RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 MRPL32Q9BYC8 188 aaKnown RBP3.68□□□□□ -1.82
SMG1-207ENST00000563235 MRPL20Q9BYC9 149 aaKnown RBP3.68□□□□□ -1.82
SMG1-207ENST00000563235 SRXN1Q9BYN0 137 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 PARP14Q460N5 1801 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 MYLKQ15746 1914 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 TRBV20-1A0A075B6N2 111 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 IGHV4-28A0A0C4DH34 117 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 A8MUN3 132 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 ZNF727A8MUV8 499 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 LGALS9O00182 355 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 TNFSF12O43508 249 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 HIST1H1DP16402 221 aaKnown RBP3.67□□□□□ -1.82
SMG1-207ENST00000563235 ZNF93P35789 620 aaPredicted RBP3.67□□□□□ -1.82
SMG1-207ENST00000563235 OPRK1P41145 380 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 HMGA2P52926 109 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 HES3Q5TGS1 186 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 TRAPPC6BQ86SZ2 158 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 MKXQ8IYA7 352 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 TP73-AS1Q9UF72 201 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 COL4A3Q01955 1670 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 TRAV14DV4A0A0A6YYC5 116 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 IGHV1-69-2A0A0G2JMI3 117 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 LOC389332A0A1B0GUA5 103 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 IRGMA1A4Y4 181 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 CREBL2O60519 120 aaPredicted RBP3.67□□□□□ -1.82
SMG1-207ENST00000563235 APOMO95445 188 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 PPIBP23284 216 aaKnown RBP3.67□□□□□ -1.82
SMG1-207ENST00000563235 LINC00313P59037 77 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 NCBP2-AS2Q69YL0 99 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 PCSK4Q6UW60 755 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 MARCH3Q86UD3 253 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 C3orf56Q8N813 242 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 SMIM4Q8WVI0 70 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 ELSPBP1Q96BH3 223 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 LINC00312Q9Y6C7 94 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 SCN2AQ99250 2005 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 LOC285556D6RIA3 1793 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 COL4A4P53420 1690 aaPredicted RBP3.67□□□□□ -1.82
SMG1-207ENST00000563235 TRAV27A0A087WT01 109 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 IGKV1D-43A0A0B4J1Z2 117 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 OR2T8A6NH00 312 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 OOSP1A8MZH6 123 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 AGPAT2O15120 278 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 HRASP01112 189 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 KRASP01116 189 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 PSMB3P49720 205 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 MLF2Q15773 248 aaPredicted RBP3.67□□□□□ -1.82
SMG1-207ENST00000563235 COA6Q5JTJ3 125 aaKnown RBP3.67□□□□□ -1.82
SMG1-207ENST00000563235 EIF5AL1Q6IS14 154 aaKnown RBP3.67□□□□□ -1.82
SMG1-207ENST00000563235 TOMM5Q8N4H5 51 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 RAB42Q8N4Z0 105 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 OR2T10Q8NGZ9 312 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 ZNF721Q8TF20 911 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 POLR2J2Q9GZM3 115 aaKnown RBP3.67□□□□□ -1.82
SMG1-207ENST00000563235 RPRMQ9NS64 109 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 C21orf62Q9NYP8 219 aa3.67□□□□□ -1.82
SMG1-207ENST00000563235 IGKV1-27A0A075B6S5 117 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 TRAV41A0A0B4J266 112 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 IGHV3OR16-9A0A0B4J2B5 98 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 IZUMO1RA6ND01 250 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 DEDDO75618 318 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 TCRAP04437 139 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 LINC00271P0C7V0 271 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 SMIM10L2AP0DMW4 78 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 SMIM10L2BP0DMW5 78 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 NCBP2P52298 156 aaKnown RBP eCLIP3.66□□□□□ -1.82
SMG1-207ENST00000563235 MP68P56378 58 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 ATP5G2Q06055 141 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 WDR38Q5JTN6 314 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 MRPL54Q6P161 138 aaKnown RBP3.66□□□□□ -1.82
SMG1-207ENST00000563235 KTN1-AS1Q86SY8 53 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 LRP11Q86VZ4 500 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 NTN5Q8WTR8 489 aaPredicted RBP3.66□□□□□ -1.82
SMG1-207ENST00000563235 RTN4IP1Q8WWV3 396 aaPredicted RBP3.66□□□□□ -1.82
SMG1-207ENST00000563235 TMEM204Q9BSN7 226 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 BANF2Q9H503 90 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 C16orf95Q9H693 158 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 CACNG5Q9UF02 275 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 LINC00527Q9UJ94 153 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 NUP205Q92621 2012 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 RALGAPA2Q2PPJ7 1873 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 ZDBF2Q9HCK1 2354 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 DOCK4Q8N1I0 1966 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 LST1O00453 97 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 NDUFB6O95139 128 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 NAPSAO96009 420 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 TNFP01375 233 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 RPS13P62277 151 aaKnown RBP3.66□□□□□ -1.82
SMG1-207ENST00000563235 KLRD1Q13241 179 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 REG3GQ6UW15 175 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 SHISA6Q6ZSJ9 500 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 PCP2Q8IVA1 136 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 C1orf174Q8IYL3 243 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 RPP25LQ8N5L8 163 aaKnown RBP3.66□□□□□ -1.82
SMG1-207ENST00000563235 ZFP62Q8NB50 900 aaPredicted RBP3.66□□□□□ -1.82
SMG1-207ENST00000563235 ATXN7L3BQ96GX2 97 aa3.66□□□□□ -1.82
SMG1-207ENST00000563235 SNRNP25Q9BV90 132 aaKnown RBP3.66□□□□□ -1.82
SMG1-207ENST00000563235 ZNF706Q9Y5V0 76 aaPredicted RBP3.66□□□□□ -1.82
SMG1-207ENST00000563235 MYO18AQ92614 2054 aaKnown RBP3.65□□□□□ -1.82
SMG1-207ENST00000563235 PGPA6NDG6 321 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms