RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 ELOA3CA0A087WX78 387 aaPredicted RBP11.82□□□□□ -0.52
RPL28-205ENST00000558131 A0A1W2PS18 150 aa11.82□□□□□ -0.52
RPL28-205ENST00000558131 GABARAPH6UMI1 98 aa11.82□□□□□ -0.52
RPL28-205ENST00000558131 B3GALNT1O75752 331 aa11.82□□□□□ -0.52
RPL28-205ENST00000558131 SPP1P10451 314 aa11.82□□□□□ -0.52
RPL28-205ENST00000558131 USF2Q15853 346 aaPredicted RBP11.82□□□□□ -0.52
RPL28-205ENST00000558131 C2orf83Q53S99 150 aa11.82□□□□□ -0.52
RPL28-205ENST00000558131 C16orf54Q6UWD8 224 aa11.82□□□□□ -0.52
RPL28-205ENST00000558131 FAM219AQ8IW50 185 aa11.82□□□□□ -0.52
RPL28-205ENST00000558131 SELENOHQ8IZQ5 122 aaKnown RBP11.82□□□□□ -0.52
RPL28-205ENST00000558131 GPR146Q96CH1 333 aa11.82□□□□□ -0.52
RPL28-205ENST00000558131 RRNAD1Q96FB5 475 aaKnown RBP11.82□□□□□ -0.52
RPL28-205ENST00000558131 NAA60Q9H7X0 242 aa11.82□□□□□ -0.52
RPL28-205ENST00000558131 TEX13DA0A0J9YY54 714 aaPredicted RBP11.81□□□□□ -0.52
RPL28-205ENST00000558131 HTR2BP41595 481 aa11.81□□□□□ -0.52
RPL28-205ENST00000558131 RND2P52198 227 aa11.81□□□□□ -0.52
RPL28-205ENST00000558131 TCTAP57738 103 aa11.81□□□□□ -0.52
RPL28-205ENST00000558131 GPR107Q5VW38 600 aa11.81□□□□□ -0.52
RPL28-205ENST00000558131 MORN3Q6PF18 240 aaPredicted RBP11.81□□□□□ -0.52
RPL28-205ENST00000558131 Q6ZTC4 211 aa11.81□□□□□ -0.52
RPL28-205ENST00000558131 RBPMSQ93062 196 aaKnown RBP11.81□□□□□ -0.52
RPL28-205ENST00000558131 TMEM230Q96A57 120 aa11.81□□□□□ -0.52
RPL28-205ENST00000558131 CACNG5Q9UF02 275 aa11.81□□□□□ -0.52
RPL28-205ENST00000558131 CRYM-AS1A6NIL9 109 aa11.8□□□□□ -0.52
RPL28-205ENST00000558131 IFNA4P05014 189 aa11.8□□□□□ -0.52
RPL28-205ENST00000558131 MIFP14174 115 aa11.8□□□□□ -0.52
RPL28-205ENST00000558131 YPEL3P61236 119 aaPredicted RBP11.8□□□□□ -0.52
RPL28-205ENST00000558131 SSBP1Q04837 148 aaKnown RBP11.8□□□□□ -0.52
RPL28-205ENST00000558131 MEF2DQ14814 521 aa11.8□□□□□ -0.52
RPL28-205ENST00000558131 TMEM41BQ5BJD5 291 aa11.8□□□□□ -0.52
RPL28-205ENST00000558131 SLC24A4Q8NFF2 622 aa11.8□□□□□ -0.52
RPL28-205ENST00000558131 OR4C16Q8NGL9 310 aa11.8□□□□□ -0.52
RPL28-205ENST00000558131 OR1S2Q8NGQ3 325 aa11.8□□□□□ -0.52
RPL28-205ENST00000558131 SMIM4Q8WVI0 70 aa11.8□□□□□ -0.52
RPL28-205ENST00000558131 ENY2Q9NPA8 101 aa11.8□□□□□ -0.52
RPL28-205ENST00000558131 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.8□□□□□ -0.52
RPL28-205ENST00000558131 CLEC5AQ9NY25 188 aa11.8□□□□□ -0.52
RPL28-205ENST00000558131 CELA1Q9UNI1 258 aa11.8□□□□□ -0.52
RPL28-205ENST00000558131 GPR132Q9UNW8 380 aa11.8□□□□□ -0.52
RPL28-205ENST00000558131 TRAV30A0A087WSZ9 112 aa11.79□□□□□ -0.52
RPL28-205ENST00000558131 C11orf94C9JXX5 98 aa11.79□□□□□ -0.52
RPL28-205ENST00000558131 CTDSP2O14595 271 aa11.79□□□□□ -0.52
RPL28-205ENST00000558131 HLA-DMBP28068 263 aa11.79□□□□□ -0.52
RPL28-205ENST00000558131 OR10J1P30954 320 aa11.79□□□□□ -0.52
RPL28-205ENST00000558131 DHODHQ02127 395 aa11.79□□□□□ -0.52
RPL28-205ENST00000558131 SPCS2Q15005 226 aa11.79□□□□□ -0.52
RPL28-205ENST00000558131 SURF2Q15527 256 aaPredicted RBP11.79□□□□□ -0.52
RPL28-205ENST00000558131 ACTL10Q5JWF8 245 aa11.79□□□□□ -0.52
RPL28-205ENST00000558131 RNASE11Q8TAA1 199 aaKnown RBP11.79□□□□□ -0.52
RPL28-205ENST00000558131 RNASEH2CQ8TDP1 164 aaKnown RBP11.79□□□□□ -0.52
RPL28-205ENST00000558131 PRR13Q9NZ81 148 aa11.79□□□□□ -0.52
RPL28-205ENST00000558131 TMEM56-RWDD3S4R434 201 aa11.79□□□□□ -0.52
RPL28-205ENST00000558131 RPS10-NUDT3A0A1W2PQS6 291 aa11.78□□□□□ -0.52
RPL28-205ENST00000558131 IGLL5B9A064 214 aa11.78□□□□□ -0.52
RPL28-205ENST00000558131 HNRNPCP07910 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
RPL28-205ENST00000558131 SLC25A4P12235 298 aa11.78□□□□□ -0.52
RPL28-205ENST00000558131 DHRS2Q13268 280 aa11.78□□□□□ -0.52
RPL28-205ENST00000558131 NMSQ5H8A3 153 aa11.78□□□□□ -0.52
RPL28-205ENST00000558131 PSMG4Q5JS54 123 aa11.78□□□□□ -0.52
RPL28-205ENST00000558131 TMEM268Q5VZI3 342 aa11.78□□□□□ -0.52
RPL28-205ENST00000558131 C15orf40Q8WUR7 153 aa11.78□□□□□ -0.52
RPL28-205ENST00000558131 RAB40CQ96S21 281 aa11.78□□□□□ -0.52
RPL28-205ENST00000558131 HEYLQ9NQ87 328 aaPredicted RBP11.78□□□□□ -0.52
RPL28-205ENST00000558131 HELTA6NFD8 242 aa11.77□□□□□ -0.53
RPL28-205ENST00000558131 FAM90A26D6RGX4 464 aa11.77□□□□□ -0.53
RPL28-205ENST00000558131 CTDSPLO15194 276 aa11.77□□□□□ -0.53
RPL28-205ENST00000558131 BUB3O43684 328 aa11.77□□□□□ -0.53
RPL28-205ENST00000558131 IL4P05112 153 aa11.77□□□□□ -0.53
RPL28-205ENST00000558131 ALDH3B2P48448 385 aa11.77□□□□□ -0.53
RPL28-205ENST00000558131 MRPS10P82664 201 aaKnown RBP11.77□□□□□ -0.53
RPL28-205ENST00000558131 C14orf166Q9Y224 244 aaKnown RBP11.77□□□□□ -0.53
RPL28-205ENST00000558131 SCGB2A1O75556 95 aa11.76□□□□□ -0.53
RPL28-205ENST00000558131 TOMM40O96008 361 aa11.76□□□□□ -0.53
RPL28-205ENST00000558131 NPY1RP25929 384 aa11.76□□□□□ -0.53
RPL28-205ENST00000558131 SUPT4H1P63272 117 aaKnown RBP11.76□□□□□ -0.53
RPL28-205ENST00000558131 NPIPB3Q92617 1050 aa11.76□□□□□ -0.53
RPL28-205ENST00000558131 SCRT1Q9BWW7 348 aa11.76□□□□□ -0.53
RPL28-205ENST00000558131 TBC1D24Q9ULP9 559 aa11.76□□□□□ -0.53
RPL28-205ENST00000558131 IGHV4-4A0A075B6R2 117 aa11.75□□□□□ -0.53
RPL28-205ENST00000558131 TRAV10A0A0B4J240 114 aa11.75□□□□□ -0.53
RPL28-205ENST00000558131 ANKRD20A5PA0PJZ0 165 aa11.75□□□□□ -0.53
RPL28-205ENST00000558131 H3BMM0 161 aa11.75□□□□□ -0.53
RPL28-205ENST00000558131 RGS5O15539 181 aa11.75□□□□□ -0.53
RPL28-205ENST00000558131 AKAIN1P0CW23 69 aa11.75□□□□□ -0.53
RPL28-205ENST00000558131 C12orf74Q32Q52 190 aa11.75□□□□□ -0.53
RPL28-205ENST00000558131 GDF5OSQ5U4N7 250 aa11.75□□□□□ -0.53
RPL28-205ENST00000558131 OR51S1Q8NGJ8 323 aa11.75□□□□□ -0.53
RPL28-205ENST00000558131 Q8WTZ3 238 aa11.75□□□□□ -0.53
RPL28-205ENST00000558131 NARS2Q96I59 477 aaKnown RBP11.75□□□□□ -0.53
RPL28-205ENST00000558131 SEPSECSQ9HD40 501 aaKnown RBP11.75□□□□□ -0.53
RPL28-205ENST00000558131 NRN1Q9NPD7 142 aa11.75□□□□□ -0.53
RPL28-205ENST00000558131 HSPB7Q9UBY9 170 aa11.75□□□□□ -0.53
RPL28-205ENST00000558131 IGKV1D-37A0A075B6S9 117 aa11.74□□□□□ -0.53
RPL28-205ENST00000558131 CEBPZOSA8MTT3 80 aa11.74□□□□□ -0.53
RPL28-205ENST00000558131 DISC1C4P0D8 188 aa11.74□□□□□ -0.53
RPL28-205ENST00000558131 AMBPP02760 352 aa11.74□□□□□ -0.53
RPL28-205ENST00000558131 PSG1P11464 419 aa11.74□□□□□ -0.53
RPL28-205ENST00000558131 DEFB1P60022 68 aa11.74□□□□□ -0.53
RPL28-205ENST00000558131 SIGLEC15Q6ZMC9 328 aa11.74□□□□□ -0.53
RPL28-205ENST00000558131 ZNF767PQ75MW2 155 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms