12Q96R08 314 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 OR2A7Q96R45 310 aa2.53□□□□□ -2
CKS1BP3-201ENST00000600888 CLCC1Q96S66 551 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms