RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 DYNC2LI1Q8TCX1 351 aa2.93□□□□□ -1.94
DDX42-211ENST00000580108 LSM10Q969L4 123 aaKnown RBP2.93□□□□□ -1.94
DDX42-211ENST00000580108 RNF2Q99496 336 aa2.93□□□□□ -1.94
DDX42-211ENST00000580108 RTBDNQ9BSG5 229 aaPredicted RBP2.93□□□□□ -1.94
DDX42-211ENST00000580108 MRPS26Q9BYN8 205 aaKnown RBP2.93□□□□□ -1.94
DDX42-211ENST00000580108 RBM38Q9H0Z9 239 aaKnown RBP2.93□□□□□ -1.94
DDX42-211ENST00000580108 FNDC4Q9H6D8 234 aaPredicted RBP2.93□□□□□ -1.94
DDX42-211ENST00000580108 SCPEP1Q9HB40 452 aa2.93□□□□□ -1.94
DDX42-211ENST00000580108 PALMDQ9NP74 551 aa2.93□□□□□ -1.94
DDX42-211ENST00000580108 TMEM14BQ9NUH8 114 aa2.93□□□□□ -1.94
DDX42-211ENST00000580108 SLC2A8Q9NY64 477 aa2.93□□□□□ -1.94
DDX42-211ENST00000580108 C21orf62Q9NYP8 219 aa2.93□□□□□ -1.94
DDX42-211ENST00000580108 SIGLEC8Q9NYZ4 499 aa2.93□□□□□ -1.94
DDX42-211ENST00000580108 MTFP1Q9UDX5 166 aa2.93□□□□□ -1.94
DDX42-211ENST00000580108 PRNDQ9UKY0 176 aa2.93□□□□□ -1.94
DDX42-211ENST00000580108 TRBV7-1A0A0A6YYK4 115 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 LCE6AA0A183 80 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 C3orf85A0A1B0GTC6 90 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 H3BMQ9 156 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 CHEK1O14757 476 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 DEFB4AO15263 64 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 NUPL2O15504 423 aaKnown RBP2.92□□□□□ -1.94
DDX42-211ENST00000580108 YIF1AO95070 293 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 RAB3DO95716 219 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 DHFRP00374 187 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 CD74P04233 296 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 IFNA6P05013 189 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 OR5AC1P0C628 307 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 AKR1C2P52895 323 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 DEFB1P60022 68 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 RND3P61587 244 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 HSPE1P61604 102 aaKnown RBP2.92□□□□□ -1.94
DDX42-211ENST00000580108 PRCDQ00LT1 54 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 TIGITQ495A1 244 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 LEMD1Q68G75 181 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 DGAT2L7PQ6IED9 249 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 STEAP1BQ6NZ63 245 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 TOMM20LQ6UXN7 152 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 SELENOHQ8IZQ5 122 aaKnown RBP2.92□□□□□ -1.94
DDX42-211ENST00000580108 TMEM229BQ8NBD8 167 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 OR51S1Q8NGJ8 323 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 OR1L6Q8NGR2 347 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 OR2K2Q8NGT1 345 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 CD300LFQ8TDQ1 290 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 VN1R17PQ8TDU5 208 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 TMEM170AQ8WVE7 144 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 TMEM230Q96A57 120 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 GPR146Q96CH1 333 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 ISOC1Q96CN7 298 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 BSCL2Q96G97 398 aaPredicted RBP2.92□□□□□ -1.94
DDX42-211ENST00000580108 DIRAS2Q96HU8 199 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 CXorf58Q96LI9 332 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 OVOL2Q9BRP0 275 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 GGTLC1Q9BX51 225 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 C6orf62Q9GZU0 229 aaPredicted RBP2.92□□□□□ -1.94
DDX42-211ENST00000580108 C5orf66Q9H5L9 145 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 AAMDCQ9H7C9 122 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 TECRQ9NZ01 308 aaKnown RBP2.92□□□□□ -1.94
DDX42-211ENST00000580108 SMPXQ9UHP9 88 aa2.92□□□□□ -1.94
DDX42-211ENST00000580108 HERC2O95714 4834 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 LOC102724200A0A096LPH7 203 aaPredicted RBP2.91□□□□□ -1.94
DDX42-211ENST00000580108 IGHV7-4-1A0A0J9YVY3 117 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 A0A0J9YWU9 116 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 ANKRD20A5PA0PJZ0 165 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 KNCNA6PVL3 124 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 NDUFA4O00483 81 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 DFFBO76075 338 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 IFNA17P01571 189 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 PRB4P10163 310 aaPredicted RBP2.91□□□□□ -1.94
DDX42-211ENST00000580108 UCP1P25874 307 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 TNFSF8P32971 234 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 PCP4P48539 62 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 HOXA1P49639 335 aaPredicted RBP2.91□□□□□ -1.94
DDX42-211ENST00000580108 MFAP4P55083 255 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 TAS2R19P59542 299 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 IL18Q14116 193 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 TMEM187Q14656 261 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 TRIM16LQ309B1 348 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 TMEM268Q5VZI3 342 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 FAM90A2PQ658T7 463 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 RBPMS2Q6ZRY4 209 aaKnown RBP2.91□□□□□ -1.94
DDX42-211ENST00000580108 TCF24Q7RTU0 167 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 SLC16A13Q7RTY0 426 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 SLC35G3Q8N808 338 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 TMEM116Q8NCL8 245 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 OR1P1Q8NH06 330 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 TERB2Q8NHR7 220 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 RNASE11Q8TAA1 199 aaKnown RBP2.91□□□□□ -1.94
DDX42-211ENST00000580108 GLYATL2Q8WU03 294 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 SMIM4Q8WVI0 70 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 TMEM56Q96MV1 263 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 CMTM3Q96MX0 182 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 SRSF8Q9BRL6 282 aaKnown RBP2.91□□□□□ -1.94
DDX42-211ENST00000580108 RHPN1-AS1Q9BWJ2 59 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 SLIRPQ9GZT3 109 aaKnown RBP2.91□□□□□ -1.94
DDX42-211ENST00000580108 NXF2Q9GZY0 626 aaKnown RBP2.91□□□□□ -1.94
DDX42-211ENST00000580108 TMEM222Q9H0R3 208 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 NAA60Q9H7X0 242 aa2.91□□□□□ -1.94
DDX42-211ENST00000580108 DAZ1Q9NQZ3 744 aaKnown RBP2.91□□□□□ -1.94
DDX42-211ENST00000580108 MRPL27Q9P0M9 148 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms