RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 NXPH1P58417 271 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 TREML4Q6UXN2 200 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 FRMPD1Q5SYB0 1578 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 LTBP3Q9NS15 1303 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF462Q96JM2 2506 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 SPANXCQ9NY87 97 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 SIGLEC8Q9NYZ4 499 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF581Q9P0T4 197 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 IQGAP1P46940 1657 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 MYO7BQ6PIF6 2116 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 CFHR2P36980 270 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 DUX4L9Q6RFH8 374 aaPredicted RBP3.06□□□□□ -1.92
ATXN3-248ENST00000558190 MYH2Q9UKX2 1941 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 MYMXA0A1B0GTQ4 84 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 TOMM40O96008 361 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 C10orf128Q5T292 105 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 CALYQ9NYX4 217 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 EXOC3-AS1Q8N2X6 119 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 PRRG2O14669 202 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 CEACAM4O75871 244 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF658BQ4V348 819 aaPredicted RBP3.05□□□□□ -1.92
ATXN3-248ENST00000558190 CYYR1Q96J86 154 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 CLTCQ00610 1675 aaKnown RBP3.05□□□□□ -1.92
ATXN3-248ENST00000558190 RBM3P98179 157 aaKnown RBP3.05□□□□□ -1.92
ATXN3-248ENST00000558190 FAM104BQ5XKR9 115 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 TEX45Q8NA69 505 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 FGFBP3Q8TAT2 258 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 FOXA2Q9Y261 457 aaPredicted RBP3.05□□□□□ -1.92
ATXN3-248ENST00000558190 LINC00173Q6ZV60 143 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 METTL26Q96S19 204 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 AFDNP55196 1824 aaKnown RBP3.05□□□□□ -1.92
ATXN3-248ENST00000558190 SMKR1H3BMG3 65 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 MRPL20Q9BYC9 149 aaKnown RBP3.05□□□□□ -1.92
ATXN3-248ENST00000558190 NABP1Q96AH0 204 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 TECTAO75443 2155 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 IGKV3D-15A0A087WSY6 115 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A9PA6NNJ1 464 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 IGKV3-15P01624 115 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 SHISA5Q8N114 240 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 ZIC4Q8N9L1 334 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 LYPD6BQ8NI32 183 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 PTPN13Q12923 2485 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 IGHV1OR21-1A0A087WYE8 117 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 PLEKHB2Q96CS7 222 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 KLF13Q9Y2Y9 288 aaPredicted RBP3.05□□□□□ -1.92
ATXN3-248ENST00000558190 PAX4O43316 350 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 NDUFB8O95169 186 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 IGKV1-5P01602 117 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF726P1Q15940 193 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 CT55Q8WUE5 264 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 IFNL4K9M1U5 179 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 HS3ST6Q96QI5 342 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF747Q9BV97 191 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 TRPM1Q7Z4N2 1603 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 WIPF3A6NGB9 483 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 D6R8Y8 96 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 MORN5Q5VZ52 161 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 S100A7L2Q5SY68 101 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 FSCN3Q9NQT6 498 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.05□□□□□ -1.92
ATXN3-248ENST00000558190 LINC01549A6NIU2 74 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF329Q86UD4 541 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 FANCMQ8IYD8 2048 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 CEP170Q5SW79 1584 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 NPYP01303 97 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 IGKV1-12A0A0C4DH73 117 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 K7EMI3 77 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 IGKV1D-12P01611 117 aa3.05□□□□□ -1.92
ATXN3-248ENST00000558190 TMEM92Q6UXU6 159 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 A0A0B4J2C4 111 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 CCL8P80075 99 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 AMN1Q8IY45 258 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 CUL9Q8IWT3 2517 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 SRD5A1P18405 259 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 C8orf86Q6ZUL3 223 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 ATRNO75882 1429 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.04□□□□□ -1.92
ATXN3-248ENST00000558190 K7ERJ3 54 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 CFC1BP0CG36 223 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 CFC1P0CG37 223 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 KLF5Q13887 457 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-248ENST00000558190 FAM159AQ6UWV7 190 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 PTH2Q96A98 100 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF503Q96F45 646 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 SCN3AQ9NY46 2000 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 NPC2P61916 151 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 TMEM14EPQ6UXP3 125 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 IGHV3OR16-8A0A075B7F1 116 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 FOXI3A8MTJ6 420 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-248ENST00000558190 TFF1P04155 84 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 ACP7Q6ZNF0 438 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 TMEM158Q8WZ71 300 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 PEBP1P30086 187 aaKnown RBP3.04□□□□□ -1.92
ATXN3-248ENST00000558190 CLEC19AQ6UXS0 136 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 LGALS1P09382 135 aaKnown RBP3.04□□□□□ -1.92
ATXN3-248ENST00000558190 IGKV3D-20A0A0C4DH25 116 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 RNASE2P10153 161 aaKnown RBP3.04□□□□□ -1.92
ATXN3-248ENST00000558190 SLC25A45Q8N413 288 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 FCN3O75636 299 aa3.04□□□□□ -1.92
ATXN3-248ENST00000558190 CFHR5Q9BXR6 569 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms