RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 METTL26Q96S19 204 aa13.73□□□□□ -0.21
LINC01238-205ENST00000567549 C11orf68Q9H3H3 251 aaKnown RBP13.73□□□□□ -0.21
LINC01238-205ENST00000567549 GPN1Q9HCN4 374 aaPredicted RBP13.73□□□□□ -0.21
LINC01238-205ENST00000567549 ALG5Q9Y673 324 aa13.73□□□□□ -0.21
LINC01238-205ENST00000567549 DNAH1Q9P2D7 4330 aa13.73□□□□□ -0.21
LINC01238-205ENST00000567549 TCTAP57738 103 aa13.72□□□□□ -0.21
LINC01238-205ENST00000567549 SCGB2B2Q4G0G5 96 aa13.72□□□□□ -0.21
LINC01238-205ENST00000567549 FAM90A2PQ658T7 463 aa13.72□□□□□ -0.21
LINC01238-205ENST00000567549 TOMM20LQ6UXN7 152 aa13.72□□□□□ -0.21
LINC01238-205ENST00000567549 PHLDA1Q8WV24 401 aaPredicted RBP13.72□□□□□ -0.21
LINC01238-205ENST00000567549 VSIRQ9H7M9 311 aa13.72□□□□□ -0.21
LINC01238-205ENST00000567549 PUS1Q9Y606 427 aaKnown RBP eCLIP13.72□□□□□ -0.21
LINC01238-205ENST00000567549 IGHV3-49A0A0A0MS15 119 aa13.71□□□□□ -0.21
LINC01238-205ENST00000567549 OPRK1P41145 380 aa13.71□□□□□ -0.21
LINC01238-205ENST00000567549 TMEM187Q14656 261 aa13.71□□□□□ -0.21
LINC01238-205ENST00000567549 AKAP14Q86UN6 197 aa13.71□□□□□ -0.21
LINC01238-205ENST00000567549 LHFPL1Q86WI0 220 aa13.71□□□□□ -0.21
LINC01238-205ENST00000567549 STHQ8IWL8 128 aa13.71□□□□□ -0.21
LINC01238-205ENST00000567549 GBGT1Q8N5D6 347 aa13.71□□□□□ -0.21
LINC01238-205ENST00000567549 C11orf45Q8TAV5 145 aa13.71□□□□□ -0.21
LINC01238-205ENST00000567549 FLVCR2Q9UPI3 526 aa13.71□□□□□ -0.21
LINC01238-205ENST00000567549 C14orf166Q9Y224 244 aaKnown RBP13.71□□□□□ -0.21
LINC01238-205ENST00000567549 BIRC6Q9NR09 4857 aa13.7□□□□□ -0.22
LINC01238-205ENST00000567549 A0A0B4J293 547 aa13.7□□□□□ -0.22
LINC01238-205ENST00000567549 SNRPGP15A8MWD9 76 aa13.7□□□□□ -0.22
LINC01238-205ENST00000567549 TMEM50AO95807 157 aa13.7□□□□□ -0.22
LINC01238-205ENST00000567549 CA1P00915 261 aaPredicted RBP13.7□□□□□ -0.22
LINC01238-205ENST00000567549 NOXA1Q86UR1 476 aa13.7□□□□□ -0.22
LINC01238-205ENST00000567549 OR13C8Q8NGS7 320 aa13.7□□□□□ -0.22
LINC01238-205ENST00000567549 OR11H2Q8NH07 326 aa13.7□□□□□ -0.22
LINC01238-205ENST00000567549 TMEM230Q96A57 120 aa13.7□□□□□ -0.22
LINC01238-205ENST00000567549 TP53RKQ96S44 253 aa13.7□□□□□ -0.22
LINC01238-205ENST00000567549 MS4A6AQ9H2W1 248 aa13.7□□□□□ -0.22
LINC01238-205ENST00000567549 RABAC1Q9UI14 185 aa13.7□□□□□ -0.22
LINC01238-205ENST00000567549 IGHV3OR16-13A0A075B7E8 117 aa13.69□□□□□ -0.22
LINC01238-205ENST00000567549 IGHV3-74A0A0B4J1X5 117 aa13.69□□□□□ -0.22
LINC01238-205ENST00000567549 CLN5O75503 358 aa13.69□□□□□ -0.22
LINC01238-205ENST00000567549 IGHV3-48P01763 117 aa13.69□□□□□ -0.22
LINC01238-205ENST00000567549 UCP1P25874 307 aa13.69□□□□□ -0.22
LINC01238-205ENST00000567549 HTR2BP41595 481 aa13.69□□□□□ -0.22
LINC01238-205ENST00000567549 SPCS3P61009 180 aa13.69□□□□□ -0.22
LINC01238-205ENST00000567549 RRAS2P62070 204 aaPredicted RBP13.69□□□□□ -0.22
LINC01238-205ENST00000567549 SURF2Q15527 256 aaPredicted RBP13.69□□□□□ -0.22
LINC01238-205ENST00000567549 MORN3Q6PF18 240 aaPredicted RBP13.69□□□□□ -0.22
LINC01238-205ENST00000567549 OR4X1Q8NH49 305 aa13.69□□□□□ -0.22
LINC01238-205ENST00000567549 ST8SIA2Q92186 375 aa13.69□□□□□ -0.22
LINC01238-205ENST00000567549 MED28Q9H204 178 aa13.69□□□□□ -0.22
LINC01238-205ENST00000567549 CCNKO75909 580 aa13.68□□□□□ -0.22
LINC01238-205ENST00000567549 IGKV1-5P01602 117 aa13.68□□□□□ -0.22
LINC01238-205ENST00000567549 HNRNPCP07910 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
LINC01238-205ENST00000567549 SLC25A4P12235 298 aa13.68□□□□□ -0.22
LINC01238-205ENST00000567549 PI3P19957 117 aa13.68□□□□□ -0.22
LINC01238-205ENST00000567549 AP2S1P53680 142 aaPredicted RBP13.68□□□□□ -0.22
LINC01238-205ENST00000567549 DHODHQ02127 395 aa13.68□□□□□ -0.22
LINC01238-205ENST00000567549 SPINK9Q5DT21 86 aa13.68□□□□□ -0.22
LINC01238-205ENST00000567549 LGALS9CQ6DKI2 356 aa13.68□□□□□ -0.22
LINC01238-205ENST00000567549 ETFRF1Q6IPR1 90 aa13.68□□□□□ -0.22
LINC01238-205ENST00000567549 OR52E5Q8NH55 327 aa13.68□□□□□ -0.22
LINC01238-205ENST00000567549 ZNF414Q96IQ9 312 aa13.68□□□□□ -0.22
LINC01238-205ENST00000567549 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.68□□□□□ -0.22
LINC01238-205ENST00000567549 EPPK1P58107 5090 aaKnown RBP13.67□□□□□ -0.22
LINC01238-205ENST00000567549 PIGBOS1A0A0B4J2F0 54 aa13.67□□□□□ -0.22
LINC01238-205ENST00000567549 TEX13DA0A0J9YY54 714 aaPredicted RBP13.67□□□□□ -0.22
LINC01238-205ENST00000567549 HELTA6NFD8 242 aa13.67□□□□□ -0.22
LINC01238-205ENST00000567549 P0C879 139 aa13.67□□□□□ -0.22
LINC01238-205ENST00000567549 RNASE2P10153 161 aaKnown RBP13.67□□□□□ -0.22
LINC01238-205ENST00000567549 SPP1P10451 314 aa13.67□□□□□ -0.22
LINC01238-205ENST00000567549 ANXA7P20073 488 aaKnown RBP13.67□□□□□ -0.22
LINC01238-205ENST00000567549 DEFB131AP59861 70 aa13.67□□□□□ -0.22
LINC01238-205ENST00000567549 UBE2MP61081 183 aaKnown RBP13.67□□□□□ -0.22
LINC01238-205ENST00000567549 PVRIGQ6DKI7 326 aa13.67□□□□□ -0.22
LINC01238-205ENST00000567549 ZFAND3Q9H8U3 227 aa13.67□□□□□ -0.22
LINC01238-205ENST00000567549 C11orf94C9JXX5 98 aa13.66□□□□□ -0.22
LINC01238-205ENST00000567549 EWSR1Q01844 656 aaKnown RBP eCLIP13.66□□□□□ -0.22
LINC01238-205ENST00000567549 STXBP6Q8NFX7 210 aa13.66□□□□□ -0.22
LINC01238-205ENST00000567549 Q8WTZ3 238 aa13.66□□□□□ -0.22
LINC01238-205ENST00000567549 RBPMSQ93062 196 aaKnown RBP13.66□□□□□ -0.22
LINC01238-205ENST00000567549 TMEM222Q9H0R3 208 aa13.66□□□□□ -0.22
LINC01238-205ENST00000567549 HEYLQ9NQ87 328 aaPredicted RBP13.66□□□□□ -0.22
LINC01238-205ENST00000567549 PFDN2Q9UHV9 154 aa13.66□□□□□ -0.22
LINC01238-205ENST00000567549 GPR132Q9UNW8 380 aa13.66□□□□□ -0.22
LINC01238-205ENST00000567549 HYDINQ4G0P3 5121 aa13.65□□□□□ -0.22
LINC01238-205ENST00000567549 SSNA1O43805 119 aa13.65□□□□□ -0.22
LINC01238-205ENST00000567549 CRYBB3P26998 211 aa13.65□□□□□ -0.22
LINC01238-205ENST00000567549 IZUMO4Q1ZYL8 232 aa13.65□□□□□ -0.22
LINC01238-205ENST00000567549 C4orf46Q504U0 113 aa13.65□□□□□ -0.22
LINC01238-205ENST00000567549 TMED4Q7Z7H5 227 aa13.65□□□□□ -0.22
LINC01238-205ENST00000567549 OR1S2Q8NGQ3 325 aa13.65□□□□□ -0.22
LINC01238-205ENST00000567549 MARCH1Q8TCQ1 289 aa13.65□□□□□ -0.22
LINC01238-205ENST00000567549 RNASEH2CQ8TDP1 164 aaKnown RBP13.65□□□□□ -0.22
LINC01238-205ENST00000567549 C2CD4CQ8TF44 421 aa13.65□□□□□ -0.22
LINC01238-205ENST00000567549 FBXL17Q9UF56 701 aa13.65□□□□□ -0.22
LINC01238-205ENST00000567549 ALMS1Q8TCU4 4167 aa13.64□□□□□ -0.23
LINC01238-205ENST00000567549 CDS2O95674 445 aa13.64□□□□□ -0.23
LINC01238-205ENST00000567549 OR4E1P0C645 316 aa13.64□□□□□ -0.23
LINC01238-205ENST00000567549 NUP62P37198 522 aaPredicted RBP13.64□□□□□ -0.23
LINC01238-205ENST00000567549 P2RY1P47900 373 aa13.64□□□□□ -0.23
LINC01238-205ENST00000567549 NUTF2P61970 127 aaKnown RBP13.64□□□□□ -0.23
LINC01238-205ENST00000567549 ZNF124Q15973 351 aa13.64□□□□□ -0.23
LINC01238-205ENST00000567549 SP6Q3SY56 376 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms