RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SIGMAR1Q99720 223 aa10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 FOXC2Q99958 501 aa10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 NHP2Q9NX24 153 aaKnown RBP10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 PILRBQ9UKJ0 227 aa10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 ITGB1BP1O14713 200 aa10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 IGKV1-39P01597 117 aa10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 IGKV1D-39P04432 117 aa10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 IGHV1-2P23083 117 aa10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 FAM216BQ8N7L0 139 aa10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 PYGO2Q9BRQ0 406 aa10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 TCRBV4S1A1TA0A5B7 111 aa10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 H7C2G1 150 aa10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 ETV2O00321 342 aaPredicted RBP10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 TIMM23BQ5SRD1 257 aa10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 FAM90A1Q86YD7 464 aa10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 DENND4AQ7Z401 1863 aa10.86□□□□□ -0.67
PCDHGB3-201ENST00000576222 FOXI3A8MTJ6 420 aaPredicted RBP10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 HAPLN4Q86UW8 402 aa10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 KIR2DL5BA0A0G2JN68 375 aa10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 KIR2DL5BA0A0G2JPC4 375 aa10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 TM4SF5O14894 197 aa10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 CD3EP07766 207 aa10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 GLRXP35754 106 aa10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 RSPO1Q2MKA7 263 aaPredicted RBP10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 KIR2DL5AQ8N109 375 aa10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 ZNF114Q8NC26 417 aa10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 CNOT1A5YKK6 2376 aaKnown RBP10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 CGB1A6NKQ9 187 aa10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 CD5LO43866 347 aa10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 ATP5LO75964 103 aa10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 HBDP02042 147 aa10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 OTORQ9NRC9 128 aa10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 PLXNB3Q9ULL4 1909 aa10.85□□□□□ -0.67
PCDHGB3-201ENST00000576222 SMAGPQ0VAQ4 97 aa10.84□□□□□ -0.67
PCDHGB3-201ENST00000576222 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.84□□□□□ -0.67
PCDHGB3-201ENST00000576222 CST9LQ9H4G1 147 aa10.84□□□□□ -0.67
PCDHGB3-201ENST00000576222 MRPL16Q9NX20 251 aaKnown RBP10.84□□□□□ -0.67
PCDHGB3-201ENST00000576222 OCIAD2Q56VL3 154 aa10.84□□□□□ -0.67
PCDHGB3-201ENST00000576222 STPG4Q8N801 248 aa10.84□□□□□ -0.67
PCDHGB3-201ENST00000576222 ALPK3Q96L96 1907 aa10.84□□□□□ -0.67
PCDHGB3-201ENST00000576222 C18orf32Q8TCD1 76 aa10.84□□□□□ -0.67
PCDHGB3-201ENST00000576222 CYYR1Q96J86 154 aa10.84□□□□□ -0.67
PCDHGB3-201ENST00000576222 RAB1BQ9H0U4 201 aa10.84□□□□□ -0.67
PCDHGB3-201ENST00000576222 FOXA2Q9Y261 457 aaPredicted RBP10.84□□□□□ -0.67
PCDHGB3-201ENST00000576222 IGKV3-7A0A075B6H7 116 aa10.84□□□□□ -0.67
PCDHGB3-201ENST00000576222 IGHV2OR16-5A0A0B4J2B6 119 aa10.84□□□□□ -0.67
PCDHGB3-201ENST00000576222 A0A0G2JLM5 398 aa10.84□□□□□ -0.67
PCDHGB3-201ENST00000576222 PINLYPA6NC86 204 aa10.83□□□□□ -0.68
PCDHGB3-201ENST00000576222 OR9G4Q8NGQ1 327 aa10.83□□□□□ -0.68
PCDHGB3-201ENST00000576222 TRIP6Q15654 476 aaKnown RBP10.83□□□□□ -0.68
PCDHGB3-201ENST00000576222 ECSCRQ19T08 205 aa10.83□□□□□ -0.68
PCDHGB3-201ENST00000576222 TTC32Q5I0X7 151 aa10.83□□□□□ -0.68
PCDHGB3-201ENST00000576222 OR10W1Q8NGF6 305 aa10.83□□□□□ -0.68
PCDHGB3-201ENST00000576222 OR5AN1Q8NGI8 311 aa10.83□□□□□ -0.68
PCDHGB3-201ENST00000576222 INTS1Q8N201 2190 aaKnown RBP10.83□□□□□ -0.68
PCDHGB3-201ENST00000576222 SAMD5Q5TGI4 173 aa10.83□□□□□ -0.68
PCDHGB3-201ENST00000576222 IFI27L1Q96BM0 104 aa10.83□□□□□ -0.68
PCDHGB3-201ENST00000576222 POLEQ07864 2286 aa10.83□□□□□ -0.68
PCDHGB3-201ENST00000576222 M0QZ24 198 aa10.83□□□□□ -0.68
PCDHGB3-201ENST00000576222 IGLV3-1P01715 115 aa10.83□□□□□ -0.68
PCDHGB3-201ENST00000576222 KLK10O43240 276 aa10.82□□□□□ -0.68
PCDHGB3-201ENST00000576222 GUSBP1Q15486 140 aa10.82□□□□□ -0.68
PCDHGB3-201ENST00000576222 RABAC1Q9UI14 185 aa10.82□□□□□ -0.68
PCDHGB3-201ENST00000576222 FER1L6-AS1Q8NA97 138 aa10.82□□□□□ -0.68
PCDHGB3-201ENST00000576222 ZNF418Q8TF45 676 aaPredicted RBP10.82□□□□□ -0.68
PCDHGB3-201ENST00000576222 CCDC144NLQ6NUI1 221 aa10.82□□□□□ -0.68
PCDHGB3-201ENST00000576222 MBNL3Q9NUK0 354 aaKnown RBP10.82□□□□□ -0.68
PCDHGB3-201ENST00000576222 MCRIP2Q9BUT9 160 aaKnown RBP10.82□□□□□ -0.68
PCDHGB3-201ENST00000576222 DENND4CQ5VZ89 1909 aa10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 MMP23AO75900 390 aa10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 RPL15P61313 204 aaKnown RBP10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 C1orf162Q8NEQ5 155 aaPredicted RBP10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 PRR7Q8TB68 274 aa10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 HEATR1Q9H583 2144 aaKnown RBP10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 COLCA1Q6ZS62 124 aa10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 SLC25A48Q6ZT89 311 aaKnown RBP10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 COQ2Q96H96 371 aa10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 LINC00479Q96M42 142 aa10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 SCRT1Q9BWW7 348 aa10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 COX6CP09669 75 aa10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 LTBRP36941 435 aa10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 LEPP41159 167 aa10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 ATP1A1-AS1Q5TC04 95 aa10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 FBXL15Q9H469 300 aa10.81□□□□□ -0.68
PCDHGB3-201ENST00000576222 PDLIM4P50479 330 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 ZNF138P52744 262 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 DGAT2L7PQ6IED9 249 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 DEFB124Q8NES8 71 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 METRNQ9UJH8 293 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 PSG8Q9UQ74 426 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 LINC00312Q9Y6C7 94 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 ZNF407Q9C0G0 2248 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 NKX2-8O15522 239 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 C1orf185Q5T7R7 199 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 ZNF256Q9Y2P7 627 aaPredicted RBP10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 TRIOBPQ9H2D6 2365 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 CHD3Q12873 2000 aaKnown RBP10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 IGHV3-35A0A0C4DH35 117 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 IGLL1P15814 213 aa10.8□□□□□ -0.68
PCDHGB3-201ENST00000576222 PHLDA3Q9Y5J5 127 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms