RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 NANOS3P60323 173 aaKnown RBP7.61□□□□□ -1.19
CDH1-205ENST00000562836 HERV-K104P61576 105 aa7.61□□□□□ -1.19
CDH1-205ENST00000562836 ANKRD29Q8N6D5 301 aa7.61□□□□□ -1.19
CDH1-205ENST00000562836 KXD1Q9BQD3 176 aa7.61□□□□□ -1.19
CDH1-205ENST00000562836 APOOQ9BUR5 198 aa7.61□□□□□ -1.19
CDH1-205ENST00000562836 TRAV9-1A0A075B6T8 112 aa7.61□□□□□ -1.19
CDH1-205ENST00000562836 TRAV13-1A0A0B4J241 112 aa7.61□□□□□ -1.19
CDH1-205ENST00000562836 C5orf63A6NC05 138 aa7.61□□□□□ -1.19
CDH1-205ENST00000562836 PTGESO14684 152 aa7.61□□□□□ -1.19
CDH1-205ENST00000562836 NPPCP23582 126 aa7.61□□□□□ -1.19
CDH1-205ENST00000562836 FAM120AOSQ5T036 256 aa7.61□□□□□ -1.19
CDH1-205ENST00000562836 CXorf67Q86X51 503 aaPredicted RBP7.61□□□□□ -1.19
CDH1-205ENST00000562836 ZNF689Q96CS4 500 aaPredicted RBP7.61□□□□□ -1.19
CDH1-205ENST00000562836 GOLGA2P5Q9HBQ8 144 aa7.61□□□□□ -1.19
CDH1-205ENST00000562836 FAM60AQ9NP50 221 aa7.61□□□□□ -1.19
CDH1-205ENST00000562836 hADV29S1A0JD25 119 aa7.6□□□□□ -1.19
CDH1-205ENST00000562836 LEPROTL1O95214 131 aa7.6□□□□□ -1.19
CDH1-205ENST00000562836 PRNPP04156 253 aa7.6□□□□□ -1.19
CDH1-205ENST00000562836 VEGFBP49765 207 aa7.6□□□□□ -1.19
CDH1-205ENST00000562836 ZNF117Q03924 483 aa7.6□□□□□ -1.19
CDH1-205ENST00000562836 OR11H6Q8NGC7 330 aa7.6□□□□□ -1.19
CDH1-205ENST00000562836 MPV17P39210 176 aa7.6□□□□□ -1.19
CDH1-205ENST00000562836 PRDX1Q06830 199 aaKnown RBP7.6□□□□□ -1.19
CDH1-205ENST00000562836 ARTNQ5T4W7 220 aa7.6□□□□□ -1.19
CDH1-205ENST00000562836 H1FXQ92522 213 aaKnown RBP7.6□□□□□ -1.19
CDH1-205ENST00000562836 SCN2AQ99250 2005 aa7.6□□□□□ -1.19
CDH1-205ENST00000562836 DPM2O94777 84 aa7.59□□□□□ -1.19
CDH1-205ENST00000562836 MS4A13Q5J8X5 152 aa7.59□□□□□ -1.19
CDH1-205ENST00000562836 FAM57AQ8TBR7 257 aa7.59□□□□□ -1.19
CDH1-205ENST00000562836 PLEKHB2Q96CS7 222 aa7.59□□□□□ -1.19
CDH1-205ENST00000562836 Q96M85 177 aa7.59□□□□□ -1.19
CDH1-205ENST00000562836 SCGB3A2Q96PL1 93 aa7.59□□□□□ -1.19
CDH1-205ENST00000562836 HIGD1BQ9P298 99 aa7.59□□□□□ -1.19
CDH1-205ENST00000562836 MYBPHLA2RUH7 354 aa7.59□□□□□ -1.19
CDH1-205ENST00000562836 PLA2G5P39877 138 aa7.59□□□□□ -1.19
CDH1-205ENST00000562836 LYSMD4Q5XG99 296 aa7.59□□□□□ -1.19
CDH1-205ENST00000562836 TBC1D26Q86UD7 250 aa7.59□□□□□ -1.19
CDH1-205ENST00000562836 OR9G1Q8NH87 305 aa7.59□□□□□ -1.19
CDH1-205ENST00000562836 ZNF286AQ9HBT8 521 aa7.59□□□□□ -1.19
CDH1-205ENST00000562836 RTL8BQ17RB0 113 aa7.59□□□□□ -1.2
CDH1-205ENST00000562836 IZUMO4Q1ZYL8 232 aa7.59□□□□□ -1.2
CDH1-205ENST00000562836 CEMP1Q6PRD7 247 aaPredicted RBP7.59□□□□□ -1.2
CDH1-205ENST00000562836 MMD2Q8IY49 270 aa7.59□□□□□ -1.2
CDH1-205ENST00000562836 BORCS8Q96FH0 119 aa7.59□□□□□ -1.2
CDH1-205ENST00000562836 ODF3Q96PU9 254 aa7.59□□□□□ -1.2
CDH1-205ENST00000562836 CYSTM1Q9H1C7 97 aa7.59□□□□□ -1.2
CDH1-205ENST00000562836 PCDH15Q96QU1 1955 aa7.58□□□□□ -1.2
CDH1-205ENST00000562836 PLXNA4Q9HCM2 1894 aa7.58□□□□□ -1.2
CDH1-205ENST00000562836 TRGV11A0A075B6L2 103 aa7.58□□□□□ -1.2
CDH1-205ENST00000562836 LINC00596Q86U02 117 aa7.58□□□□□ -1.2
CDH1-205ENST00000562836 NPIPB11E5RHQ5 1161 aa7.58□□□□□ -1.2
CDH1-205ENST00000562836 H3BVH4 76 aa7.58□□□□□ -1.2
CDH1-205ENST00000562836 K7EM74 188 aa7.58□□□□□ -1.2
CDH1-205ENST00000562836 C1orf105O95561 183 aa7.58□□□□□ -1.2
CDH1-205ENST00000562836 TMEM258P61165 79 aa7.58□□□□□ -1.2
CDH1-205ENST00000562836 NUP35Q8NFH5 326 aa7.58□□□□□ -1.2
CDH1-205ENST00000562836 OR10AC1Q8NH08 325 aa7.58□□□□□ -1.2
CDH1-205ENST00000562836 RPUSD1Q9UJJ7 312 aaKnown RBP7.58□□□□□ -1.2
CDH1-205ENST00000562836 TIMM8BQ9Y5J9 83 aaPredicted RBP7.58□□□□□ -1.2
CDH1-205ENST00000562836 TDRD6O60522 2096 aaKnown RBP7.57□□□□□ -1.2
CDH1-205ENST00000562836 PLXNB3Q9ULL4 1909 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 CENPFP49454 3210 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 TRAV27A0A087WT01 109 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 TRAV2A0A0B4J234 112 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 PSMB2P49721 201 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 TMEM252Q8N6L7 170 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 OTORQ9NRC9 128 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 AP5S1Q9NUS5 200 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 MYO7AQ13402 2215 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 NDUFB4O95168 129 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 CRYGAP11844 174 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 ERVK-16P61578 105 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 RRN3P1Q2M238 152 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 AAED1Q7RTV5 226 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 LYZL2Q7Z4W2 148 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 TMEM74BQ9NUR3 256 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 Q9UF83 564 aa7.57□□□□□ -1.2
CDH1-205ENST00000562836 TEX50A0A1B0GTY4 177 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 NGFP01138 241 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 HLA-DOBP13765 273 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 C16orf92Q96LL3 132 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 C3orf85A0A1B0GTC6 90 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 A0A1B0GTH9 108 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 PRSS38A1L453 326 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 C15orf61A6NNL5 157 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 TCL1BO95988 128 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 HLA-DQA1P01909 254 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 ZGLP1P0C6A0 271 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 LOXL3P58215 753 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 PRIMA1Q86XR5 153 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 C17orf77Q96MU5 243 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 PLEKHA3Q9HB20 300 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 TAAR2Q9P1P5 351 aa7.56□□□□□ -1.2
CDH1-205ENST00000562836 ARHGAP21Q5T5U3 1957 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 IGHV1-24A0A0C4DH33 117 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 MYCNOSP40205 109 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 GNB1P62873 340 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 C12orf74Q32Q52 190 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 LHFPL1Q86WI0 220 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 SPACA3Q8IXA5 215 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms