RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 USF2Q15853 346 aaPredicted RBP6.87□□□□□ -1.31
MSI2-208ENST00000579466 SOHLH1Q5JUK2 328 aa6.87□□□□□ -1.31
MSI2-208ENST00000579466 GDF5OSQ5U4N7 250 aa6.87□□□□□ -1.31
MSI2-208ENST00000579466 FAM222AQ5U5X8 452 aa6.87□□□□□ -1.31
MSI2-208ENST00000579466 C16orf54Q6UWD8 224 aa6.87□□□□□ -1.31
MSI2-208ENST00000579466 Q8WTZ3 238 aa6.87□□□□□ -1.31
MSI2-208ENST00000579466 COMMD3Q9UBI1 195 aa6.87□□□□□ -1.31
MSI2-208ENST00000579466 LRP1BQ9NZR2 4599 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 TRAV30A0A087WSZ9 112 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 C3orf85A0A1B0GTC6 90 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 H3BMM0 161 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 P0C879 139 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 IGLC1P0CG04 106 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 OR10J1P30954 320 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 KCTD21Q4G0X4 260 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 C1orf134Q5TEV5 83 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 SIGLEC15Q6ZMC9 328 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 Q6ZR54 194 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 CROCCP3Q8IVE0 287 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 RRNAD1Q96FB5 475 aaKnown RBP6.86□□□□□ -1.31
MSI2-208ENST00000579466 ACY3Q96HD9 319 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 LINC00052Q96N35 136 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 Q9H521 79 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 NRN1Q9NPD7 142 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 HEYLQ9NQ87 328 aaPredicted RBP6.86□□□□□ -1.31
MSI2-208ENST00000579466 U3KQE9 123 aa6.86□□□□□ -1.31
MSI2-208ENST00000579466 SMIM31A0A1B0GVY4 71 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 RPS10-NUDT3A0A1W2PQS6 291 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 INS-IGF2F8WCM5 200 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 ATG12O94817 140 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 CD74P04233 296 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 HLA-DRB4P13762 266 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 AP2S1P53680 142 aaPredicted RBP6.85□□□□□ -1.31
MSI2-208ENST00000579466 UCP3P55916 312 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 RND3P61587 244 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 RNASE10Q5GAN6 216 aaKnown RBP6.85□□□□□ -1.31
MSI2-208ENST00000579466 PRSS54Q6PEW0 395 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 ZNF705AQ6ZN79 300 aaPredicted RBP6.85□□□□□ -1.31
MSI2-208ENST00000579466 OR4B1Q8NGF8 309 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 OR1S2Q8NGQ3 325 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 C7orf50Q9BRJ6 194 aaKnown RBP6.85□□□□□ -1.31
MSI2-208ENST00000579466 NIPSNAP3BQ9BS92 247 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 PBDC1Q9BVG4 233 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 COPZ2Q9P299 210 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 RFNGQ9Y644 331 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 HLA-DRB4X5D2U9 266 aa6.85□□□□□ -1.31
MSI2-208ENST00000579466 CEBPZOSA8MTT3 80 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 ZNF705FA8MVS1 300 aaPredicted RBP6.84□□□□□ -1.31
MSI2-208ENST00000579466 C16orf90A8MZG2 172 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 HPGDSO60760 199 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 TMEM127O75204 238 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 ZNF705DP0CH99 300 aaPredicted RBP6.84□□□□□ -1.31
MSI2-208ENST00000579466 ZNF705BP0CI00 300 aaPredicted RBP6.84□□□□□ -1.31
MSI2-208ENST00000579466 RPL5P46777 297 aaKnown RBP6.84□□□□□ -1.31
MSI2-208ENST00000579466 BSXQ3C1V8 233 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 SCGB2B2Q4G0G5 96 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 TMEM88Q6PEY1 159 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 MAPKAPK5-AS1Q8N8E1 139 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 SLC24A4Q8NFF2 622 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 OR51G1Q8NGK1 321 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 COQ8AQ8NI60 647 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 NPIPB3Q92617 1050 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 YTHDF1Q9BYJ9 559 aaKnown RBP6.84□□□□□ -1.31
MSI2-208ENST00000579466 WDR12Q9GZL7 423 aaKnown RBP6.84□□□□□ -1.31
MSI2-208ENST00000579466 SLC35B3Q9H1N7 401 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 SCPEP1Q9HB40 452 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 DKK2Q9UBU2 259 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 KLK11Q9UBX7 282 aa6.84□□□□□ -1.31
MSI2-208ENST00000579466 YTHDF2Q9Y5A9 579 aaKnown RBP6.84□□□□□ -1.31
MSI2-208ENST00000579466 APOBP04114 4563 aaKnown RBP6.83□□□□□ -1.32
MSI2-208ENST00000579466 LOC102723971A0A1B0GUV8 181 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 TMEM189A5PLL7 270 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 FAM25AB3EWG3 89 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 FAM25CB3EWG5 89 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 FAM25GB3EWG6 89 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 F6UB75 175 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 BUB3O43684 328 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 CD3DP04234 171 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 ELK1P19419 428 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 HTR2BP41595 481 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 RORCP51449 518 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 SPCS3P61009 180 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 YPEL3P61236 119 aaPredicted RBP6.83□□□□□ -1.32
MSI2-208ENST00000579466 TNP2Q05952 138 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 MEF2DQ14814 521 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 CCDC71LQ8N9Z2 235 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 OR4D10Q8NGI6 311 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 OR13C8Q8NGS7 320 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 MARCH1Q8TCQ1 289 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 ZNF486Q96H40 463 aaPredicted RBP6.83□□□□□ -1.32
MSI2-208ENST00000579466 NEU1Q99519 415 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 CACNG5Q9UF02 275 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 TMED3Q9Y3Q3 217 aa6.83□□□□□ -1.32
MSI2-208ENST00000579466 GSTZ1O43708 216 aaPredicted RBP6.82□□□□□ -1.32
MSI2-208ENST00000579466 ATP6V1G2O95670 118 aa6.82□□□□□ -1.32
MSI2-208ENST00000579466 TOMM40O96008 361 aa6.82□□□□□ -1.32
MSI2-208ENST00000579466 HBE1P02100 147 aa6.82□□□□□ -1.32
MSI2-208ENST00000579466 APOA1P02647 267 aa6.82□□□□□ -1.32
MSI2-208ENST00000579466 OR5AC1P0C628 307 aa6.82□□□□□ -1.32
MSI2-208ENST00000579466 RD3LP0DJH9 198 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms