RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 UCP3P55916 312 aa8.74□□□□□ -1.01
SNX6-209ENST00000557265 DHODHQ02127 395 aa8.74□□□□□ -1.01
SNX6-209ENST00000557265 TNP2Q05952 138 aa8.74□□□□□ -1.01
SNX6-209ENST00000557265 FAM222AQ5U5X8 452 aa8.74□□□□□ -1.01
SNX6-209ENST00000557265 SAMD12Q8N8I0 201 aa8.74□□□□□ -1.01
SNX6-209ENST00000557265 NIPSNAP3BQ9BS92 247 aa8.74□□□□□ -1.01
SNX6-209ENST00000557265 ENY2Q9NPA8 101 aa8.74□□□□□ -1.01
SNX6-209ENST00000557265 NRN1Q9NPD7 142 aa8.74□□□□□ -1.01
SNX6-209ENST00000557265 DKK2Q9UBU2 259 aa8.74□□□□□ -1.01
SNX6-209ENST00000557265 RAB26Q9ULW5 256 aa8.74□□□□□ -1.01
SNX6-209ENST00000557265 RFNGQ9Y644 331 aa8.74□□□□□ -1.01
SNX6-209ENST00000557265 LRP1BQ9NZR2 4599 aa8.73□□□□□ -1.01
SNX6-209ENST00000557265 IGLC1P0CG04 106 aa8.73□□□□□ -1.01
SNX6-209ENST00000557265 HLA-DRB4P13762 266 aa8.73□□□□□ -1.01
SNX6-209ENST00000557265 FXYD7P58549 80 aa8.73□□□□□ -1.01
SNX6-209ENST00000557265 USF2Q15853 346 aaPredicted RBP8.73□□□□□ -1.01
SNX6-209ENST00000557265 GPX8Q8TED1 209 aa8.73□□□□□ -1.01
SNX6-209ENST00000557265 SEPSECSQ9HD40 501 aaKnown RBP8.73□□□□□ -1.01
SNX6-209ENST00000557265 HLA-DRB4X5D2U9 266 aa8.73□□□□□ -1.01
SNX6-209ENST00000557265 TEX48A0A1B0GUV7 120 aa8.72□□□□□ -1.01
SNX6-209ENST00000557265 ATG12O94817 140 aa8.72□□□□□ -1.01
SNX6-209ENST00000557265 PGAM2P15259 253 aa8.72□□□□□ -1.01
SNX6-209ENST00000557265 PI3P19957 117 aa8.72□□□□□ -1.01
SNX6-209ENST00000557265 OR10J1P30954 320 aa8.72□□□□□ -1.01
SNX6-209ENST00000557265 TGFBR1P36897 503 aa8.72□□□□□ -1.01
SNX6-209ENST00000557265 NKX2-1P43699 371 aaPredicted RBP8.72□□□□□ -1.01
SNX6-209ENST00000557265 DEFB1P60022 68 aa8.72□□□□□ -1.01
SNX6-209ENST00000557265 YPEL3P61236 119 aaPredicted RBP8.72□□□□□ -1.01
SNX6-209ENST00000557265 BSXQ3C1V8 233 aa8.72□□□□□ -1.01
SNX6-209ENST00000557265 GDF5OSQ5U4N7 250 aa8.72□□□□□ -1.01
SNX6-209ENST00000557265 PRSS54Q6PEW0 395 aa8.72□□□□□ -1.01
SNX6-209ENST00000557265 TMEM88Q6PEY1 159 aa8.72□□□□□ -1.01
SNX6-209ENST00000557265 OR1S2Q8NGQ3 325 aa8.72□□□□□ -1.01
SNX6-209ENST00000557265 TP53RKQ96S44 253 aa8.72□□□□□ -1.01
SNX6-209ENST00000557265 RPS10-NUDT3A0A1W2PQS6 291 aa8.71□□□□□ -1.02
SNX6-209ENST00000557265 M0QYG6 137 aa8.71□□□□□ -1.02
SNX6-209ENST00000557265 BUB3O43684 328 aa8.71□□□□□ -1.02
SNX6-209ENST00000557265 IL4P05112 153 aa8.71□□□□□ -1.02
SNX6-209ENST00000557265 RND2P52198 227 aa8.71□□□□□ -1.02
SNX6-209ENST00000557265 RND3P61587 244 aa8.71□□□□□ -1.02
SNX6-209ENST00000557265 SIGLEC15Q6ZMC9 328 aa8.71□□□□□ -1.02
SNX6-209ENST00000557265 CROCCP3Q8IVE0 287 aa8.71□□□□□ -1.02
SNX6-209ENST00000557265 TMED3Q9Y3Q3 217 aa8.71□□□□□ -1.02
SNX6-209ENST00000557265 C3orf85A0A1B0GTC6 90 aa8.7□□□□□ -1.02
SNX6-209ENST00000557265 RPS19P39019 145 aaKnown RBP8.7□□□□□ -1.02
SNX6-209ENST00000557265 PIGPP57054 158 aa8.7□□□□□ -1.02
SNX6-209ENST00000557265 FAM3BP58499 235 aaPredicted RBP8.7□□□□□ -1.02
SNX6-209ENST00000557265 OXA1LQ15070 435 aa8.7□□□□□ -1.02
SNX6-209ENST00000557265 NEDD8Q15843 81 aa8.7□□□□□ -1.02
SNX6-209ENST00000557265 TRIM16LQ309B1 348 aa8.7□□□□□ -1.02
SNX6-209ENST00000557265 SP6Q3SY56 376 aa8.7□□□□□ -1.02
SNX6-209ENST00000557265 SNX29P2Q8IUI4 249 aa8.7□□□□□ -1.02
SNX6-209ENST00000557265 Q8N1X5 172 aa8.7□□□□□ -1.02
SNX6-209ENST00000557265 ZNF709Q8N972 641 aa8.7□□□□□ -1.02
SNX6-209ENST00000557265 RRNAD1Q96FB5 475 aaKnown RBP8.7□□□□□ -1.02
SNX6-209ENST00000557265 LINC00052Q96N35 136 aa8.7□□□□□ -1.02
SNX6-209ENST00000557265 YTHDF1Q9BYJ9 559 aaKnown RBP8.7□□□□□ -1.02
SNX6-209ENST00000557265 SAV1Q9H4B6 383 aaPredicted RBP8.7□□□□□ -1.02
SNX6-209ENST00000557265 SCPEP1Q9HB40 452 aa8.7□□□□□ -1.02
SNX6-209ENST00000557265 YTHDF2Q9Y5A9 579 aaKnown RBP8.7□□□□□ -1.02
SNX6-209ENST00000557265 A0A0G2JRQ6 117 aa8.69□□□□□ -1.02
SNX6-209ENST00000557265 LOC102723971A0A1B0GUV8 181 aa8.69□□□□□ -1.02
SNX6-209ENST00000557265 GSTZ1O43708 216 aaPredicted RBP8.69□□□□□ -1.02
SNX6-209ENST00000557265 HBE1P02100 147 aa8.69□□□□□ -1.02
SNX6-209ENST00000557265 RD3LP0DJH9 198 aa8.69□□□□□ -1.02
SNX6-209ENST00000557265 SLC25A4P12235 298 aa8.69□□□□□ -1.02
SNX6-209ENST00000557265 RCVRNP35243 200 aa8.69□□□□□ -1.02
SNX6-209ENST00000557265 HTR2BP41595 481 aa8.69□□□□□ -1.02
SNX6-209ENST00000557265 SPCS3P61009 180 aa8.69□□□□□ -1.02
SNX6-209ENST00000557265 DAD1P61803 113 aa8.69□□□□□ -1.02
SNX6-209ENST00000557265 OR4B1Q8NGF8 309 aa8.69□□□□□ -1.02
SNX6-209ENST00000557265 RNASE11Q8TAA1 199 aaKnown RBP8.69□□□□□ -1.02
SNX6-209ENST00000557265 ZNF486Q96H40 463 aaPredicted RBP8.69□□□□□ -1.02
SNX6-209ENST00000557265 ATG101Q9BSB4 218 aa8.69□□□□□ -1.02
SNX6-209ENST00000557265 SLC35B3Q9H1N7 401 aa8.69□□□□□ -1.02
SNX6-209ENST00000557265 HEYLQ9NQ87 328 aaPredicted RBP8.69□□□□□ -1.02
SNX6-209ENST00000557265 GOLT1BQ9Y3E0 138 aa8.69□□□□□ -1.02
SNX6-209ENST00000557265 HERC1Q15751 4861 aa8.69□□□□□ -1.02
SNX6-209ENST00000557265 APOBP04114 4563 aaKnown RBP8.68□□□□□ -1.02
SNX6-209ENST00000557265 NBDYA0A0U1RRE5 68 aa8.68□□□□□ -1.02
SNX6-209ENST00000557265 SMIM31A0A1B0GVY4 71 aa8.68□□□□□ -1.02
SNX6-209ENST00000557265 NXPH3O95157 252 aa8.68□□□□□ -1.02
SNX6-209ENST00000557265 C2orf83Q53S99 150 aa8.68□□□□□ -1.02
SNX6-209ENST00000557265 FOXI2Q6ZQN5 318 aa8.68□□□□□ -1.02
SNX6-209ENST00000557265 C1orf158Q8N1D5 194 aa8.68□□□□□ -1.02
SNX6-209ENST00000557265 C6orf223Q8N319 242 aa8.68□□□□□ -1.02
SNX6-209ENST00000557265 OR51G1Q8NGK1 321 aa8.68□□□□□ -1.02
SNX6-209ENST00000557265 RNASEH2CQ8TDP1 164 aaKnown RBP8.68□□□□□ -1.02
SNX6-209ENST00000557265 NPIPB3Q92617 1050 aa8.68□□□□□ -1.02
SNX6-209ENST00000557265 ACY3Q96HD9 319 aa8.68□□□□□ -1.02
SNX6-209ENST00000557265 C7orf50Q9BRJ6 194 aaKnown RBP8.68□□□□□ -1.02
SNX6-209ENST00000557265 WDR12Q9GZL7 423 aaKnown RBP8.68□□□□□ -1.02
SNX6-209ENST00000557265 SCRT2Q9NQ03 307 aa8.68□□□□□ -1.02
SNX6-209ENST00000557265 DNAH5Q8TE73 4624 aa8.68□□□□□ -1.02
SNX6-209ENST00000557265 TOMM40O96008 361 aa8.67□□□□□ -1.02
SNX6-209ENST00000557265 PSG1P11464 419 aa8.67□□□□□ -1.02
SNX6-209ENST00000557265 ID1P41134 155 aa8.67□□□□□ -1.02
SNX6-209ENST00000557265 LSM3P62310 102 aaKnown RBP8.67□□□□□ -1.02
SNX6-209ENST00000557265 PSG9Q00887 426 aa8.67□□□□□ -1.02
SNX6-209ENST00000557265 RRN3P1Q2M238 152 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms