RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 OR1L4Q8NGR5 311 aa12.71□□□□□ -0.38
COMMD4-215ENST00000566843 INS-IGF2F8WCM5 200 aa12.7□□□□□ -0.38
COMMD4-215ENST00000566843 FTH1P19P0C7X4 201 aa12.7□□□□□ -0.38
COMMD4-215ENST00000566843 CA7P43166 264 aa12.7□□□□□ -0.38
COMMD4-215ENST00000566843 CAMPP49913 170 aa12.7□□□□□ -0.38
COMMD4-215ENST00000566843 SSX8Q7RTT4 187 aa12.7□□□□□ -0.38
COMMD4-215ENST00000566843 DEFB125Q8N687 156 aa12.7□□□□□ -0.38
COMMD4-215ENST00000566843 FXYD5Q96DB9 178 aa12.7□□□□□ -0.38
COMMD4-215ENST00000566843 DSCAML1Q8TD84 2053 aa12.7□□□□□ -0.38
COMMD4-215ENST00000566843 FREM2Q5SZK8 3169 aa12.7□□□□□ -0.38
COMMD4-215ENST00000566843 IGHV1-18A0A0C4DH31 117 aa12.69□□□□□ -0.38
COMMD4-215ENST00000566843 HSBP1L1C9JCN9 74 aa12.69□□□□□ -0.38
COMMD4-215ENST00000566843 HBBP68871 147 aa12.69□□□□□ -0.38
COMMD4-215ENST00000566843 PATE2Q6UY27 113 aa12.69□□□□□ -0.38
COMMD4-215ENST00000566843 OR2T6Q8NHC8 308 aa12.69□□□□□ -0.38
COMMD4-215ENST00000566843 LINC00574Q9H8X3 128 aa12.69□□□□□ -0.38
COMMD4-215ENST00000566843 KLF12Q9Y4X4 402 aa12.69□□□□□ -0.38
COMMD4-215ENST00000566843 SOX21Q9Y651 276 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-215ENST00000566843 ZNF292O60281 2723 aa12.69□□□□□ -0.38
COMMD4-215ENST00000566843 CELSR3Q9NYQ7 3312 aa12.69□□□□□ -0.38
COMMD4-215ENST00000566843 IGHV1-24A0A0C4DH33 117 aa12.69□□□□□ -0.38
COMMD4-215ENST00000566843 COX7A2P2O60397 106 aa12.69□□□□□ -0.38
COMMD4-215ENST00000566843 CT83Q5H943 113 aa12.69□□□□□ -0.38
COMMD4-215ENST00000566843 C10orf113Q5VZT2 155 aa12.69□□□□□ -0.38
COMMD4-215ENST00000566843 NDUFA4L2Q9NRX3 87 aa12.69□□□□□ -0.38
COMMD4-215ENST00000566843 SH2D7A6NKC9 451 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-215ENST00000566843 IGKV1-16P04430 117 aa12.68□□□□□ -0.38
COMMD4-215ENST00000566843 SAA1P0DJI8 122 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-215ENST00000566843 KIR2DL2P43627 348 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-215ENST00000566843 MSMPQ1L6U9 139 aa12.68□□□□□ -0.38
COMMD4-215ENST00000566843 SPRNQ5BIV9 151 aa12.68□□□□□ -0.38
COMMD4-215ENST00000566843 PRR27Q6MZM9 219 aa12.68□□□□□ -0.38
COMMD4-215ENST00000566843 SLC25A34Q6PIV7 304 aa12.68□□□□□ -0.38
COMMD4-215ENST00000566843 OR10W1Q8NGF6 305 aa12.68□□□□□ -0.38
COMMD4-215ENST00000566843 FAM222BQ8WU58 562 aa12.68□□□□□ -0.38
COMMD4-215ENST00000566843 ST6GALNAC6Q969X2 333 aa12.68□□□□□ -0.38
COMMD4-215ENST00000566843 PRSS22Q9GZN4 317 aa12.68□□□□□ -0.38
COMMD4-215ENST00000566843 HLA-DRB1P01911 266 aa12.68□□□□□ -0.38
COMMD4-215ENST00000566843 SSBP2P81877 361 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-215ENST00000566843 TMEM30BQ3MIR4 351 aa12.68□□□□□ -0.38
COMMD4-215ENST00000566843 SLC25A48Q6ZT89 311 aaKnown RBP12.68□□□□□ -0.38
COMMD4-215ENST00000566843 FER1L6-AS2Q96M78 137 aa12.68□□□□□ -0.38
COMMD4-215ENST00000566843 MLST8Q9BVC4 326 aa12.68□□□□□ -0.38
COMMD4-215ENST00000566843 EPDR1Q9UM22 224 aa12.68□□□□□ -0.38
COMMD4-215ENST00000566843 NUDT3O95989 172 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 C12orf54Q6X4T0 127 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 LINC00173Q6ZV60 143 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 MOGAT3Q86VF5 341 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 RPP21Q9H633 154 aaKnown RBP12.67□□□□□ -0.38
COMMD4-215ENST00000566843 ZNF430Q9H8G1 570 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-215ENST00000566843 SCRT2Q9NQ03 307 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 ZNF492Q9P255 531 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 TP73-AS1Q9UF72 201 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 WASHC3Q9Y3C0 194 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 TNCP24821 2201 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 GVINP1Q7Z2Y8 2422 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 TANC2Q9HCD6 1990 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 CNOT1A5YKK6 2376 aaKnown RBP12.67□□□□□ -0.38
COMMD4-215ENST00000566843 TCRBV4S1A1TA0A5B7 111 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 hDV102S1A0JD36 115 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 OR5AL1P0C617 328 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 TCF24Q7RTU0 167 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 SMIM15Q7Z3B0 74 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 CNEP1R1Q8N9A8 125 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 THAP8Q8NA92 274 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 TMEM191AQ9H0A3 160 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 CST9LQ9H4G1 147 aa12.67□□□□□ -0.38
COMMD4-215ENST00000566843 IGKV1D-37A0A075B6S9 117 aa12.66□□□□□ -0.38
COMMD4-215ENST00000566843 LEPROTL1O95214 131 aa12.66□□□□□ -0.38
COMMD4-215ENST00000566843 IGHG3P01860 377 aa12.66□□□□□ -0.38
COMMD4-215ENST00000566843 GNG5P63218 68 aa12.66□□□□□ -0.38
COMMD4-215ENST00000566843 ERHP84090 104 aaKnown RBP12.66□□□□□ -0.38
COMMD4-215ENST00000566843 RNF151Q2KHN1 245 aa12.66□□□□□ -0.38
COMMD4-215ENST00000566843 PET117Q6UWS5 81 aa12.66□□□□□ -0.38
COMMD4-215ENST00000566843 FAM169BQ8N8A8 192 aa12.66□□□□□ -0.38
COMMD4-215ENST00000566843 TMEM178AQ8NBL3 297 aa12.66□□□□□ -0.38
COMMD4-215ENST00000566843 GPR82Q96P67 336 aa12.66□□□□□ -0.38
COMMD4-215ENST00000566843 ZNF835Q9Y2P0 537 aa12.66□□□□□ -0.38
COMMD4-215ENST00000566843 ASPMQ8IZT6 3477 aa12.66□□□□□ -0.38
COMMD4-215ENST00000566843 PTPRZ1P23471 2315 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-215ENST00000566843 C19orf71A6NCJ1 209 aa12.65□□□□□ -0.38
COMMD4-215ENST00000566843 A8MWL6 223 aa12.65□□□□□ -0.38
COMMD4-215ENST00000566843 OSR1Q8TAX0 266 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-215ENST00000566843 MS4A6AQ9H2W1 248 aa12.65□□□□□ -0.38
COMMD4-215ENST00000566843 DKK4Q9UBT3 224 aa12.65□□□□□ -0.38
COMMD4-215ENST00000566843 M0QZ24 198 aa12.65□□□□□ -0.38
COMMD4-215ENST00000566843 CD5LO43866 347 aa12.65□□□□□ -0.38
COMMD4-215ENST00000566843 OCIAD2Q56VL3 154 aa12.65□□□□□ -0.38
COMMD4-215ENST00000566843 TMEM164Q5U3C3 297 aa12.65□□□□□ -0.38
COMMD4-215ENST00000566843 GTSF1Q8WW33 167 aa12.65□□□□□ -0.38
COMMD4-215ENST00000566843 NDFIP1Q9BT67 221 aa12.65□□□□□ -0.38
COMMD4-215ENST00000566843 GFRA4Q9GZZ7 299 aa12.65□□□□□ -0.38
COMMD4-215ENST00000566843 FNDC4Q9H6D8 234 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-215ENST00000566843 RPUSD1Q9UJJ7 312 aaKnown RBP12.65□□□□□ -0.38
COMMD4-215ENST00000566843 AHCTF1Q8WYP5 2266 aa12.65□□□□□ -0.39
COMMD4-215ENST00000566843 MUC21A0A0G2JKD1 596 aa12.64□□□□□ -0.39
COMMD4-215ENST00000566843 MUC21A0A140T8X8 626 aa12.64□□□□□ -0.39
COMMD4-215ENST00000566843 MUC21Q5SSG8 566 aa12.64□□□□□ -0.39
COMMD4-215ENST00000566843 LINC00322Q6ZN03 302 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-215ENST00000566843 ZNF833PQ6ZTB9 187 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms