RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 TMEM155Q4W5P6 130 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 OR10J3Q5JRS4 329 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 C19orf35Q6ZS72 473 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 HAPLN4Q86UW8 402 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 OR4S2Q8NH73 311 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 OR4C12Q96R67 309 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 ZNRD1Q9P1U0 126 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 FCN1O00602 326 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 HMGB3O15347 200 aaKnown RBP11.2□□□□□ -0.62
RNF43-202ENST00000577625 C3orf79P0CE67 100 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 ZNF90Q03938 601 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 ZNF841Q6ZN19 808 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 NEU4Q8WWR8 484 aaPredicted RBP11.2□□□□□ -0.62
RNF43-202ENST00000577625 WNT10AQ9GZT5 417 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 GNB4Q9HAV0 340 aa11.2□□□□□ -0.62
RNF43-202ENST00000577625 TAX1BP3O14907 124 aa11.19□□□□□ -0.62
RNF43-202ENST00000577625 ERVK-16P61578 105 aa11.19□□□□□ -0.62
RNF43-202ENST00000577625 TCF24Q7RTU0 167 aa11.19□□□□□ -0.62
RNF43-202ENST00000577625 BBC3Q96PG8 261 aaPredicted RBP11.19□□□□□ -0.62
RNF43-202ENST00000577625 COL12A1Q99715 3063 aa11.19□□□□□ -0.62
RNF43-202ENST00000577625 ARHGAP32A7KAX9 2087 aa11.19□□□□□ -0.62
RNF43-202ENST00000577625 UBE2L5PA0A1B0GUS4 154 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 A0A1W2PS18 150 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 GAGE12BA1L429 117 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 PRB1P04280 392 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 OR9G9P0C7N8 305 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 GNB1P62873 340 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 SPANXN5Q5MJ07 72 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 FAM71F2Q6NXP2 309 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 ACSM6Q6P461 480 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 TMEM14EPQ6UXP3 125 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 OR10G9Q8NGN4 311 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 OR10G8Q8NGN5 311 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 OR10G7Q8NGN6 311 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 IL36BQ9NZH7 164 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 RALYQ9UKM9 306 aaKnown RBP11.18□□□□□ -0.62
RNF43-202ENST00000577625 J3QR06 171 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 ZNF324O75467 553 aaPredicted RBP11.18□□□□□ -0.62
RNF43-202ENST00000577625 RBMXL2O75526 392 aaKnown RBP11.18□□□□□ -0.62
RNF43-202ENST00000577625 RIPPLY3P57055 190 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 C8orf31Q8N9H6 132 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 OR4P4Q8NGL7 312 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 UBTD1Q9HAC8 227 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 TNCP24821 2201 aa11.18□□□□□ -0.62
RNF43-202ENST00000577625 TRAV9-2A0A087WT02 112 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 PMCHP20382 165 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 ZNF833PQ6ZTB9 187 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 LINC00311Q8N616 119 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 BORCS7Q96B45 105 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 GNB1LQ9BYB4 327 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 SNURFLB1AK76 121 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 CT45A6P0DMU7 189 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 CT45A5P0DMU8 189 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 CT45A7P0DMV0 189 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 RHOBP62745 196 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 SLC38A11Q08AI6 406 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 OR52E5Q8NH55 327 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 QTRT1Q9BXR0 403 aaKnown RBP11.17□□□□□ -0.62
RNF43-202ENST00000577625 KCNIP2Q9NS61 270 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 TMEM140Q9NV12 185 aa11.17□□□□□ -0.62
RNF43-202ENST00000577625 LOC102724200A0A096LPH7 203 aaPredicted RBP11.16□□□□□ -0.62
RNF43-202ENST00000577625 NDUFB4O95168 129 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 LGALS4P56470 323 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 RELBQ01201 579 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 POU2AF1Q16633 256 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 PDLIM3Q53GG5 364 aaPredicted RBP11.16□□□□□ -0.62
RNF43-202ENST00000577625 AMMECR1LQ6DCA0 310 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 PET117Q6UWS5 81 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 VKORC1L1Q8N0U8 176 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 ZNF114Q8NC26 417 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 OR4A16Q8NH70 328 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 ZDHHC16Q969W1 377 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 TIMD4Q96H15 378 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 CLUHP3Q96NS8 147 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 CA2P00918 260 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 MT-ND6P03923 174 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 IGHV1-8P0DP01 117 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 IER3P46695 156 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 PRSS57Q6UWY2 283 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 DEFB125Q8N687 156 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 OR8B3Q8NGG8 313 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 RAB1CQ92928 201 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 OR8B2Q96RD0 313 aa11.16□□□□□ -0.62
RNF43-202ENST00000577625 TACC2O95359 2948 aa11.15□□□□□ -0.62
RNF43-202ENST00000577625 LRRK2Q5S007 2527 aa11.15□□□□□ -0.62
RNF43-202ENST00000577625 CDC34P49427 236 aaPredicted RBP11.15□□□□□ -0.62
RNF43-202ENST00000577625 RTL8BQ17RB0 113 aa11.15□□□□□ -0.62
RNF43-202ENST00000577625 ERASQ7Z444 233 aa11.15□□□□□ -0.62
RNF43-202ENST00000577625 OR10P1Q8NGE3 313 aa11.15□□□□□ -0.62
RNF43-202ENST00000577625 DERL1Q9BUN8 251 aa11.15□□□□□ -0.62
RNF43-202ENST00000577625 OR2T8A6NH00 312 aa11.14□□□□□ -0.63
RNF43-202ENST00000577625 NDUFS7O75251 213 aa11.14□□□□□ -0.63
RNF43-202ENST00000577625 PAX2Q02962 417 aa11.14□□□□□ -0.63
RNF43-202ENST00000577625 WDR73Q6P4I2 378 aa11.14□□□□□ -0.63
RNF43-202ENST00000577625 ATOH7Q8N100 152 aa11.14□□□□□ -0.63
RNF43-202ENST00000577625 OR9G1Q8NH87 305 aa11.14□□□□□ -0.63
RNF43-202ENST00000577625 C8orf46Q8TAG6 207 aa11.14□□□□□ -0.63
RNF43-202ENST00000577625 TMEM186Q96B77 213 aa11.14□□□□□ -0.63
RNF43-202ENST00000577625 PGPEP1LA6NFU8 196 aa11.14□□□□□ -0.63
RNF43-202ENST00000577625 PMS2P5A8MQ11 134 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms