RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 GRAMD2BQ96HH9 432 aa10.38□□□□□ -0.75
SNX6-210ENST00000557341 BCL7BQ9BQE9 202 aa10.38□□□□□ -0.75
SNX6-210ENST00000557341 MFFQ9GZY8 342 aa10.38□□□□□ -0.75
SNX6-210ENST00000557341 CACFD1Q9UGQ2 172 aa10.38□□□□□ -0.75
SNX6-210ENST00000557341 GPR132Q9UNW8 380 aa10.38□□□□□ -0.75
SNX6-210ENST00000557341 FRAS1Q86XX4 4008 aa10.38□□□□□ -0.75
SNX6-210ENST00000557341 ANKRD20A5PA0PJZ0 165 aa10.37□□□□□ -0.75
SNX6-210ENST00000557341 K7EQG2 157 aa10.37□□□□□ -0.75
SNX6-210ENST00000557341 IGLC1P0CG04 106 aa10.37□□□□□ -0.75
SNX6-210ENST00000557341 EIF2B2P49770 351 aaKnown RBP10.37□□□□□ -0.75
SNX6-210ENST00000557341 RND2P52198 227 aa10.37□□□□□ -0.75
SNX6-210ENST00000557341 PRSS54Q6PEW0 395 aa10.37□□□□□ -0.75
SNX6-210ENST00000557341 OR51S1Q8NGJ8 323 aa10.37□□□□□ -0.75
SNX6-210ENST00000557341 DYNC2LI1Q8TCX1 351 aa10.37□□□□□ -0.75
SNX6-210ENST00000557341 IL22RA2Q969J5 263 aa10.37□□□□□ -0.75
SNX6-210ENST00000557341 GPR146Q96CH1 333 aa10.37□□□□□ -0.75
SNX6-210ENST00000557341 SCP2D1Q9UJQ7 156 aa10.37□□□□□ -0.75
SNX6-210ENST00000557341 TMEM56-RWDD3S4R434 201 aa10.37□□□□□ -0.75
SNX6-210ENST00000557341 GSTZ1O43708 216 aaPredicted RBP10.36□□□□□ -0.75
SNX6-210ENST00000557341 NOL3O60936 208 aaKnown RBP10.36□□□□□ -0.75
SNX6-210ENST00000557341 NXPH3O95157 252 aa10.36□□□□□ -0.75
SNX6-210ENST00000557341 ZNF688P0C7X2 276 aa10.36□□□□□ -0.75
SNX6-210ENST00000557341 SULT1A3P0DMM9 295 aa10.36□□□□□ -0.75
SNX6-210ENST00000557341 SULT1A4P0DMN0 295 aa10.36□□□□□ -0.75
SNX6-210ENST00000557341 NPY1RP25929 384 aa10.36□□□□□ -0.75
SNX6-210ENST00000557341 OR10J1P30954 320 aa10.36□□□□□ -0.75
SNX6-210ENST00000557341 TMBIM6P55061 237 aa10.36□□□□□ -0.75
SNX6-210ENST00000557341 RBMS2Q15434 407 aaKnown RBP10.36□□□□□ -0.75
SNX6-210ENST00000557341 TMEM41BQ5BJD5 291 aa10.36□□□□□ -0.75
SNX6-210ENST00000557341 ETFRF1Q6IPR1 90 aa10.36□□□□□ -0.75
SNX6-210ENST00000557341 NOXA1Q86UR1 476 aa10.36□□□□□ -0.75
SNX6-210ENST00000557341 C11orf45Q8TAV5 145 aa10.36□□□□□ -0.75
SNX6-210ENST00000557341 DCANP1Q8TF63 244 aa10.36□□□□□ -0.75
SNX6-210ENST00000557341 SCGB3A2Q96PL1 93 aa10.36□□□□□ -0.75
SNX6-210ENST00000557341 RSL24D1Q9UHA3 163 aaKnown RBP10.36□□□□□ -0.75
SNX6-210ENST00000557341 KCNIP3Q9Y2W7 256 aa10.36□□□□□ -0.75
SNX6-210ENST00000557341 KMT2AQ03164 3969 aa10.35□□□□□ -0.75
SNX6-210ENST00000557341 HELTA6NFD8 242 aa10.35□□□□□ -0.75
SNX6-210ENST00000557341 HNRNPCP07910 306 aaKnown RBP eCLIP10.35□□□□□ -0.757e-12■■■□□ 16.5
SNX6-210ENST00000557341 SPP1P10451 314 aa10.35□□□□□ -0.75
SNX6-210ENST00000557341 YPEL3P61236 119 aaPredicted RBP10.35□□□□□ -0.75
SNX6-210ENST00000557341 TRPT1Q86TN4 253 aaKnown RBP10.35□□□□□ -0.75
SNX6-210ENST00000557341 Q8WTZ3 238 aa10.35□□□□□ -0.75
SNX6-210ENST00000557341 MCUBQ9NWR8 336 aa10.35□□□□□ -0.75
SNX6-210ENST00000557341 FBXL17Q9UF56 701 aa10.35□□□□□ -0.75
SNX6-210ENST00000557341 IL4P05112 153 aa10.34□□□□□ -0.75
SNX6-210ENST00000557341 NANOS2P60321 138 aaKnown RBP10.34□□□□□ -0.75
SNX6-210ENST00000557341 NMSQ5H8A3 153 aa10.34□□□□□ -0.75
SNX6-210ENST00000557341 MORN3Q6PF18 240 aaPredicted RBP10.34□□□□□ -0.75
SNX6-210ENST00000557341 TMEM170AQ8WVE7 144 aa10.34□□□□□ -0.75
SNX6-210ENST00000557341 PRR13Q9NZ81 148 aa10.34□□□□□ -0.75
SNX6-210ENST00000557341 U3KQE9 123 aa10.34□□□□□ -0.75
SNX6-210ENST00000557341 A0A0B4J2A0 478 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 DEFB4AO15263 64 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 TOMM40O96008 361 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 IFNA10P01566 189 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 IFNA4P05014 189 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 ANXA3P12429 323 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 CCR6P51684 374 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 AP2S1P53680 142 aaPredicted RBP10.33□□□□□ -0.76
SNX6-210ENST00000557341 SRPXP78539 464 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 DHRS2Q13268 280 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 SMCO1Q147U7 214 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 USF2Q15853 346 aaPredicted RBP10.33□□□□□ -0.76
SNX6-210ENST00000557341 C16orf54Q6UWD8 224 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 GLMPQ8WWB7 406 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 ACY3Q96HD9 319 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 SLIRPQ9GZT3 109 aaKnown RBP10.33□□□□□ -0.76
SNX6-210ENST00000557341 HSPB7Q9UBY9 170 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 SHPKQ9UHJ6 478 aa10.33□□□□□ -0.76
SNX6-210ENST00000557341 PIGBOS1A0A0B4J2F0 54 aa10.32□□□□□ -0.76
SNX6-210ENST00000557341 KNCNA6PVL3 124 aa10.32□□□□□ -0.76
SNX6-210ENST00000557341 H3BMQ9 156 aa10.32□□□□□ -0.76
SNX6-210ENST00000557341 AKR1C4P17516 323 aa10.32□□□□□ -0.76
SNX6-210ENST00000557341 C4BPBP20851 252 aa10.32□□□□□ -0.76
SNX6-210ENST00000557341 FAUP35544 74 aaKnown RBP10.32□□□□□ -0.76
SNX6-210ENST00000557341 SUPT4H1P63272 117 aaKnown RBP10.32□□□□□ -0.76
SNX6-210ENST00000557341 PSMG4Q5JS54 123 aa10.32□□□□□ -0.76
SNX6-210ENST00000557341 ACTL10Q5JWF8 245 aa10.32□□□□□ -0.76
SNX6-210ENST00000557341 LGALS9CQ6DKI2 356 aa10.32□□□□□ -0.76
SNX6-210ENST00000557341 Q8NAQ8 132 aa10.32□□□□□ -0.76
SNX6-210ENST00000557341 DTD1Q8TEA8 209 aa10.32□□□□□ -0.76
SNX6-210ENST00000557341 NPIPB3Q92617 1050 aa10.32□□□□□ -0.76
SNX6-210ENST00000557341 U3KQ87 197 aa10.32□□□□□ -0.76
SNX6-210ENST00000557341 FABP12A6NFH5 140 aa10.31□□□□□ -0.76
SNX6-210ENST00000557341 GIG44P09565 113 aaPredicted RBP10.31□□□□□ -0.76
SNX6-210ENST00000557341 RD3LP0DJH9 198 aa10.31□□□□□ -0.76
SNX6-210ENST00000557341 MIFP14174 115 aa10.31□□□□□ -0.76
SNX6-210ENST00000557341 NUP62P37198 522 aaPredicted RBP10.31□□□□□ -0.76
SNX6-210ENST00000557341 SNRPD3P62318 126 aaKnown RBP10.31□□□□□ -0.76
SNX6-210ENST00000557341 SIGLEC15Q6ZMC9 328 aa10.31□□□□□ -0.76
SNX6-210ENST00000557341 LYZL2Q7Z4W2 148 aa10.31□□□□□ -0.76
SNX6-210ENST00000557341 LGI3Q8N145 548 aa10.31□□□□□ -0.76
SNX6-210ENST00000557341 MCFD2Q8NI22 146 aa10.31□□□□□ -0.76
SNX6-210ENST00000557341 C2CD4CQ8TF44 421 aa10.31□□□□□ -0.76
SNX6-210ENST00000557341 HRH4Q9H3N8 390 aa10.31□□□□□ -0.76
SNX6-210ENST00000557341 NRN1Q9NPD7 142 aa10.31□□□□□ -0.76
SNX6-210ENST00000557341 IGHV4-28A0A0C4DH34 117 aa10.3□□□□□ -0.76
SNX6-210ENST00000557341 ZNF705EA8MWA4 302 aaPredicted RBP10.3□□□□□ -0.76
SNX6-210ENST00000557341 FAM90A26D6RGX4 464 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms