RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 HOXA1P49639 335 aaPredicted RBP9.79□□□□□ -0.84
CLPTM1-208ENST00000588274 C1QTNF4Q9BXJ3 329 aa9.79□□□□□ -0.84
CLPTM1-208ENST00000588274 NRN1Q9NPD7 142 aa9.79□□□□□ -0.84
CLPTM1-208ENST00000588274 DKK2Q9UBU2 259 aa9.79□□□□□ -0.84
CLPTM1-208ENST00000588274 UCP1P25874 307 aa9.78□□□□□ -0.84
CLPTM1-208ENST00000588274 S100GP29377 79 aa9.78□□□□□ -0.84
CLPTM1-208ENST00000588274 RND2P52198 227 aa9.78□□□□□ -0.84
CLPTM1-208ENST00000588274 AKR1C2P52895 323 aa9.78□□□□□ -0.84
CLPTM1-208ENST00000588274 PIGPP57054 158 aa9.78□□□□□ -0.84
CLPTM1-208ENST00000588274 YPEL3P61236 119 aaPredicted RBP9.78□□□□□ -0.84
CLPTM1-208ENST00000588274 DHODHQ02127 395 aa9.78□□□□□ -0.84
CLPTM1-208ENST00000588274 LHFPL5Q8TAF8 219 aa9.78□□□□□ -0.84
CLPTM1-208ENST00000588274 TMEM230Q96A57 120 aa9.78□□□□□ -0.84
CLPTM1-208ENST00000588274 YIPF6Q96EC8 236 aa9.78□□□□□ -0.84
CLPTM1-208ENST00000588274 ZNF486Q96H40 463 aaPredicted RBP9.78□□□□□ -0.84
CLPTM1-208ENST00000588274 FAM210BQ96KR6 192 aa9.78□□□□□ -0.84
CLPTM1-208ENST00000588274 C3orf85A0A1B0GTC6 90 aa9.77□□□□□ -0.85
CLPTM1-208ENST00000588274 SOCS3O14543 225 aa9.77□□□□□ -0.85
CLPTM1-208ENST00000588274 SPART-AS1P0CW21 52 aa9.77□□□□□ -0.85
CLPTM1-208ENST00000588274 NKX2-1P43699 371 aaPredicted RBP9.77□□□□□ -0.85
CLPTM1-208ENST00000588274 SUB1P53999 127 aaKnown RBP eCLIP9.77□□□□□ -0.85
CLPTM1-208ENST00000588274 SP6Q3SY56 376 aa9.77□□□□□ -0.85
CLPTM1-208ENST00000588274 RNF212Q495C1 297 aa9.77□□□□□ -0.85
CLPTM1-208ENST00000588274 SNX29P2Q8IUI4 249 aa9.77□□□□□ -0.85
CLPTM1-208ENST00000588274 OR1S2Q8NGQ3 325 aa9.77□□□□□ -0.85
CLPTM1-208ENST00000588274 PLA2G2EQ9NZK7 142 aa9.77□□□□□ -0.85
CLPTM1-208ENST00000588274 TRAV30A0A087WSZ9 112 aa9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 CDK2AP2O75956 126 aa9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 APOA1P02647 267 aa9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 IL4P05112 153 aa9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 NPY1RP25929 384 aa9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 OR10J1P30954 320 aa9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 NUTF2P61970 127 aaKnown RBP9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 C2orf83Q53S99 150 aa9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 FAM222AQ5U5X8 452 aa9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 SIGLEC15Q6ZMC9 328 aa9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 CENPSQ8N2Z9 138 aa9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 OR4D10Q8NGI6 311 aa9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 NARS2Q96I59 477 aaKnown RBP9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 CLUHP3Q96NS8 147 aa9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 WDR12Q9GZL7 423 aaKnown RBP9.76□□□□□ -0.85
CLPTM1-208ENST00000588274 TMEM189A5PLL7 270 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 SMIM9A6NGZ8 99 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 TOMM40O96008 361 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 IFNA10P01566 189 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 ELK1P19419 428 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 EIF2B2P49770 351 aaKnown RBP9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 AP2S1P53680 142 aaPredicted RBP9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 EMP1P54849 157 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 SPCS3P61009 180 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 LSM3P62310 102 aaKnown RBP9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 SNRPD3P62318 126 aaKnown RBP9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 TNP2Q05952 138 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 OXA1LQ15070 435 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 ZNF79Q15937 498 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 GSG1LQ6UXU4 331 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 C1orf158Q8N1D5 194 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 OR52E5Q8NH55 327 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 SAV1Q9H4B6 383 aaPredicted RBP9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 KLK11Q9UBX7 282 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 RFNGQ9Y644 331 aa9.75□□□□□ -0.85
CLPTM1-208ENST00000588274 CD3DP04234 171 aa9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 SLC25A4P12235 298 aa9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 PGAM2P15259 253 aa9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 HTR2BP41595 481 aa9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 FXYD7P58549 80 aa9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 C1orf134Q5TEV5 83 aa9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 UBE2DNLQ8IWF7 75 aa9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 ARRDC1Q8N5I2 433 aa9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 SLC24A4Q8NFF2 622 aa9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 OR13C8Q8NGS7 320 aa9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 RNASEH2CQ8TDP1 164 aaKnown RBP9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 Q8WTZ3 238 aa9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 NIPSNAP3BQ9BS92 247 aa9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 PDCD10Q9BUL8 212 aa9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 SLC35B3Q9H1N7 401 aa9.74□□□□□ -0.85
CLPTM1-208ENST00000588274 RPS10-NUDT3A0A1W2PQS6 291 aa9.73□□□□□ -0.85
CLPTM1-208ENST00000588274 A8MTW9 85 aa9.73□□□□□ -0.85
CLPTM1-208ENST00000588274 SCGB2A1O75556 95 aa9.73□□□□□ -0.85
CLPTM1-208ENST00000588274 ATP6V1G2O95670 118 aa9.73□□□□□ -0.85
CLPTM1-208ENST00000588274 CDS2O95674 445 aa9.73□□□□□ -0.85
CLPTM1-208ENST00000588274 IFNA21P01568 189 aa9.73□□□□□ -0.85
CLPTM1-208ENST00000588274 TRIM16LQ309B1 348 aa9.73□□□□□ -0.85
CLPTM1-208ENST00000588274 TMEM88Q6PEY1 159 aa9.73□□□□□ -0.85
CLPTM1-208ENST00000588274 NPIPB3Q92617 1050 aa9.73□□□□□ -0.85
CLPTM1-208ENST00000588274 C17orf77Q96MU5 243 aa9.73□□□□□ -0.85
CLPTM1-208ENST00000588274 TMEM222Q9H0R3 208 aa9.73□□□□□ -0.85
CLPTM1-208ENST00000588274 COMMD3Q9UBI1 195 aa9.73□□□□□ -0.85
CLPTM1-208ENST00000588274 IGKV1D-37A0A075B6S9 117 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 TEX48A0A1B0GUV7 120 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 HPGDSO60760 199 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 ATG12O94817 140 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 IGKV3-20P01619 116 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 OR5AC1P0C628 307 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 PSG1P11464 419 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 PAX9P55771 341 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 NCS1P62166 190 aa9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 RNASE12Q5GAN4 147 aaKnown RBP9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 RNASE10Q5GAN6 216 aaKnown RBP9.72□□□□□ -0.85
CLPTM1-208ENST00000588274 NMSQ5H8A3 153 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms