RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 TRAV30A0A087WSZ9 112 aa11.28□□□□□ -0.6
ARHGEF40-208ENST00000557498 FAM181BA6NEQ2 426 aa11.28□□□□□ -0.6
ARHGEF40-208ENST00000557498 CYSRT1A8MQ03 144 aa11.28□□□□□ -0.6
ARHGEF40-208ENST00000557498 GNG7O60262 68 aa11.28□□□□□ -0.6
ARHGEF40-208ENST00000557498 IGLV1-40P01703 118 aa11.28□□□□□ -0.6
ARHGEF40-208ENST00000557498 TPPP2P59282 170 aa11.28□□□□□ -0.6
ARHGEF40-208ENST00000557498 ZNF90Q03938 601 aa11.28□□□□□ -0.6
ARHGEF40-208ENST00000557498 TIGITQ495A1 244 aa11.28□□□□□ -0.6
ARHGEF40-208ENST00000557498 OR10G4Q8NGN3 311 aa11.28□□□□□ -0.6
ARHGEF40-208ENST00000557498 OR10G9Q8NGN4 311 aa11.28□□□□□ -0.6
ARHGEF40-208ENST00000557498 OR10G7Q8NGN6 311 aa11.28□□□□□ -0.6
ARHGEF40-208ENST00000557498 EEF1AKMT3Q96AZ1 226 aa11.28□□□□□ -0.6
ARHGEF40-208ENST00000557498 RCC1LQ96I51 464 aaKnown RBP11.28□□□□□ -0.6
ARHGEF40-208ENST00000557498 TXN2Q99757 166 aa11.28□□□□□ -0.6
ARHGEF40-208ENST00000557498 TMEM89A2RUT3 159 aa11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 SCGB2A1O75556 95 aa11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 IGHV3-23P01764 117 aa11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 IGHG4P01861 327 aa11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 PF4V1P10720 104 aa11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 GATA2P23769 480 aaPredicted RBP11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 RPL15P61313 204 aaKnown RBP11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 ATP5G2Q06055 141 aa11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 GCSAMLQ5JQS6 135 aa11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 FAM122CQ6P4D5 195 aa11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 ZNF502Q8TBZ5 544 aa11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 JMJD8Q96S16 334 aa11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 ACTR3CQ9C0K3 210 aaPredicted RBP11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 MED9Q9NWA0 146 aa11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 ANK3Q12955 4377 aaKnown RBP11.27□□□□□ -0.61
ARHGEF40-208ENST00000557498 TRBV7-1A0A0A6YYK4 115 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 CTXND1A0A1B0GTU2 59 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 PSMB11A5LHX3 300 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 IGKV1-17P01599 117 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 FABP1P07148 127 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 H2AFB1P0C5Y9 115 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 SLC35B1P78383 322 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 ZNF726P1Q15940 193 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 Q6ZSV7 163 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 COMMD7Q86VX2 200 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 RPP25LQ8N5L8 163 aaKnown RBP11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 LYPD6BQ8NI32 183 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 USMG5Q96IX5 58 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 HRH4Q9H3N8 390 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 SLC25A22Q9H936 323 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 SERTAD4Q9NUC0 356 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 GAR1Q9NY12 217 aaKnown RBP11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 PFDN2Q9UHV9 154 aa11.26□□□□□ -0.61
ARHGEF40-208ENST00000557498 SEC14L6B5MCN3 397 aa11.25□□□□□ -0.61
ARHGEF40-208ENST00000557498 TOMM40O96008 361 aa11.25□□□□□ -0.61
ARHGEF40-208ENST00000557498 HBE1P02100 147 aa11.25□□□□□ -0.61
ARHGEF40-208ENST00000557498 CDC34P49427 236 aaPredicted RBP11.25□□□□□ -0.61
ARHGEF40-208ENST00000557498 SSX7Q7RTT5 188 aa11.25□□□□□ -0.61
ARHGEF40-208ENST00000557498 ZNF329Q86UD4 541 aa11.25□□□□□ -0.61
ARHGEF40-208ENST00000557498 MBD3L1Q8WWY6 194 aa11.25□□□□□ -0.61
ARHGEF40-208ENST00000557498 CCDC140Q96MF4 163 aa11.25□□□□□ -0.61
ARHGEF40-208ENST00000557498 ATP6V0BQ99437 205 aa11.25□□□□□ -0.61
ARHGEF40-208ENST00000557498 KLK15Q9H2R5 256 aa11.25□□□□□ -0.61
ARHGEF40-208ENST00000557498 SVEP1Q4LDE5 3571 aa11.25□□□□□ -0.61
ARHGEF40-208ENST00000557498 OR2T8A6NH00 312 aa11.24□□□□□ -0.61
ARHGEF40-208ENST00000557498 TEX46H3BTG2 121 aa11.24□□□□□ -0.61
ARHGEF40-208ENST00000557498 CRYBA1P05813 215 aa11.24□□□□□ -0.61
ARHGEF40-208ENST00000557498 PSMB8P28062 276 aa11.24□□□□□ -0.61
ARHGEF40-208ENST00000557498 GPR183P32249 361 aa11.24□□□□□ -0.61
ARHGEF40-208ENST00000557498 RAB9AP51151 201 aa11.24□□□□□ -0.61
ARHGEF40-208ENST00000557498 YPEL3P61236 119 aaPredicted RBP11.24□□□□□ -0.61
ARHGEF40-208ENST00000557498 RHOBP62745 196 aa11.24□□□□□ -0.61
ARHGEF40-208ENST00000557498 SPSB3Q6PJ21 355 aa11.24□□□□□ -0.61
ARHGEF40-208ENST00000557498 SLC7A5P1Q8MH63 180 aa11.24□□□□□ -0.61
ARHGEF40-208ENST00000557498 OR1L4Q8NGR5 311 aa11.24□□□□□ -0.61
ARHGEF40-208ENST00000557498 SFT2D1Q8WV19 159 aa11.24□□□□□ -0.61
ARHGEF40-208ENST00000557498 RAB24Q969Q5 203 aa11.24□□□□□ -0.61
ARHGEF40-208ENST00000557498 ZANQ9Y493 2812 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 TRAV1-1A0A0B4J248 108 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 A0A0G2JLM5 398 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 A0A1B0GV50 99 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 A0A1W2PPV4 95 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 MAP1LC3B2A6NCE7 125 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 NUDT19A8MXV4 375 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 NUPL2O15504 423 aaKnown RBP11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 COX7A2P2O60397 106 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 CRLF1O75462 422 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 OR5G3P0C626 314 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 RD3LP0DJH9 198 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 PSG1P11464 419 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 PLP1P60201 277 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 FOXE3Q13461 319 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 TEX38Q6PEX7 206 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 C10orf99Q6UWK7 81 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 LCN15Q6UWW0 184 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 CLEC19AQ6UXS0 136 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 IL34Q6ZMJ4 242 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 GATAD1Q8WUU5 269 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 PFDN5Q99471 154 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 RNF2Q99496 336 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 C19orf24Q9BVV8 132 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 MAP1LC3BQ9GZQ8 125 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 DOK5Q9P104 306 aa11.23□□□□□ -0.61
ARHGEF40-208ENST00000557498 EIF3GO75821 320 aaKnown RBP eCLIP11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 ELANEP08246 267 aa11.22□□□□□ -0.61
ARHGEF40-208ENST00000557498 CTSGP08311 255 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms