RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 FGL1Q08830 312 aa12.64□□□□□ -0.39
SHKBP1-219ENST00000599575 KPRPQ5T749 579 aaPredicted RBP12.64□□□□□ -0.39
SHKBP1-219ENST00000599575 STX12Q86Y82 276 aa12.64□□□□□ -0.39
SHKBP1-219ENST00000599575 NPIPB3Q92617 1050 aa12.64□□□□□ -0.39
SHKBP1-219ENST00000599575 GINS3Q9BRX5 216 aa12.64□□□□□ -0.39
SHKBP1-219ENST00000599575 SLC25A31Q9H0C2 315 aa12.64□□□□□ -0.39
SHKBP1-219ENST00000599575 DAZ1Q9NQZ3 744 aaKnown RBP12.64□□□□□ -0.39
SHKBP1-219ENST00000599575 PMS2P5A8MQ11 134 aa12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 SAP30O75446 220 aa12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 MPC2O95563 127 aa12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 CFDP00746 253 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 IGKV1-17P01599 117 aa12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 GIPP09681 153 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 CXCL3P19876 107 aa12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 SULT1A1P50225 295 aa12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 BCAP31P51572 246 aa12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 HBG1P69891 147 aa12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 HBG2P69892 147 aa12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 FCN2Q15485 313 aa12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 ACY3Q96HD9 319 aa12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 MRPL36Q9P0J6 103 aaKnown RBP12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 MRPL27Q9P0M9 148 aaKnown RBP12.63□□□□□ -0.39
SHKBP1-219ENST00000599575 NOTCH3Q9UM47 2321 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 METTL15P1P0C7V9 234 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 S100A11P31949 105 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 RAP2BP61225 183 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 BAXQ07812 192 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 EGFEM1PQ0D2K5 195 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 OR8G2PQ6IF36 304 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 IL34Q6ZMJ4 242 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 ACOT7LQ6ZUV0 252 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 TMEM144Q7Z5S9 345 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 TMEM252Q8N6L7 170 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 THAP8Q8NA92 274 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 OR11H7Q8NGC8 314 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 OR2K2Q8NGT1 345 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 Q8WTZ3 238 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 NPVFQ9HCQ7 196 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 ZC4H2Q9NQZ6 224 aa12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 TECRQ9NZ01 308 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-219ENST00000599575 FBN3Q75N90 2809 aa12.61□□□□□ -0.39
SHKBP1-219ENST00000599575 C2orf70A6NJV1 201 aa12.61□□□□□ -0.39
SHKBP1-219ENST00000599575 ZFP92A6NM28 416 aa12.61□□□□□ -0.39
SHKBP1-219ENST00000599575 CSN3P07498 182 aa12.61□□□□□ -0.39
SHKBP1-219ENST00000599575 C8orf88P0DMB2 117 aa12.61□□□□□ -0.39
SHKBP1-219ENST00000599575 BMI1P35226 326 aa12.61□□□□□ -0.39
SHKBP1-219ENST00000599575 ATP6V1FQ16864 119 aa12.61□□□□□ -0.39
SHKBP1-219ENST00000599575 LRRC37A5PQ49AS3 106 aa12.61□□□□□ -0.39
SHKBP1-219ENST00000599575 OXLD1Q5BKU9 147 aa12.61□□□□□ -0.39
SHKBP1-219ENST00000599575 TRGV9Q99603 122 aa12.61□□□□□ -0.39
SHKBP1-219ENST00000599575 NOTCH1P46531 2555 aa12.61□□□□□ -0.39
SHKBP1-219ENST00000599575 TMEM213A2RRL7 107 aa12.6□□□□□ -0.39
SHKBP1-219ENST00000599575 YIF1AO95070 293 aa12.6□□□□□ -0.39
SHKBP1-219ENST00000599575 TOMM40O96008 361 aa12.6□□□□□ -0.39
SHKBP1-219ENST00000599575 IGLV1-51P01701 117 aa12.6□□□□□ -0.39
SHKBP1-219ENST00000599575 CD5P06127 495 aa12.6□□□□□ -0.39
SHKBP1-219ENST00000599575 RD3LP0DJH9 198 aa12.6□□□□□ -0.39
SHKBP1-219ENST00000599575 LYL1P12980 280 aa12.6□□□□□ -0.39
SHKBP1-219ENST00000599575 FOLR2P14207 255 aa12.6□□□□□ -0.39
SHKBP1-219ENST00000599575 CBLN1P23435 193 aa12.6□□□□□ -0.39
SHKBP1-219ENST00000599575 TOMM20LQ6UXN7 152 aa12.6□□□□□ -0.39
SHKBP1-219ENST00000599575 UNQ9165/PRO28630Q6UXU0 137 aa12.6□□□□□ -0.39
SHKBP1-219ENST00000599575 THAP6Q8TBB0 222 aa12.6□□□□□ -0.39
SHKBP1-219ENST00000599575 PUS1Q9Y606 427 aaKnown RBP eCLIP12.6□□□□□ -0.39
SHKBP1-219ENST00000599575 IGHV3-35A0A0C4DH35 117 aa12.59□□□□□ -0.39
SHKBP1-219ENST00000599575 FAM24AA6NFZ4 105 aa12.59□□□□□ -0.39
SHKBP1-219ENST00000599575 G3V4G9 280 aa12.59□□□□□ -0.39
SHKBP1-219ENST00000599575 H0YIZ8 118 aa12.59□□□□□ -0.39
SHKBP1-219ENST00000599575 SELENOTP62341 195 aa12.59□□□□□ -0.39
SHKBP1-219ENST00000599575 AKR1C1Q04828 323 aa12.59□□□□□ -0.39
SHKBP1-219ENST00000599575 BEAN1Q3B7T3 259 aa12.59□□□□□ -0.39
SHKBP1-219ENST00000599575 TIGITQ495A1 244 aa12.59□□□□□ -0.39
SHKBP1-219ENST00000599575 RNF126Q9BV68 326 aa12.59□□□□□ -0.39
SHKBP1-219ENST00000599575 OR5AC2Q9NZP5 309 aa12.59□□□□□ -0.39
SHKBP1-219ENST00000599575 PFDN2Q9UHV9 154 aa12.59□□□□□ -0.39
SHKBP1-219ENST00000599575 TRAV14DV4A0A0A6YYC5 116 aa12.58□□□□□ -0.4
SHKBP1-219ENST00000599575 S100A7P31151 101 aa12.58□□□□□ -0.4
SHKBP1-219ENST00000599575 NUP62P37198 522 aaPredicted RBP12.58□□□□□ -0.4
SHKBP1-219ENST00000599575 SLC38A11Q08AI6 406 aa12.58□□□□□ -0.4
SHKBP1-219ENST00000599575 VWC2Q2TAL6 325 aa12.58□□□□□ -0.4
SHKBP1-219ENST00000599575 TEPPQ6URK8 271 aa12.58□□□□□ -0.4
SHKBP1-219ENST00000599575 OR51G1Q8NGK1 321 aa12.58□□□□□ -0.4
SHKBP1-219ENST00000599575 C20orf24Q9BUV8 137 aa12.58□□□□□ -0.4
SHKBP1-219ENST00000599575 ZFAND3Q9H8U3 227 aa12.58□□□□□ -0.4
SHKBP1-219ENST00000599575 IGKV1D-37A0A075B6S9 117 aa12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 A0A1W2PS18 150 aa12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 IGSF23A1L1A6 192 aa12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 CST7O76096 145 aa12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 RAB31Q13636 194 aa12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 TM4SF20Q53R12 229 aa12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 LCN12Q6JVE5 192 aa12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 Q6ZNX1 250 aa12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 HAPLN4Q86UW8 402 aa12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 LILRB2Q8N423 598 aa12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 DYNLRB2Q8TF09 96 aa12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 NARS2Q96I59 477 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 ZNF414Q96IQ9 312 aa12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 METTL26Q96S19 204 aa12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 TMEM231Q9H6L2 316 aa12.57□□□□□ -0.4
SHKBP1-219ENST00000599575 UQCC1Q9NVA1 299 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms